RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 FAM216AQ8WUB2 273 aa5.6□□□□□ -1.51
LYSMD3-201ENST00000315948 ISOC2Q96AB3 205 aa5.6□□□□□ -1.51
LYSMD3-201ENST00000315948 TMEM147Q9BVK8 224 aa5.6□□□□□ -1.51
LYSMD3-201ENST00000315948 NDUFA4L2Q9NRX3 87 aa5.6□□□□□ -1.51
LYSMD3-201ENST00000315948 AURKAIP1Q9NWT8 199 aaPredicted RBP5.6□□□□□ -1.51
LYSMD3-201ENST00000315948 DOK5Q9P104 306 aa5.6□□□□□ -1.51
LYSMD3-201ENST00000315948 METTL1Q9UBP6 276 aaKnown RBP5.6□□□□□ -1.51
LYSMD3-201ENST00000315948 RNASE2P10153 161 aaKnown RBP5.6□□□□□ -1.51
LYSMD3-201ENST00000315948 PRCDQ00LT1 54 aa5.6□□□□□ -1.51
LYSMD3-201ENST00000315948 ZNF90Q03938 601 aa5.6□□□□□ -1.51
LYSMD3-201ENST00000315948 PSG5Q15238 335 aa5.6□□□□□ -1.51
LYSMD3-201ENST00000315948 MMDQ15546 238 aa5.6□□□□□ -1.51
LYSMD3-201ENST00000315948 TCTEX1D1Q8N7M0 179 aa5.6□□□□□ -1.51
LYSMD3-201ENST00000315948 ZNF596Q8TC21 504 aa5.6□□□□□ -1.51
LYSMD3-201ENST00000315948 TBX15Q96SF7 602 aa5.6□□□□□ -1.51
LYSMD3-201ENST00000315948 RAB19A4D1S5 217 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 KRBOX1C9JBD0 128 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 NDPQ00604 133 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 ICAM4Q14773 271 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 SP5Q6BEB4 398 aaPredicted RBP5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 LINC00311Q8N616 119 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 OR51G1Q8NGK1 321 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 OR10G4Q8NGN3 311 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 OR10G9Q8NGN4 311 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 OR10G7Q8NGN6 311 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 RAB24Q969Q5 203 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 AJUBAQ96IF1 538 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 UHRF2Q96PU4 802 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 LINC01548A6NM66 108 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 VENTXO95231 258 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 MDKP21741 143 aaPredicted RBP5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 KIR2DS2P43631 304 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 GAMTQ14353 236 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 ZNF787Q6DD87 383 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 TMEM219Q86XT9 240 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 C8orf46Q8TAG6 207 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 GNPNAT1Q96EK6 184 aaPredicted RBP5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 ADTRPQ96IZ2 230 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 P2RX4Q99571 388 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 GGTLC1Q9BX51 225 aa5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 PUS1Q9Y606 427 aaKnown RBP eCLIP5.59□□□□□ -1.51
LYSMD3-201ENST00000315948 MAP1LC3B2A6NCE7 125 aa5.59□□□□□ -1.52
LYSMD3-201ENST00000315948 MOSP00540 346 aa5.59□□□□□ -1.52
LYSMD3-201ENST00000315948 AVPP01185 164 aa5.59□□□□□ -1.52
LYSMD3-201ENST00000315948 SNRNP70P08621 437 aaKnown RBP5.59□□□□□ -1.52
LYSMD3-201ENST00000315948 ZNF137PP52743 207 aa5.59□□□□□ -1.52
LYSMD3-201ENST00000315948 DVL1P1P54792 670 aaPredicted RBP5.59□□□□□ -1.52
LYSMD3-201ENST00000315948 PLGLAQ15195 96 aa5.59□□□□□ -1.52
LYSMD3-201ENST00000315948 POU2AF1Q16633 256 aa5.59□□□□□ -1.52
LYSMD3-201ENST00000315948 TPTE2P1Q5T6R2 138 aa5.59□□□□□ -1.52
LYSMD3-201ENST00000315948 IL34Q6ZMJ4 242 aa5.59□□□□□ -1.52
LYSMD3-201ENST00000315948 OSR1Q8TAX0 266 aaPredicted RBP5.59□□□□□ -1.52
LYSMD3-201ENST00000315948 ABHD5Q8WTS1 349 aa5.59□□□□□ -1.52
LYSMD3-201ENST00000315948 MAP1LC3BQ9GZQ8 125 aa5.59□□□□□ -1.52
LYSMD3-201ENST00000315948 RAB9BQ9NP90 201 aa5.59□□□□□ -1.52
LYSMD3-201ENST00000315948 BET1LQ9NYM9 111 aa5.59□□□□□ -1.52
LYSMD3-201ENST00000315948 SIGLEC9Q9Y336 463 aa5.59□□□□□ -1.52
LYSMD3-201ENST00000315948 RBFOX3A6NFN3 312 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 DNASE2O00115 360 aaPredicted RBP5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 HTR1DP28221 377 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 CFHR4Q92496 578 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 CIB3Q96Q77 187 aaPredicted RBP5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 ENY2Q9NPA8 101 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 LINC00527Q9UJ94 153 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 WDR83OSQ9Y284 106 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 IGLC7A0M8Q6 106 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 NCBP2LA6PVI3 153 aaKnown RBP5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 ZNF727A8MUV8 499 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 TOX4O94842 621 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 IGHV3-23P01764 117 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 PRRX1P54821 245 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 PDPNQ86YL7 162 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 MISP3Q96FF7 219 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 NKX6-2Q9C056 277 aaPredicted RBP5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 SIRPDQ9H106 197 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 PRNDQ9UKY0 176 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 PXMP4Q9Y6I8 212 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 IGHV3OR16-8A0A075B7F1 116 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 TRAV5A0A0B4J249 113 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 IGHV4-38-2P0DP08 117 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 PRTN3P24158 256 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 SAA4P35542 130 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 PRSS8Q16651 343 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 VWC2Q2TAL6 325 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 TMEM41BQ5BJD5 291 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 STPG3Q8N7X2 389 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 OR52E5Q8NH55 327 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 DERL1Q9BUN8 251 aa5.58□□□□□ -1.52
LYSMD3-201ENST00000315948 PGPEP1LA6NFU8 196 aa5.57□□□□□ -1.52
LYSMD3-201ENST00000315948 UMAD1C9J7I0 102 aa5.57□□□□□ -1.52
LYSMD3-201ENST00000315948 OPRK1P41145 380 aa5.57□□□□□ -1.52
LYSMD3-201ENST00000315948 PPP1R27Q86WC6 154 aa5.57□□□□□ -1.52
LYSMD3-201ENST00000315948 BCL6BQ8N143 479 aaPredicted RBP5.57□□□□□ -1.52
LYSMD3-201ENST00000315948 TMEM167AQ8TBQ9 72 aa5.57□□□□□ -1.52
LYSMD3-201ENST00000315948 FAM168AQ92567 244 aa5.57□□□□□ -1.52
LYSMD3-201ENST00000315948 NPIPB3Q92617 1050 aa5.57□□□□□ -1.52
LYSMD3-201ENST00000315948 EAF1Q96JC9 268 aaPredicted RBP5.57□□□□□ -1.52
LYSMD3-201ENST00000315948 DPM3Q9P2X0 92 aa5.57□□□□□ -1.52
LYSMD3-201ENST00000315948 LSM4Q9Y4Z0 139 aaKnown RBP5.57□□□□□ -1.52
LYSMD3-201ENST00000315948 ODF3BA8MYP8 253 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms