RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 ZNF25P17030 456 aaPredicted RBP6.23□□□□□ -1.41
TRIM55-202ENST00000315962 CYP2G1PQ6ZSU1 146 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 OR2T10Q8NGZ9 312 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 NDUFAF3Q9BU61 184 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 PAM16Q9Y3D7 125 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 IGHV1-69-2A0A0G2JMI3 117 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 KBTBD11-OT1A0A1B0GTJ5 212 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 A0A1W2PPR1 153 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 A0A1W2PRD5 423 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 A0A1W2PRF3 423 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 A0A1W2PRM7 423 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 TMEM178BH3BS89 294 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 HRASP01112 189 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 IFNA1P01562 189 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 APELAP0DMC3 54 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 CBLN1P23435 193 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 TFPI2P48307 235 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 TMEM200BQ69YZ2 307 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 ZNF788Q6ZQV5 615 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 H2BFWTQ7Z2G1 175 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 PPP1R35Q8TAP8 253 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 MBD3L1Q8WWY6 194 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 FAM103A1Q9BTL3 118 aaKnown RBP6.23□□□□□ -1.41
TRIM55-202ENST00000315962 QTRT1Q9BXR0 403 aaKnown RBP6.23□□□□□ -1.41
TRIM55-202ENST00000315962 IFI27L2Q9H2X8 130 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 NGBQ9NPG2 151 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 POLR3KQ9Y2Y1 108 aaPredicted RBP6.23□□□□□ -1.41
TRIM55-202ENST00000315962 ZANQ9Y493 2812 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 NPIPB11E5RHQ5 1161 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 RBFOX2O43251 390 aaKnown RBP eCLIP6.22□□□□□ -1.41
TRIM55-202ENST00000315962 OR9G9P0C7N8 305 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 APOBEC3AP31941 199 aaPredicted RBP6.22□□□□□ -1.41
TRIM55-202ENST00000315962 DUTP33316 252 aaKnown RBP6.22□□□□□ -1.41
TRIM55-202ENST00000315962 CFHR2P36980 270 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 CDKN1AP38936 164 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 GATA4P43694 442 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 TNFRSF9Q07011 255 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 TOMM20LQ6UXN7 152 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 C1orf174Q8IYL3 243 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 ST6GALNAC3Q8NDV1 305 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 OR5R1Q8NH85 324 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 Q8TCH9 128 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 SSMEM1Q8WWF3 244 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 TRAPPC1Q9Y5R8 145 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 TRBV20OR9-2A0A075B6H5 130 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 TRAV1-1A0A0B4J248 108 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 GNB1P62873 340 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 FAM122AQ96E09 287 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 TBX15Q96SF7 602 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 FKBP11Q9NYL4 201 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 OR6C3Q9NZP0 311 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 NAV3Q8IVL0 2385 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 C19orf84I3L1E1 186 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 SLC25A6P12236 298 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 ADMP35318 185 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 CNN1P51911 297 aaKnown RBP6.22□□□□□ -1.41
TRIM55-202ENST00000315962 NUTF2P61970 127 aaKnown RBP6.22□□□□□ -1.41
TRIM55-202ENST00000315962 CATR1Q13166 79 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 KIAA1644Q3SXP7 199 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 SGMS2Q8NHU3 365 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 DTD1Q8TEA8 209 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 TMEM18Q96B42 140 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 R3HDM4Q96D70 268 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 NPCDR1Q9BY65 106 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 MS4A5Q9H3V2 200 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 MANBALQ9NQG1 85 aa6.22□□□□□ -1.41
TRIM55-202ENST00000315962 CHTOPQ9Y3Y2 248 aaKnown RBP6.22□□□□□ -1.41
TRIM55-202ENST00000315962 SCO2A0A1W2PP80 73 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 ADH4P08319 380 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 NPSP0C0P6 89 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 MRPS11P82912 194 aaKnown RBP6.21□□□□□ -1.42
TRIM55-202ENST00000315962 CLEC2AQ6UVW9 174 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 ABHD12Q8N2K0 398 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 TMEM170AQ8WVE7 144 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 MS4A10Q96PG2 267 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 S1PR3Q99500 378 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 C2orf88Q9BSF0 95 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 RNF114Q9Y508 228 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 CHD6Q8TD26 2715 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 VSTM5A8MXK1 200 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 IGHV3-48P01763 117 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 CDC34P49427 236 aaPredicted RBP6.21□□□□□ -1.42
TRIM55-202ENST00000315962 TCL1AP56279 114 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 HTD2P86397 168 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 OR5I1Q13606 314 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 HLA-DRB5Q30154 266 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 ACTL10Q5JWF8 245 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 SPATA31B1PQ5VZV4 182 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 DPPA3Q6W0C5 159 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 LINC01551Q86U37 167 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 ZNF709Q8N972 641 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 OR10P1Q8NGE3 313 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 VN1R17PQ8TDU5 208 aa6.21□□□□□ -1.42
TRIM55-202ENST00000315962 NEIL1Q96FI4 390 aaPredicted RBP6.21□□□□□ -1.42
TRIM55-202ENST00000315962 PSMG3Q9BT73 122 aaPredicted RBP6.21□□□□□ -1.42
TRIM55-202ENST00000315962 PTPN13Q12923 2485 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 RAI1Q7Z5J4 1906 aaPredicted RBP6.2□□□□□ -1.42
TRIM55-202ENST00000315962 TRAV34A0A0B4J273 112 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 CTXND1A0A1B0GTU2 59 aa6.2□□□□□ -1.42
TRIM55-202ENST00000315962 DUXBA0A1W2PPF3 345 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms