RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 F11RQ9Y624 299 aaKnown RBP21.01■□□□□ 0.95
ATPAF1-201ENST00000329231 DBX1A6NMT0 343 aa21■□□□□ 0.95
ATPAF1-201ENST00000329231 LGALS9O00182 355 aa21■□□□□ 0.95
ATPAF1-201ENST00000329231 ATG12O94817 140 aa21■□□□□ 0.95
ATPAF1-201ENST00000329231 CLEC3BP05452 202 aa21■□□□□ 0.95
ATPAF1-201ENST00000329231 FAUP35544 74 aaKnown RBP21■□□□□ 0.95
ATPAF1-201ENST00000329231 LCN12Q6JVE5 192 aa21■□□□□ 0.95
ATPAF1-201ENST00000329231 OR1L6Q8NGR2 347 aa21■□□□□ 0.95
ATPAF1-201ENST00000329231 ZNF502Q8TBZ5 544 aa21■□□□□ 0.95
ATPAF1-201ENST00000329231 VN1R17PQ8TDU5 208 aa21■□□□□ 0.95
ATPAF1-201ENST00000329231 A6NHS1 94 aa20.99■□□□□ 0.95
ATPAF1-201ENST00000329231 B3GALNT1O75752 331 aa20.99■□□□□ 0.95
ATPAF1-201ENST00000329231 FAM106AQ4KMX7 169 aa20.99■□□□□ 0.95
ATPAF1-201ENST00000329231 DEDD2Q8WXF8 326 aa20.99■□□□□ 0.95
ATPAF1-201ENST00000329231 RTBDNQ9BSG5 229 aaPredicted RBP20.99■□□□□ 0.95
ATPAF1-201ENST00000329231 GPR132Q9UNW8 380 aa20.99■□□□□ 0.95
ATPAF1-201ENST00000329231 OR2K2Q8NGT1 345 aa20.98■□□□□ 0.95
ATPAF1-201ENST00000329231 C5orf66Q9H5L9 145 aa20.98■□□□□ 0.95
ATPAF1-201ENST00000329231 AKR1C2P52895 323 aa20.97■□□□□ 0.95
ATPAF1-201ENST00000329231 TRIM16LQ309B1 348 aa20.97■□□□□ 0.95
ATPAF1-201ENST00000329231 SCGB3A2Q96PL1 93 aa20.97■□□□□ 0.95
ATPAF1-201ENST00000329231 C2orf70A6NJV1 201 aa20.96■□□□□ 0.95
ATPAF1-201ENST00000329231 GPR183P32249 361 aa20.96■□□□□ 0.95
ATPAF1-201ENST00000329231 HSPE1P61604 102 aaKnown RBP20.96■□□□□ 0.95
ATPAF1-201ENST00000329231 PRCDQ00LT1 54 aa20.96■□□□□ 0.95
ATPAF1-201ENST00000329231 SP6Q3SY56 376 aa20.96■□□□□ 0.95
ATPAF1-201ENST00000329231 DYNLRB2Q8TF09 96 aa20.96■□□□□ 0.95
ATPAF1-201ENST00000329231 ZNF320A2RRD8 509 aa20.95■□□□□ 0.94
ATPAF1-201ENST00000329231 IGKV1-5P01602 117 aa20.95■□□□□ 0.94
ATPAF1-201ENST00000329231 UCP1P25874 307 aa20.95■□□□□ 0.94
ATPAF1-201ENST00000329231 MFAP2P55001 183 aa20.95■□□□□ 0.94
ATPAF1-201ENST00000329231 PLET1Q6UQ28 207 aa20.95■□□□□ 0.94
ATPAF1-201ENST00000329231 ADAMTSL5Q6ZMM2 481 aa20.95■□□□□ 0.94
ATPAF1-201ENST00000329231 OR1P1Q8NH06 330 aa20.95■□□□□ 0.94
ATPAF1-201ENST00000329231 ASCL2Q99929 193 aa20.95■□□□□ 0.94
ATPAF1-201ENST00000329231 DNAH9Q9NYC9 4486 aa20.95■□□□□ 0.94
ATPAF1-201ENST00000329231 FOLR2P14207 255 aa20.94■□□□□ 0.94
ATPAF1-201ENST00000329231 ZNF57Q68EA5 555 aaPredicted RBP20.94■□□□□ 0.94
ATPAF1-201ENST00000329231 Q8N1Y9 231 aa20.94■□□□□ 0.94
ATPAF1-201ENST00000329231 OR2C3Q8N628 320 aa20.94■□□□□ 0.94
ATPAF1-201ENST00000329231 ATP6V0BQ99437 205 aa20.94■□□□□ 0.94
ATPAF1-201ENST00000329231 ZC4H2Q9NQZ6 224 aa20.94■□□□□ 0.94
ATPAF1-201ENST00000329231 TEX13DA0A0J9YY54 714 aaPredicted RBP20.93■□□□□ 0.94
ATPAF1-201ENST00000329231 P0C879 139 aa20.93■□□□□ 0.94
ATPAF1-201ENST00000329231 BAK1Q16611 211 aa20.93■□□□□ 0.94
ATPAF1-201ENST00000329231 IZUMO4Q1ZYL8 232 aa20.93■□□□□ 0.94
ATPAF1-201ENST00000329231 TRIQKQ629K1 86 aa20.93■□□□□ 0.94
ATPAF1-201ENST00000329231 GTSCR1Q86UQ5 136 aa20.93■□□□□ 0.94
ATPAF1-201ENST00000329231 SGPP2Q8IWX5 399 aa20.93■□□□□ 0.94
ATPAF1-201ENST00000329231 RRNAD1Q96FB5 475 aaKnown RBP20.93■□□□□ 0.94
ATPAF1-201ENST00000329231 NAA60Q9H7X0 242 aa20.93■□□□□ 0.94
ATPAF1-201ENST00000329231 PLEKHA3Q9HB20 300 aa20.93■□□□□ 0.94
ATPAF1-201ENST00000329231 C21orf62Q9NYP8 219 aa20.93■□□□□ 0.94
ATPAF1-201ENST00000329231 TECRQ9NZ01 308 aaKnown RBP20.93■□□□□ 0.94
ATPAF1-201ENST00000329231 A8MWP6 167 aa20.92■□□□□ 0.94
ATPAF1-201ENST00000329231 TGOLN2O43493 480 aa20.92■□□□□ 0.94
ATPAF1-201ENST00000329231 FRMD6-AS1P0C7T7 363 aa20.92■□□□□ 0.94
ATPAF1-201ENST00000329231 INPP1P49441 399 aa20.92■□□□□ 0.94
ATPAF1-201ENST00000329231 ERHP84090 104 aaKnown RBP20.92■□□□□ 0.94
ATPAF1-201ENST00000329231 CNPY1Q3B7I2 92 aa20.92■□□□□ 0.94
ATPAF1-201ENST00000329231 CD300EQ496F6 205 aaPredicted RBP20.92■□□□□ 0.94
ATPAF1-201ENST00000329231 RNASE11Q8TAA1 199 aaKnown RBP20.92■□□□□ 0.94
ATPAF1-201ENST00000329231 SCARB1Q8WTV0 552 aa20.92■□□□□ 0.94
ATPAF1-201ENST00000329231 BSCL2Q96G97 398 aaPredicted RBP20.92■□□□□ 0.94
ATPAF1-201ENST00000329231 SDHCQ99643 169 aaPredicted RBP20.92■□□□□ 0.94
ATPAF1-201ENST00000329231 TMEM222Q9H0R3 208 aa20.92■□□□□ 0.94
ATPAF1-201ENST00000329231 PALMDQ9NP74 551 aa20.92■□□□□ 0.94
ATPAF1-201ENST00000329231 A0A0B4J293 547 aa20.91■□□□□ 0.94
ATPAF1-201ENST00000329231 IZUMO1RA6ND01 250 aa20.91■□□□□ 0.94
ATPAF1-201ENST00000329231 CRYM-AS1A6NIL9 109 aa20.91■□□□□ 0.94
ATPAF1-201ENST00000329231 OR5AC1P0C628 307 aa20.91■□□□□ 0.94
ATPAF1-201ENST00000329231 CBLN1P23435 193 aa20.91■□□□□ 0.94
ATPAF1-201ENST00000329231 COL7A1Q02388 2944 aa20.91■□□□□ 0.94
ATPAF1-201ENST00000329231 DEFB114Q30KQ6 69 aa20.91■□□□□ 0.94
ATPAF1-201ENST00000329231 ZNF114Q8NC26 417 aa20.91■□□□□ 0.94
ATPAF1-201ENST00000329231 U3KQK5 164 aa20.91■□□□□ 0.94
ATPAF1-201ENST00000329231 IGHV3-21A0A0B4J1V1 117 aa20.9■□□□□ 0.94
ATPAF1-201ENST00000329231 OR2T8A6NH00 312 aa20.9■□□□□ 0.94
ATPAF1-201ENST00000329231 K7EIM0 57 aa20.9■□□□□ 0.94
ATPAF1-201ENST00000329231 CDS2O95674 445 aa20.9■□□□□ 0.94
ATPAF1-201ENST00000329231 IGHV4-30-4P0DP06 118 aa20.9■□□□□ 0.94
ATPAF1-201ENST00000329231 DHODHQ02127 395 aa20.9■□□□□ 0.94
ATPAF1-201ENST00000329231 SPSB3Q6PJ21 355 aa20.9■□□□□ 0.94
ATPAF1-201ENST00000329231 LINC00299Q6ZSB3 139 aa20.9■□□□□ 0.94
ATPAF1-201ENST00000329231 PDCD10Q9BUL8 212 aa20.9■□□□□ 0.94
ATPAF1-201ENST00000329231 TMEM213A2RRL7 107 aa20.89■□□□□ 0.93
ATPAF1-201ENST00000329231 A8MZ25 164 aa20.89■□□□□ 0.93
ATPAF1-201ENST00000329231 IFNA17P01571 189 aa20.89■□□□□ 0.93
ATPAF1-201ENST00000329231 EDN2P20800 178 aa20.89■□□□□ 0.93
ATPAF1-201ENST00000329231 SBSPONQ8IVN8 264 aa20.89■□□□□ 0.93
ATPAF1-201ENST00000329231 FAM219AQ8IW50 185 aa20.89■□□□□ 0.93
ATPAF1-201ENST00000329231 SLC35G3Q8N808 338 aa20.89■□□□□ 0.93
ATPAF1-201ENST00000329231 GLYATL2Q8WU03 294 aa20.89■□□□□ 0.93
ATPAF1-201ENST00000329231 IGHV3-35A0A0C4DH35 117 aa20.88■□□□□ 0.93
ATPAF1-201ENST00000329231 ST8SIA3O43173 380 aa20.88■□□□□ 0.93
ATPAF1-201ENST00000329231 UNQ9165/PRO28630Q6UXU0 137 aa20.88■□□□□ 0.93
ATPAF1-201ENST00000329231 CACNG8Q8WXS5 425 aa20.88■□□□□ 0.93
ATPAF1-201ENST00000329231 TMEM230Q96A57 120 aa20.88■□□□□ 0.93
ATPAF1-201ENST00000329231 MISP3Q96FF7 219 aa20.88■□□□□ 0.93
ATPAF1-201ENST00000329231 SLC25A21Q9BQT8 299 aaPredicted RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms