RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 PRR19A6NJB7 356 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 IFNL4K9M1U5 179 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 ARF6P62330 175 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 RPL30P62888 115 aaKnown RBP11.78□□□□□ -0.52
EPHB3-201ENST00000330394 PSG7Q13046 419 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 SPATA31B1PQ5VZV4 182 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 GOLT1AQ6ZVE7 132 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 GUCD1Q96NT3 240 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 HSPB7Q9UBY9 170 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 WDR83OSQ9Y284 106 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 HILPDAQ9Y5L2 63 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 INSIG2Q9Y5U4 225 aa11.78□□□□□ -0.52
EPHB3-201ENST00000330394 RPL7P18124 248 aaKnown RBP11.77□□□□□ -0.52
EPHB3-201ENST00000330394 PTGDSP41222 190 aa11.77□□□□□ -0.52
EPHB3-201ENST00000330394 BHLHA15Q7RTS1 189 aaPredicted RBP11.77□□□□□ -0.52
EPHB3-201ENST00000330394 ZNF430Q9H8G1 570 aaPredicted RBP11.77□□□□□ -0.52
EPHB3-201ENST00000330394 KLF7O75840 302 aaPredicted RBP11.77□□□□□ -0.53
EPHB3-201ENST00000330394 COX5BP10606 129 aa11.77□□□□□ -0.53
EPHB3-201ENST00000330394 IL15RAQ13261 267 aa11.77□□□□□ -0.53
EPHB3-201ENST00000330394 ACTL10Q5JWF8 245 aa11.77□□□□□ -0.53
EPHB3-201ENST00000330394 C20orf204Q6ZNR8 217 aa11.77□□□□□ -0.53
EPHB3-201ENST00000330394 C18orf15Q96N68 181 aa11.77□□□□□ -0.53
EPHB3-201ENST00000330394 PRR14LQ5THK1 2151 aa11.77□□□□□ -0.53
EPHB3-201ENST00000330394 CKS2P33552 79 aa11.77□□□□□ -0.53
EPHB3-201ENST00000330394 HBBP68871 147 aa11.77□□□□□ -0.53
EPHB3-201ENST00000330394 SRSF9Q13242 221 aaKnown RBP eCLIP11.77□□□□□ -0.53
EPHB3-201ENST00000330394 TBR1Q16650 682 aa11.77□□□□□ -0.53
EPHB3-201ENST00000330394 FAM214BQ7L5A3 538 aa11.77□□□□□ -0.53
EPHB3-201ENST00000330394 ELOVL5Q9NYP7 299 aa11.77□□□□□ -0.53
EPHB3-201ENST00000330394 CRIM1Q9NZV1 1036 aa11.77□□□□□ -0.53
EPHB3-201ENST00000330394 TANC1Q9C0D5 1861 aa11.76□□□□□ -0.53
EPHB3-201ENST00000330394 BDP1A6H8Y1 2624 aa11.76□□□□□ -0.53
EPHB3-201ENST00000330394 IGKV3-7A0A075B6H7 116 aa11.76□□□□□ -0.53
EPHB3-201ENST00000330394 EFNB3Q15768 340 aa11.76□□□□□ -0.53
EPHB3-201ENST00000330394 SNRNP40Q96DI7 357 aaKnown RBP11.76□□□□□ -0.53
EPHB3-201ENST00000330394 OR9G9P0C7N8 305 aa11.76□□□□□ -0.53
EPHB3-201ENST00000330394 CDKN1AP38936 164 aa11.76□□□□□ -0.53
EPHB3-201ENST00000330394 SEPSECSQ9HD40 501 aaKnown RBP11.76□□□□□ -0.53
EPHB3-201ENST00000330394 PEF1Q9UBV8 284 aaKnown RBP11.76□□□□□ -0.53
EPHB3-201ENST00000330394 HIGD1AQ9Y241 93 aa11.76□□□□□ -0.53
EPHB3-201ENST00000330394 FREM1Q5H8C1 2179 aa11.76□□□□□ -0.53
EPHB3-201ENST00000330394 DENND4CQ5VZ89 1909 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 ZNF716A6NP11 495 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 LILRA1O75019 489 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 SELENOTP62341 195 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 GNG5P63218 68 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 LHFPL4Q7Z7J7 247 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 GTF3C1Q12789 2109 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 ARFGEF3Q5TH69 2177 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 PYYP10082 97 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 RPL27AP46776 148 aaKnown RBP11.75□□□□□ -0.53
EPHB3-201ENST00000330394 RIPPLY3P57055 190 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 TWIST1Q15672 202 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 ATP1A1-AS1Q5TC04 95 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 FNDC1Q4ZHG4 1894 aaPredicted RBP11.75□□□□□ -0.53
EPHB3-201ENST00000330394 IGHV3-35A0A0C4DH35 117 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 H3BVH4 76 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 CA7P43166 264 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 Q5PR19 223 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 LINC00305Q7Z4B0 112 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 PPP1R32Q7Z5V6 425 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 SAP25Q8TEE9 199 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 IMMP1LQ96LU5 166 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 MCRIP2Q9BUT9 160 aaKnown RBP11.75□□□□□ -0.53
EPHB3-201ENST00000330394 COL25A1Q9BXS0 654 aaPredicted RBP11.75□□□□□ -0.53
EPHB3-201ENST00000330394 SLC25A10Q9UBX3 287 aaPredicted RBP11.75□□□□□ -0.53
EPHB3-201ENST00000330394 DLL1O00548 723 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 PPIHO43447 177 aaKnown RBP11.75□□□□□ -0.53
EPHB3-201ENST00000330394 OR10AG1Q8NH19 301 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 JPT1Q9UK76 154 aa11.75□□□□□ -0.53
EPHB3-201ENST00000330394 TRAV9-2A0A087WT02 112 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 IGKV1-6A0A0C4DH72 117 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 LIPFP07098 398 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 C3orf79P0CE67 100 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 HOXA4Q00056 320 aaPredicted RBP11.74□□□□□ -0.53
EPHB3-201ENST00000330394 FOXL1Q12952 345 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 TMEM108Q6UXF1 575 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 TREML4Q6UXN2 200 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 FNDC4Q9H6D8 234 aaPredicted RBP11.74□□□□□ -0.53
EPHB3-201ENST00000330394 F5H697 171 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 MKRN2OSH3BPM6 223 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 PAX9P55771 341 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 IGLV3-12A0A075B6K2 115 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 LOC107984156A0A0G2JMH3 177 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 H3BUT2 72 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 PSPNO60542 156 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 UMODP07911 640 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 NBEAP1P0C6P0 100 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 SELLP14151 372 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 ZNF726P1Q15940 193 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 TMEM14EPQ6UXP3 125 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 ACP7Q6ZNF0 438 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 ARL17AQ8IVW1 177 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 ARL6IP6Q8N6S5 226 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 OR9G1Q8NH87 305 aa11.74□□□□□ -0.53
EPHB3-201ENST00000330394 PEX7O00628 323 aa11.73□□□□□ -0.53
EPHB3-201ENST00000330394 C1orf174Q8IYL3 243 aa11.73□□□□□ -0.53
EPHB3-201ENST00000330394 AGMATQ9BSE5 352 aa11.73□□□□□ -0.53
EPHB3-201ENST00000330394 GGTLC1Q9BX51 225 aa11.73□□□□□ -0.53
EPHB3-201ENST00000330394 THYN1Q9P016 225 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms