RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 PDZD11Q5EBL8 140 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 UNQ5815/PRO19632Q6UWF5 114 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 Q6ZSR3 168 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 STPG2Q8N412 459 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 ZNF525Q8N782 197 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 ZNF331Q9NQX6 463 aaPredicted RBP7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 PITPNC1Q9UKF7 332 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 SETD2Q9BYW2 2564 aaPredicted RBP7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 H3BQ15 152 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 MPDU1O75352 247 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 HSPB1P04792 205 aaKnown RBP7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 IGHV1-8P0DP01 117 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 SUMO1P63165 101 aaKnown RBP7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 AARDQ4LEZ3 155 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 SLC16A13Q7RTY0 426 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 OR5R1Q8NH85 324 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 TMPRSS5Q9H3S3 457 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 RNF24Q9Y225 148 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 MOSP00540 346 aa7.65□□□□□ -1.18
TMEM39A-201ENST00000319172 FAM157CP0CG43 387 aa7.65□□□□□ -1.18
TMEM39A-201ENST00000319172 GATA2P23769 480 aaPredicted RBP7.65□□□□□ -1.18
TMEM39A-201ENST00000319172 GATA4P43694 442 aa7.65□□□□□ -1.18
TMEM39A-201ENST00000319172 PUSL1Q8N0Z8 303 aaKnown RBP7.65□□□□□ -1.18
TMEM39A-201ENST00000319172 RCC1LQ96I51 464 aaKnown RBP7.65□□□□□ -1.18
TMEM39A-201ENST00000319172 MS4A10Q96PG2 267 aa7.65□□□□□ -1.18
TMEM39A-201ENST00000319172 DMRTA2Q96SC8 542 aa7.65□□□□□ -1.18
TMEM39A-201ENST00000319172 EPG5Q9HCE0 2579 aa7.65□□□□□ -1.18
TMEM39A-201ENST00000319172 RANP62826 216 aaKnown RBP7.65□□□□□ -1.18
TMEM39A-201ENST00000319172 ZNF585BQ52M93 769 aa7.65□□□□□ -1.18
TMEM39A-201ENST00000319172 C7orf69Q9H7B7 122 aa7.65□□□□□ -1.18
TMEM39A-201ENST00000319172 MANBALQ9NQG1 85 aa7.65□□□□□ -1.18
TMEM39A-201ENST00000319172 UPK2O00526 184 aa7.65□□□□□ -1.19
TMEM39A-201ENST00000319172 CXorf1O96002 111 aa7.65□□□□□ -1.19
TMEM39A-201ENST00000319172 PAX6P26367 422 aa7.65□□□□□ -1.19
TMEM39A-201ENST00000319172 EFNA4P52798 201 aa7.65□□□□□ -1.19
TMEM39A-201ENST00000319172 DLK1P80370 383 aa7.65□□□□□ -1.19
TMEM39A-201ENST00000319172 BSXQ3C1V8 233 aa7.65□□□□□ -1.19
TMEM39A-201ENST00000319172 C3orf36Q3SXR2 165 aa7.65□□□□□ -1.19
TMEM39A-201ENST00000319172 FAM209BQ5JX69 171 aa7.65□□□□□ -1.19
TMEM39A-201ENST00000319172 C22orf34Q6ZV56 151 aa7.65□□□□□ -1.19
TMEM39A-201ENST00000319172 ZNF383Q8NA42 475 aa7.65□□□□□ -1.19
TMEM39A-201ENST00000319172 Q8NFD4 153 aa7.65□□□□□ -1.19
TMEM39A-201ENST00000319172 OR2T10Q8NGZ9 312 aa7.65□□□□□ -1.19
TMEM39A-201ENST00000319172 DYNLRB2Q8TF09 96 aa7.65□□□□□ -1.19
TMEM39A-201ENST00000319172 PFDN5Q99471 154 aa7.65□□□□□ -1.19
TMEM39A-201ENST00000319172 TMEM167BQ9NRX6 74 aa7.65□□□□□ -1.19
TMEM39A-201ENST00000319172 IGHV2-26A0A0B4J1V2 119 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 H3BTX0 84 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 TIMM23O14925 209 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 RBFOX2O43251 390 aaKnown RBP eCLIP7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 MMP23AO75900 390 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 LRRC75BQ2VPJ9 315 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 KHDC3LQ587J8 217 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 ZNF439Q8NDP4 499 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 OR10W1Q8NGF6 305 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 Q8WTZ3 238 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 P2RX4Q99571 388 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 NPCDR1Q9BY65 106 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 IFI27L2Q9H2X8 130 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 C15orf61A6NNL5 157 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 CLDN34H7C241 214 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 IGFBP2P18065 325 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 GNG4P50150 75 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 SSX7Q7RTT5 188 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 EAF1Q96JC9 268 aaPredicted RBP7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 TOLLIPQ9H0E2 274 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 SERTM2A0A1B0GWG4 89 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 NPIPB11E5RHQ5 1161 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 RRHO14718 337 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 NDUFS7O75251 213 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 HYPMO75409 117 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 PRB1P04280 392 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 BAGE3Q86Y29 109 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 BAGE2Q86Y30 109 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 STPG3Q8N7X2 389 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 OR5AU1Q8NGC0 362 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 BPESC1Q9GZL8 116 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 ZNF430Q9H8G1 570 aaPredicted RBP7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 CYTL1Q9NRR1 136 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 HSPB7Q9UBY9 170 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 NAGKQ9UJ70 344 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 SHISA9B4DS77 424 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 IGKV1-16P04430 117 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 LOXL3P58215 753 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 MEF2BQ02080 365 aaPredicted RBP7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 HLA-DRB5Q30154 266 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 TEX29Q8N6K0 151 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 CTDSP1Q9GZU7 261 aa7.64□□□□□ -1.19
TMEM39A-201ENST00000319172 USP9YO00507 2555 aaPredicted RBP7.63□□□□□ -1.19
TMEM39A-201ENST00000319172 CHEK1O14757 476 aa7.63□□□□□ -1.19
TMEM39A-201ENST00000319172 TFPI2P48307 235 aa7.63□□□□□ -1.19
TMEM39A-201ENST00000319172 DPPA3Q6W0C5 159 aa7.63□□□□□ -1.19
TMEM39A-201ENST00000319172 NABP2Q9BQ15 211 aa7.63□□□□□ -1.19
TMEM39A-201ENST00000319172 YAE1D1Q9NRH1 226 aa7.63□□□□□ -1.19
TMEM39A-201ENST00000319172 NDUFB4O95168 129 aa7.63□□□□□ -1.19
TMEM39A-201ENST00000319172 ARL14EPLP0DKL9 152 aa7.63□□□□□ -1.19
TMEM39A-201ENST00000319172 CFHR2P36980 270 aa7.63□□□□□ -1.19
TMEM39A-201ENST00000319172 SLC35B1P78383 322 aa7.63□□□□□ -1.19
TMEM39A-201ENST00000319172 AP1S3Q96PC3 154 aa7.63□□□□□ -1.19
TMEM39A-201ENST00000319172 LRRK2Q5S007 2527 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms