RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 EPOPA6NHQ4 379 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 F2RL2O00254 374 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 ACTL6BO94805 426 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 NBEAP1P0C6P0 100 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 OTX2P32243 289 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 SRYQ05066 204 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 FXYD3Q14802 87 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 SPINK9Q5DT21 86 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 LCN12Q6JVE5 192 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 C5orf17Q8NAS9 161 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 OR1L8Q8NGR8 309 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 NUDT11Q96G61 164 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 C5orf30Q96GV9 206 aa3.94□□□□□ -1.78
PTPN13-201ENST00000316707 GGTLC3B5MD39 225 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 SP1P08047 785 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 IGFBP2P18065 325 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 RNFT1Q5M7Z0 435 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 BVES-AS1Q5T3Y7 98 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 SPATA31B1PQ5VZV4 182 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 OR5A1Q8NGJ0 315 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 OR2T6Q8NHC8 308 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 IGF2BP2-AS1Q96M15 143 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 CLCF1Q9UBD9 225 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 OR51B2Q9Y5P1 312 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.93□□□□□ -1.78
PTPN13-201ENST00000316707 PEX7O00628 323 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 GPR183P32249 361 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 ZNF355PQ9NSJ1 428 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 RNF114Q9Y508 228 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 EML5Q05BV3 1969 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 GAGE12BA1L429 117 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 C22orf46C9J442 243 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 CHEK1O14757 476 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 TAX1BP3O14907 124 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 CER1O95813 267 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 IGLV2-8P01709 118 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 MYF5P13349 255 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 ERHP84090 104 aaKnown RBP3.93□□□□□ -1.78
PTPN13-201ENST00000316707 SLAQ13239 276 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 OR10AG1Q8NH19 301 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 OSR1Q8TAX0 266 aaPredicted RBP3.93□□□□□ -1.78
PTPN13-201ENST00000316707 TMEM14BQ9NUH8 114 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 RNF24Q9Y225 148 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 PPIAL4AQ9Y536 164 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 AHCTF1Q8WYP5 2266 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 APOBEC3AP31941 199 aaPredicted RBP3.93□□□□□ -1.78
PTPN13-201ENST00000316707 PRDX2P32119 198 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 CAMPP49913 170 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 SLC35B1P78383 322 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 WDR86Q86TI4 376 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 OR2Z1Q8NG97 314 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 PAXXQ9BUH6 204 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 TICRRQ7Z2Z1 1910 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 A0A1B0GXF2 115 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 C15orf65H3BRN8 121 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 DLL1O00548 723 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 SSTR5P35346 364 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 CEACAM3P40198 252 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 RPL8P62917 257 aaKnown RBP3.93□□□□□ -1.78
PTPN13-201ENST00000316707 ZXDAP98168 799 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 Q6AWC8 147 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 ATOH7Q8N100 152 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 ZNF430Q9H8G1 570 aaPredicted RBP3.93□□□□□ -1.78
PTPN13-201ENST00000316707 AP5S1Q9NUS5 200 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 CPAMD8Q8IZJ3 1885 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 C21orf140B9A014 251 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 UPK2O00526 184 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 PROP1O75360 226 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 P01737 135 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 CR1LQ2VPA4 569 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 TMEM97Q5BJF2 176 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 RBPMS2Q6ZRY4 209 aaKnown RBP3.93□□□□□ -1.78
PTPN13-201ENST00000316707 OR4X2Q8NGF9 303 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 LRRC29Q8WV35 223 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 SPOCK3Q9BQ16 436 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 IDI2-AS1Q9NZ38 188 aa3.93□□□□□ -1.78
PTPN13-201ENST00000316707 SRRM5B3KS81 715 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 TMEM238C9JI98 176 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 NDUFS8O00217 210 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 CORTO00230 105 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 COX7A2P2O60397 106 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 APOA2P02652 100 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 FOXG1P55316 489 aaPredicted RBP3.92□□□□□ -1.78
PTPN13-201ENST00000316707 PSG9Q00887 426 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 SLC25A48Q6ZT89 311 aaKnown RBP3.92□□□□□ -1.78
PTPN13-201ENST00000316707 OR1N2Q8NGR9 330 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 CSTL1Q9H114 145 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 RPP21Q9H633 154 aaKnown RBP3.92□□□□□ -1.78
PTPN13-201ENST00000316707 LOXL2Q9Y4K0 774 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 IGHV3-43A0A0B4J1X8 118 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 TEX50A0A1B0GTY4 177 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 C7orf71A4D174 169 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 IGHV3-43DP0DP04 118 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 C10orf113Q5VZT2 155 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 NUP35Q8NFH5 326 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 KLF14Q8TD94 323 aaPredicted RBP3.92□□□□□ -1.78
PTPN13-201ENST00000316707 DDB2Q92466 427 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 NDFIP1Q9BT67 221 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 A0A0G2JMM0 328 aa3.92□□□□□ -1.78
PTPN13-201ENST00000316707 A0A1W2PPB8 328 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms