RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 LINC00299Q6ZSB3 139 aa10.77□□□□□ -0.69
LIMS1-201ENST00000332345 SELENOHQ8IZQ5 122 aaKnown RBP10.77□□□□□ -0.69
LIMS1-201ENST00000332345 RBPMSQ93062 196 aaKnown RBP10.77□□□□□ -0.69
LIMS1-201ENST00000332345 PDCD10Q9BUL8 212 aa10.77□□□□□ -0.69
LIMS1-201ENST00000332345 A0A0B4J293 547 aa10.76□□□□□ -0.69
LIMS1-201ENST00000332345 IFNA17P01571 189 aa10.76□□□□□ -0.69
LIMS1-201ENST00000332345 P0C879 139 aa10.76□□□□□ -0.69
LIMS1-201ENST00000332345 KRTAP10-11P60412 298 aa10.76□□□□□ -0.69
LIMS1-201ENST00000332345 PRCDQ00LT1 54 aa10.76□□□□□ -0.69
LIMS1-201ENST00000332345 IZUMO4Q1ZYL8 232 aa10.76□□□□□ -0.69
LIMS1-201ENST00000332345 TMEM268Q5VZI3 342 aa10.76□□□□□ -0.69
LIMS1-201ENST00000332345 ACSM6Q6P461 480 aa10.76□□□□□ -0.69
LIMS1-201ENST00000332345 IL22RA2Q969J5 263 aa10.76□□□□□ -0.69
LIMS1-201ENST00000332345 OR4C12Q96R67 309 aa10.76□□□□□ -0.69
LIMS1-201ENST00000332345 AURKAIP1Q9NWT8 199 aaPredicted RBP10.76□□□□□ -0.69
LIMS1-201ENST00000332345 F11RQ9Y624 299 aaKnown RBP10.76□□□□□ -0.69
LIMS1-201ENST00000332345 TMEM56-RWDD3S4R434 201 aa10.76□□□□□ -0.69
LIMS1-201ENST00000332345 GGCTO75223 188 aaKnown RBP10.75□□□□□ -0.69
LIMS1-201ENST00000332345 SAP30O75446 220 aa10.75□□□□□ -0.69
LIMS1-201ENST00000332345 TRBV12-3P01733 135 aa10.75□□□□□ -0.69
LIMS1-201ENST00000332345 SRPXP78539 464 aa10.75□□□□□ -0.69
LIMS1-201ENST00000332345 TMEM187Q14656 261 aa10.75□□□□□ -0.69
LIMS1-201ENST00000332345 TMEM128Q5BJH2 165 aa10.75□□□□□ -0.69
LIMS1-201ENST00000332345 TMED4Q7Z7H5 227 aa10.75□□□□□ -0.69
LIMS1-201ENST00000332345 VN1R17PQ8TDU5 208 aa10.75□□□□□ -0.69
LIMS1-201ENST00000332345 TMEM230Q96A57 120 aa10.75□□□□□ -0.69
LIMS1-201ENST00000332345 SDHCQ99643 169 aaPredicted RBP10.75□□□□□ -0.69
LIMS1-201ENST00000332345 C7orf50Q9BRJ6 194 aaKnown RBP10.75□□□□□ -0.69
LIMS1-201ENST00000332345 PLEKHA3Q9HB20 300 aa10.75□□□□□ -0.69
LIMS1-201ENST00000332345 BATF3Q9NR55 127 aa10.75□□□□□ -0.69
LIMS1-201ENST00000332345 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.75□□□□□ -0.69
LIMS1-201ENST00000332345 CACFD1Q9UGQ2 172 aa10.75□□□□□ -0.69
LIMS1-201ENST00000332345 SORL1Q92673 2214 aa10.74□□□□□ -0.69
LIMS1-201ENST00000332345 BMPR1BO00238 502 aa10.74□□□□□ -0.69
LIMS1-201ENST00000332345 ST8SIA3O43173 380 aa10.74□□□□□ -0.69
LIMS1-201ENST00000332345 CLEC3BP05452 202 aa10.74□□□□□ -0.69
LIMS1-201ENST00000332345 IL7P13232 177 aa10.74□□□□□ -0.69
LIMS1-201ENST00000332345 SYNJ2BPP57105 145 aa10.74□□□□□ -0.69
LIMS1-201ENST00000332345 RBMS2Q15434 407 aaKnown RBP10.74□□□□□ -0.69
LIMS1-201ENST00000332345 CNPY1Q3B7I2 92 aa10.74□□□□□ -0.69
LIMS1-201ENST00000332345 CLEC19AQ6UXS0 136 aa10.74□□□□□ -0.69
LIMS1-201ENST00000332345 LGI3Q8N145 548 aa10.74□□□□□ -0.69
LIMS1-201ENST00000332345 OR2C3Q8N628 320 aa10.74□□□□□ -0.69
LIMS1-201ENST00000332345 SLC35G3Q8N808 338 aa10.74□□□□□ -0.69
LIMS1-201ENST00000332345 OR9G4Q8NGQ1 327 aa10.74□□□□□ -0.69
LIMS1-201ENST00000332345 OR1P1Q8NH06 330 aa10.74□□□□□ -0.69
LIMS1-201ENST00000332345 LHFPL5Q8TAF8 219 aa10.74□□□□□ -0.69
LIMS1-201ENST00000332345 ENY2Q9NPA8 101 aa10.74□□□□□ -0.69
LIMS1-201ENST00000332345 DNAH3Q8TD57 4116 aa10.73□□□□□ -0.69
LIMS1-201ENST00000332345 LINC00854A0A1B0GVQ3 168 aa10.73□□□□□ -0.69
LIMS1-201ENST00000332345 IGHV3-23P01764 117 aa10.73□□□□□ -0.69
LIMS1-201ENST00000332345 ARL3P36405 182 aa10.73□□□□□ -0.69
LIMS1-201ENST00000332345 SNCAP37840 140 aa10.73□□□□□ -0.69
LIMS1-201ENST00000332345 SUB1P53999 127 aaKnown RBP eCLIP10.73□□□□□ -0.69
LIMS1-201ENST00000332345 SUPT4H1P63272 117 aaKnown RBP10.73□□□□□ -0.69
LIMS1-201ENST00000332345 Q6ZRM9 215 aa10.73□□□□□ -0.69
LIMS1-201ENST00000332345 OR52E5Q8NH55 327 aa10.73□□□□□ -0.69
LIMS1-201ENST00000332345 MRAPQ8TCY5 172 aa10.73□□□□□ -0.69
LIMS1-201ENST00000332345 S100ZQ8WXG8 99 aa10.73□□□□□ -0.69
LIMS1-201ENST00000332345 GPR146Q96CH1 333 aa10.73□□□□□ -0.69
LIMS1-201ENST00000332345 PEMTQ9UBM1 199 aa10.73□□□□□ -0.69
LIMS1-201ENST00000332345 DMRT1Q9Y5R6 373 aa10.73□□□□□ -0.69
LIMS1-201ENST00000332345 A0A0B4J2A0 478 aa10.72□□□□□ -0.69
LIMS1-201ENST00000332345 A0A0G2JRQ6 117 aa10.72□□□□□ -0.69
LIMS1-201ENST00000332345 PPP5D1E7EU14 171 aa10.72□□□□□ -0.69
LIMS1-201ENST00000332345 INS-IGF2F8WCM5 200 aa10.72□□□□□ -0.69
LIMS1-201ENST00000332345 OR2C1O95371 312 aa10.72□□□□□ -0.69
LIMS1-201ENST00000332345 CCR6P51684 374 aa10.72□□□□□ -0.69
LIMS1-201ENST00000332345 SPCS3P61009 180 aa10.72□□□□□ -0.69
LIMS1-201ENST00000332345 FAM106AQ4KMX7 169 aa10.72□□□□□ -0.69
LIMS1-201ENST00000332345 GPHB5Q86YW7 130 aa10.72□□□□□ -0.69
LIMS1-201ENST00000332345 CENPSQ8N2Z9 138 aa10.72□□□□□ -0.69
LIMS1-201ENST00000332345 ZNF114Q8NC26 417 aa10.72□□□□□ -0.69
LIMS1-201ENST00000332345 ZNF502Q8TBZ5 544 aa10.72□□□□□ -0.69
LIMS1-201ENST00000332345 CCDC140Q96MF4 163 aa10.72□□□□□ -0.69
LIMS1-201ENST00000332345 ATP6V0BQ99437 205 aa10.72□□□□□ -0.69
LIMS1-201ENST00000332345 CACNG5Q9UF02 275 aa10.72□□□□□ -0.69
LIMS1-201ENST00000332345 SHPKQ9UHJ6 478 aa10.72□□□□□ -0.69
LIMS1-201ENST00000332345 S4R3C0 116 aa10.72□□□□□ -0.69
LIMS1-201ENST00000332345 WI2-2373I1.2A0A1W2PRP0 233 aa10.71□□□□□ -0.69
LIMS1-201ENST00000332345 MFSD2BA6NFX1 497 aa10.71□□□□□ -0.69
LIMS1-201ENST00000332345 NDUFB6O95139 128 aa10.71□□□□□ -0.69
LIMS1-201ENST00000332345 SULT1A3P0DMM9 295 aa10.71□□□□□ -0.69
LIMS1-201ENST00000332345 SULT1A4P0DMN0 295 aa10.71□□□□□ -0.69
LIMS1-201ENST00000332345 VAMP1P23763 118 aa10.71□□□□□ -0.69
LIMS1-201ENST00000332345 HOXA1P49639 335 aaPredicted RBP10.71□□□□□ -0.69
LIMS1-201ENST00000332345 MFAP2P55001 183 aa10.71□□□□□ -0.69
LIMS1-201ENST00000332345 UBE2MP61081 183 aaKnown RBP10.71□□□□□ -0.69
LIMS1-201ENST00000332345 DCTN2Q13561 401 aaKnown RBP10.71□□□□□ -0.69
LIMS1-201ENST00000332345 AARDQ4LEZ3 155 aa10.71□□□□□ -0.69
LIMS1-201ENST00000332345 SPINK9Q5DT21 86 aa10.71□□□□□ -0.69
LIMS1-201ENST00000332345 DEFB121Q5J5C9 76 aa10.71□□□□□ -0.69
LIMS1-201ENST00000332345 LYZL2Q7Z4W2 148 aa10.71□□□□□ -0.69
LIMS1-201ENST00000332345 MISP3Q96FF7 219 aa10.71□□□□□ -0.69
LIMS1-201ENST00000332345 CCDC32Q9BV29 185 aa10.71□□□□□ -0.69
LIMS1-201ENST00000332345 GAR1Q9NY12 217 aaKnown RBP10.71□□□□□ -0.69
LIMS1-201ENST00000332345 SIGLEC8Q9NYZ4 499 aa10.71□□□□□ -0.69
LIMS1-201ENST00000332345 DUXBA0A1W2PPF3 345 aa10.7□□□□□ -0.7
LIMS1-201ENST00000332345 SFT2D2O95562 160 aa10.7□□□□□ -0.7
LIMS1-201ENST00000332345 HLA-AP01891 365 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms