RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 MRGPRFQ96AM1 343 aa9.17□□□□□ -0.94
TPM3-204ENST00000323144 SPAG8Q99932 426 aaPredicted RBP9.17□□□□□ -0.94
TPM3-204ENST00000323144 TMEM14BQ9NUH8 114 aa9.17□□□□□ -0.94
TPM3-204ENST00000323144 THYN1Q9P016 225 aa9.17□□□□□ -0.94
TPM3-204ENST00000323144 COMMD3Q9UBI1 195 aa9.17□□□□□ -0.94
TPM3-204ENST00000323144 IGHV3-49A0A0A0MS15 119 aa9.16□□□□□ -0.94
TPM3-204ENST00000323144 A0A0J9YWU9 116 aa9.16□□□□□ -0.94
TPM3-204ENST00000323144 M0QYG6 137 aa9.16□□□□□ -0.94
TPM3-204ENST00000323144 NDUFA4O00483 81 aa9.16□□□□□ -0.94
TPM3-204ENST00000323144 TSPAN4O14817 238 aa9.16□□□□□ -0.94
TPM3-204ENST00000323144 HPGDSO60760 199 aa9.16□□□□□ -0.94
TPM3-204ENST00000323144 VBP1P61758 197 aa9.16□□□□□ -0.94
TPM3-204ENST00000323144 ZNF124Q15973 351 aa9.16□□□□□ -0.94
TPM3-204ENST00000323144 HSD17B13Q7Z5P4 300 aaPredicted RBP9.16□□□□□ -0.94
TPM3-204ENST00000323144 CMTM1Q8IZ96 169 aa9.16□□□□□ -0.94
TPM3-204ENST00000323144 OR2C3Q8N628 320 aa9.16□□□□□ -0.94
TPM3-204ENST00000323144 TSPAN14Q8NG11 270 aa9.16□□□□□ -0.94
TPM3-204ENST00000323144 IL17DQ8TAD2 202 aa9.16□□□□□ -0.94
TPM3-204ENST00000323144 SEC22AQ96IW7 307 aa9.16□□□□□ -0.94
TPM3-204ENST00000323144 C5orf66Q9H5L9 145 aa9.16□□□□□ -0.94
TPM3-204ENST00000323144 PRNDQ9UKY0 176 aa9.16□□□□□ -0.94
TPM3-204ENST00000323144 CYB5BO43169 146 aa9.15□□□□□ -0.94
TPM3-204ENST00000323144 SNAPC5O75971 98 aa9.15□□□□□ -0.94
TPM3-204ENST00000323144 TNFAIP8O95379 198 aa9.15□□□□□ -0.94
TPM3-204ENST00000323144 CTSDP07339 412 aaPredicted RBP9.15□□□□□ -0.94
TPM3-204ENST00000323144 RPL35AP18077 110 aaKnown RBP9.15□□□□□ -0.94
TPM3-204ENST00000323144 ELK1P19419 428 aa9.15□□□□□ -0.94
TPM3-204ENST00000323144 FCGR2BP31994 310 aaPredicted RBP9.15□□□□□ -0.94
TPM3-204ENST00000323144 RCVRNP35243 200 aa9.15□□□□□ -0.94
TPM3-204ENST00000323144 ANKRD55Q3KP44 614 aa9.15□□□□□ -0.94
TPM3-204ENST00000323144 OR6F1Q8NGZ6 308 aa9.15□□□□□ -0.94
TPM3-204ENST00000323144 OR5B3Q8NH48 314 aa9.15□□□□□ -0.94
TPM3-204ENST00000323144 LINC00476Q8WZB0 136 aa9.15□□□□□ -0.94
TPM3-204ENST00000323144 MISP3Q96FF7 219 aa9.15□□□□□ -0.94
TPM3-204ENST00000323144 FUNDC2Q9BWH2 189 aa9.15□□□□□ -0.94
TPM3-204ENST00000323144 VCX3AQ9NNX9 186 aa9.15□□□□□ -0.94
TPM3-204ENST00000323144 A0A087WXM4 84 aa9.14□□□□□ -0.95
TPM3-204ENST00000323144 I3L2K1 104 aa9.14□□□□□ -0.95
TPM3-204ENST00000323144 APOA1P02647 267 aa9.14□□□□□ -0.95
TPM3-204ENST00000323144 PI3P19957 117 aa9.14□□□□□ -0.95
TPM3-204ENST00000323144 PPP5CP53041 499 aa9.14□□□□□ -0.95
TPM3-204ENST00000323144 PRCDQ00LT1 54 aa9.14□□□□□ -0.95
TPM3-204ENST00000323144 SPSB3Q6PJ21 355 aa9.14□□□□□ -0.95
TPM3-204ENST00000323144 LYG2Q86SG7 212 aa9.14□□□□□ -0.95
TPM3-204ENST00000323144 OR1P1Q8NH06 330 aa9.14□□□□□ -0.95
TPM3-204ENST00000323144 RNF2Q99496 336 aa9.14□□□□□ -0.95
TPM3-204ENST00000323144 NAA50Q9GZZ1 169 aaKnown RBP9.14□□□□□ -0.95
TPM3-204ENST00000323144 IGKV3-7A0A075B6H7 116 aa9.13□□□□□ -0.95
TPM3-204ENST00000323144 IGHV3OR16-13A0A075B7E8 117 aa9.13□□□□□ -0.95
TPM3-204ENST00000323144 IGHV3-74A0A0B4J1X5 117 aa9.13□□□□□ -0.95
TPM3-204ENST00000323144 CXorf65A6NEN9 183 aa9.13□□□□□ -0.95
TPM3-204ENST00000323144 MT-CO2P00403 227 aa9.13□□□□□ -0.95
TPM3-204ENST00000323144 IGKV1-5P01602 117 aa9.13□□□□□ -0.95
TPM3-204ENST00000323144 CTSGP08311 255 aa9.13□□□□□ -0.95
TPM3-204ENST00000323144 SMIM18P0DKX4 95 aa9.13□□□□□ -0.95
TPM3-204ENST00000323144 TFPI2P48307 235 aa9.13□□□□□ -0.95
TPM3-204ENST00000323144 APOC4P55056 127 aa9.13□□□□□ -0.95
TPM3-204ENST00000323144 TSPAN5P62079 268 aa9.13□□□□□ -0.95
TPM3-204ENST00000323144 APRG1Q8IVJ8 170 aa9.13□□□□□ -0.95
TPM3-204ENST00000323144 SLC38A6Q8IZM9 456 aa9.13□□□□□ -0.95
TPM3-204ENST00000323144 ZNF114Q8NC26 417 aa9.13□□□□□ -0.95
TPM3-204ENST00000323144 PINX1Q96BK5 328 aaKnown RBP9.13□□□□□ -0.95
TPM3-204ENST00000323144 TMEM56Q96MV1 263 aa9.13□□□□□ -0.95
TPM3-204ENST00000323144 TSC22D3Q99576 134 aa9.13□□□□□ -0.95
TPM3-204ENST00000323144 SCPEP1Q9HB40 452 aa9.13□□□□□ -0.95
TPM3-204ENST00000323144 IGHV7-4-1A0A0J9YVY3 117 aa9.12□□□□□ -0.95
TPM3-204ENST00000323144 OR4C46A6NHA9 309 aa9.12□□□□□ -0.95
TPM3-204ENST00000323144 C15orf62A8K5M9 175 aa9.12□□□□□ -0.95
TPM3-204ENST00000323144 CHEK1O14757 476 aa9.12□□□□□ -0.95
TPM3-204ENST00000323144 NUPL2O15504 423 aaKnown RBP9.12□□□□□ -0.95
TPM3-204ENST00000323144 SPRY2O43597 315 aa9.12□□□□□ -0.95
TPM3-204ENST00000323144 H2BFWTQ7Z2G1 175 aa9.12□□□□□ -0.95
TPM3-204ENST00000323144 CADM3Q8N126 398 aa9.12□□□□□ -0.95
TPM3-204ENST00000323144 OR4D10Q8NGI6 311 aa9.12□□□□□ -0.95
TPM3-204ENST00000323144 TP53RKQ96S44 253 aa9.12□□□□□ -0.95
TPM3-204ENST00000323144 ATP6V0BQ99437 205 aa9.12□□□□□ -0.95
TPM3-204ENST00000323144 MAP6D1Q9H9H5 199 aa9.12□□□□□ -0.95
TPM3-204ENST00000323144 SMPXQ9UHP9 88 aa9.12□□□□□ -0.95
TPM3-204ENST00000323144 A0A0G2JRQ6 117 aa9.11□□□□□ -0.95
TPM3-204ENST00000323144 YIF1AO95070 293 aa9.11□□□□□ -0.95
TPM3-204ENST00000323144 P0C879 139 aa9.11□□□□□ -0.95
TPM3-204ENST00000323144 PGAM2P15259 253 aa9.11□□□□□ -0.95
TPM3-204ENST00000323144 TNFRSF9Q07011 255 aa9.11□□□□□ -0.95
TPM3-204ENST00000323144 Q6ZWC4 215 aa9.11□□□□□ -0.95
TPM3-204ENST00000323144 LHFPL1Q86WI0 220 aa9.11□□□□□ -0.95
TPM3-204ENST00000323144 WFDC3Q8IUB2 231 aa9.11□□□□□ -0.95
TPM3-204ENST00000323144 OR52I2Q8NH67 350 aa9.11□□□□□ -0.95
TPM3-204ENST00000323144 OR4A16Q8NH70 328 aa9.11□□□□□ -0.95
TPM3-204ENST00000323144 OR10C1Q96KK4 312 aa9.11□□□□□ -0.95
TPM3-204ENST00000323144 RHPN1-AS1Q9BWJ2 59 aa9.11□□□□□ -0.95
TPM3-204ENST00000323144 NXF2Q9GZY0 626 aaKnown RBP9.11□□□□□ -0.95
TPM3-204ENST00000323144 ZFAND3Q9H8U3 227 aa9.11□□□□□ -0.95
TPM3-204ENST00000323144 FAM212BQ9NTI7 297 aaPredicted RBP9.11□□□□□ -0.95
TPM3-204ENST00000323144 KLK11Q9UBX7 282 aa9.11□□□□□ -0.95
TPM3-204ENST00000323144 TP53TG1Q9Y2A0 90 aa9.11□□□□□ -0.95
TPM3-204ENST00000323144 IGHV3-66A0A0C4DH42 116 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 FAM25AB3EWG3 89 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 FAM25CB3EWG5 89 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 FAM25GB3EWG6 89 aa9.1□□□□□ -0.95
TPM3-204ENST00000323144 K7EMT4 169 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms