RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 TFF3Q07654 80 aa11.49□□□□□ -0.57
SF1-202ENST00000334944 VKORC1L1Q8N0U8 176 aa11.49□□□□□ -0.57
SF1-202ENST00000334944 CLUHP3Q96NS8 147 aa11.49□□□□□ -0.57
SF1-202ENST00000334944 SH3BGRL2Q9UJC5 107 aa11.49□□□□□ -0.57
SF1-202ENST00000334944 CUL9Q8IWT3 2517 aa11.48□□□□□ -0.57
SF1-202ENST00000334944 NPIPB11E5RHQ5 1161 aa11.48□□□□□ -0.57
SF1-202ENST00000334944 EDDM3BP56851 147 aa11.48□□□□□ -0.57
SF1-202ENST00000334944 SERF2P84101 59 aa11.48□□□□□ -0.57
SF1-202ENST00000334944 PLSCR4Q9NRQ2 329 aa11.48□□□□□ -0.57
SF1-202ENST00000334944 TRAV38-1A0A0B4J264 116 aa11.48□□□□□ -0.57
SF1-202ENST00000334944 ASPHD1Q5U4P2 390 aa11.48□□□□□ -0.57
SF1-202ENST00000334944 DUX4L9Q6RFH8 374 aaPredicted RBP11.48□□□□□ -0.57
SF1-202ENST00000334944 ZNF474Q6S9Z5 364 aaPredicted RBP11.48□□□□□ -0.57
SF1-202ENST00000334944 IGFL2Q6UWQ7 119 aa11.48□□□□□ -0.57
SF1-202ENST00000334944 ZNF645Q8N7E2 425 aa11.48□□□□□ -0.57
SF1-202ENST00000334944 MEGF9Q9H1U4 602 aa11.48□□□□□ -0.57
SF1-202ENST00000334944 SLC35D1Q9NTN3 355 aa11.48□□□□□ -0.57
SF1-202ENST00000334944 DPRXA6NFQ7 191 aa11.47□□□□□ -0.57
SF1-202ENST00000334944 OOEPA6NGQ2 149 aa11.47□□□□□ -0.57
SF1-202ENST00000334944 ZG16O60844 167 aa11.47□□□□□ -0.57
SF1-202ENST00000334944 AMMECR1LQ6DCA0 310 aa11.47□□□□□ -0.57
SF1-202ENST00000334944 ZADH2Q8N4Q0 377 aa11.47□□□□□ -0.57
SF1-202ENST00000334944 DEFB108BQ8NET1 73 aa11.47□□□□□ -0.57
SF1-202ENST00000334944 PSMG3Q9BT73 122 aaPredicted RBP11.47□□□□□ -0.57
SF1-202ENST00000334944 SEPSECSQ9HD40 501 aaKnown RBP11.47□□□□□ -0.57
SF1-202ENST00000334944 IL19Q9UHD0 177 aa11.47□□□□□ -0.57
SF1-202ENST00000334944 J3QW42 95 aa11.47□□□□□ -0.57
SF1-202ENST00000334944 PRDX2P32119 198 aa11.47□□□□□ -0.57
SF1-202ENST00000334944 TCL1AP56279 114 aa11.47□□□□□ -0.57
SF1-202ENST00000334944 MOGAT3Q86VF5 341 aa11.47□□□□□ -0.57
SF1-202ENST00000334944 LSM10Q969L4 123 aaKnown RBP11.47□□□□□ -0.57
SF1-202ENST00000334944 HSPB7Q9UBY9 170 aa11.47□□□□□ -0.57
SF1-202ENST00000334944 ZNF891A8MT65 544 aaPredicted RBP11.46□□□□□ -0.57
SF1-202ENST00000334944 RAB29O14966 203 aa11.46□□□□□ -0.57
SF1-202ENST00000334944 ZNF253O75346 499 aa11.46□□□□□ -0.57
SF1-202ENST00000334944 CGAP01215 116 aa11.46□□□□□ -0.57
SF1-202ENST00000334944 HBG1P69891 147 aa11.46□□□□□ -0.57
SF1-202ENST00000334944 HBG2P69892 147 aa11.46□□□□□ -0.57
SF1-202ENST00000334944 SMIM21Q3B7S5 101 aa11.46□□□□□ -0.57
SF1-202ENST00000334944 MPV17L2Q567V2 206 aa11.46□□□□□ -0.57
SF1-202ENST00000334944 Q56UQ5 140 aa11.46□□□□□ -0.57
SF1-202ENST00000334944 PINX1Q96BK5 328 aaKnown RBP11.46□□□□□ -0.57
SF1-202ENST00000334944 GNG12Q9UBI6 72 aa11.46□□□□□ -0.57
SF1-202ENST00000334944 DSCAMO60469 2012 aa11.46□□□□□ -0.57
SF1-202ENST00000334944 TACC2O95359 2948 aa11.46□□□□□ -0.57
SF1-202ENST00000334944 IGKV1D-17A0A075B6S4 117 aa11.46□□□□□ -0.57
SF1-202ENST00000334944 CTXND1A0A1B0GTU2 59 aa11.46□□□□□ -0.57
SF1-202ENST00000334944 OR2V2Q96R30 315 aa11.46□□□□□ -0.57
SF1-202ENST00000334944 FAM215AQ9Y5M1 114 aa11.46□□□□□ -0.57
SF1-202ENST00000334944 PTPRBP23467 1997 aa11.46□□□□□ -0.58
SF1-202ENST00000334944 KLK10O43240 276 aa11.46□□□□□ -0.58
SF1-202ENST00000334944 CIDEAO60543 219 aa11.46□□□□□ -0.58
SF1-202ENST00000334944 YPEL3P61236 119 aaPredicted RBP11.46□□□□□ -0.58
SF1-202ENST00000334944 FAM27E3Q08E93 113 aa11.46□□□□□ -0.58
SF1-202ENST00000334944 SLC35E4Q6ICL7 350 aa11.46□□□□□ -0.58
SF1-202ENST00000334944 OCC1Q8TAD7 63 aa11.46□□□□□ -0.58
SF1-202ENST00000334944 SLC25A15Q9Y619 301 aa11.46□□□□□ -0.58
SF1-202ENST00000334944 HCFC1P51610 2035 aa11.45□□□□□ -0.58
SF1-202ENST00000334944 A0A1W2PS18 150 aa11.45□□□□□ -0.58
SF1-202ENST00000334944 FOXL1Q12952 345 aa11.45□□□□□ -0.58
SF1-202ENST00000334944 RPL39P5Q59GN2 51 aa11.45□□□□□ -0.58
SF1-202ENST00000334944 PRR27Q6MZM9 219 aa11.45□□□□□ -0.58
SF1-202ENST00000334944 NEUROG1Q92886 237 aa11.45□□□□□ -0.58
SF1-202ENST00000334944 ZNF430Q9H8G1 570 aaPredicted RBP11.45□□□□□ -0.58
SF1-202ENST00000334944 NAT8BQ9UHF3 227 aa11.45□□□□□ -0.58
SF1-202ENST00000334944 AHRRA9YTQ3 701 aa11.45□□□□□ -0.58
SF1-202ENST00000334944 IGLV1-44P01699 117 aa11.45□□□□□ -0.58
SF1-202ENST00000334944 OR8I2Q8N0Y5 310 aa11.45□□□□□ -0.58
SF1-202ENST00000334944 OR10G8Q8NGN5 311 aa11.45□□□□□ -0.58
SF1-202ENST00000334944 CHTOPQ9Y3Y2 248 aaKnown RBP11.45□□□□□ -0.58
SF1-202ENST00000334944 TNCP24821 2201 aa11.45□□□□□ -0.58
SF1-202ENST00000334944 TRAV30A0A087WSZ9 112 aa11.44□□□□□ -0.58
SF1-202ENST00000334944 FCGR3BO75015 233 aa11.44□□□□□ -0.58
SF1-202ENST00000334944 PROP1O75360 226 aa11.44□□□□□ -0.58
SF1-202ENST00000334944 MMP23AO75900 390 aa11.44□□□□□ -0.58
SF1-202ENST00000334944 VENTXO95231 258 aa11.44□□□□□ -0.58
SF1-202ENST00000334944 ZCCHC24Q8N2G6 241 aaKnown RBP11.44□□□□□ -0.58
SF1-202ENST00000334944 CLEC7AQ9BXN2 247 aa11.44□□□□□ -0.58
SF1-202ENST00000334944 WASHC3Q9Y3C0 194 aa11.44□□□□□ -0.58
SF1-202ENST00000334944 SCO2A0A1W2PP80 73 aa11.44□□□□□ -0.58
SF1-202ENST00000334944 TMEM108Q6UXF1 575 aa11.44□□□□□ -0.58
SF1-202ENST00000334944 GCSAMQ8N6F7 178 aa11.44□□□□□ -0.58
SF1-202ENST00000334944 CLDN14O95500 239 aa11.44□□□□□ -0.58
SF1-202ENST00000334944 H2BFWTQ7Z2G1 175 aa11.44□□□□□ -0.58
SF1-202ENST00000334944 TCTEX1D1Q8N7M0 179 aa11.44□□□□□ -0.58
SF1-202ENST00000334944 ITLN1Q8WWA0 313 aa11.44□□□□□ -0.58
SF1-202ENST00000334944 CORO2AQ92828 525 aa11.44□□□□□ -0.58
SF1-202ENST00000334944 IGF2RP11717 2491 aa11.43□□□□□ -0.58
SF1-202ENST00000334944 IGLC7A0M8Q6 106 aa11.43□□□□□ -0.58
SF1-202ENST00000334944 LRRC30A6NM36 301 aa11.43□□□□□ -0.58
SF1-202ENST00000334944 SLC25A6P12236 298 aa11.43□□□□□ -0.58
SF1-202ENST00000334944 ZNF134P52741 427 aa11.43□□□□□ -0.58
SF1-202ENST00000334944 NIT1Q86X76 327 aa11.43□□□□□ -0.58
SF1-202ENST00000334944 C1orf162Q8NEQ5 155 aaPredicted RBP11.43□□□□□ -0.58
SF1-202ENST00000334944 SNRNP40Q96DI7 357 aaKnown RBP11.43□□□□□ -0.58
SF1-202ENST00000334944 NCOR1P1Q9H4R4 102 aa11.43□□□□□ -0.58
SF1-202ENST00000334944 RNF212BA8MTL3 300 aa11.43□□□□□ -0.58
SF1-202ENST00000334944 IGLL1P15814 213 aa11.43□□□□□ -0.58
SF1-202ENST00000334944 SRIP30626 198 aa11.43□□□□□ -0.58
SF1-202ENST00000334944 SPINT2O43291 252 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms