RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 TECRQ9NZ01 308 aaKnown RBP12.18□□□□□ -0.46
CHFR-202ENST00000315585 XKRY2A2RUG3 117 aa12.18□□□□□ -0.46
CHFR-202ENST00000315585 C9JCJ5 164 aa12.18□□□□□ -0.46
CHFR-202ENST00000315585 INS-IGF2F8WCM5 200 aa12.18□□□□□ -0.46
CHFR-202ENST00000315585 DVL1O14640 695 aa12.18□□□□□ -0.46
CHFR-202ENST00000315585 USF1P22415 310 aaPredicted RBP12.18□□□□□ -0.46
CHFR-202ENST00000315585 PDLIM4P50479 330 aa12.18□□□□□ -0.46
CHFR-202ENST00000315585 OR5T1Q8NG75 326 aa12.18□□□□□ -0.46
CHFR-202ENST00000315585 C11orf52Q96A22 123 aa12.18□□□□□ -0.46
CHFR-202ENST00000315585 TANC2Q9HCD6 1990 aa12.18□□□□□ -0.46
CHFR-202ENST00000315585 DSCAMO60469 2012 aa12.17□□□□□ -0.46
CHFR-202ENST00000315585 FAM90A27PA6NNH2 459 aa12.17□□□□□ -0.46
CHFR-202ENST00000315585 NDUFB3O43676 98 aa12.17□□□□□ -0.46
CHFR-202ENST00000315585 GPX4P36969 197 aaPredicted RBP12.17□□□□□ -0.46
CHFR-202ENST00000315585 SUB1P53999 127 aaKnown RBP eCLIP12.17□□□□□ -0.46
CHFR-202ENST00000315585 PDZD11Q5EBL8 140 aa12.17□□□□□ -0.46
CHFR-202ENST00000315585 FAM78BQ5VT40 261 aa12.17□□□□□ -0.46
CHFR-202ENST00000315585 FLYWCH2Q96CP2 140 aaKnown RBP12.17□□□□□ -0.46
CHFR-202ENST00000315585 HIST1H2BLQ99880 126 aa12.17□□□□□ -0.46
CHFR-202ENST00000315585 FUT9Q9Y231 359 aa12.17□□□□□ -0.46
CHFR-202ENST00000315585 CFAP47Q6ZTR5 3102 aa12.17□□□□□ -0.46
CHFR-202ENST00000315585 MGAQ8IWI9 3026 aa12.17□□□□□ -0.46
CHFR-202ENST00000315585 DSCAML1Q8TD84 2053 aa12.17□□□□□ -0.46
CHFR-202ENST00000315585 TEX50A0A1B0GTY4 177 aa12.17□□□□□ -0.46
CHFR-202ENST00000315585 GFI1BQ5VTD9 330 aa12.17□□□□□ -0.46
CHFR-202ENST00000315585 MRPL41Q8IXM3 137 aaKnown RBP12.17□□□□□ -0.46
CHFR-202ENST00000315585 OR10G8Q8NGN5 311 aa12.17□□□□□ -0.46
CHFR-202ENST00000315585 OR4C13Q8NGP0 309 aa12.17□□□□□ -0.46
CHFR-202ENST00000315585 OR5R1Q8NH85 324 aa12.17□□□□□ -0.46
CHFR-202ENST00000315585 SEPSECSQ9HD40 501 aaKnown RBP12.17□□□□□ -0.46
CHFR-202ENST00000315585 CEP295Q9C0D2 2601 aa12.17□□□□□ -0.46
CHFR-202ENST00000315585 CADP27708 2225 aa12.17□□□□□ -0.46
CHFR-202ENST00000315585 SHISA9B4DS77 424 aa12.16□□□□□ -0.46
CHFR-202ENST00000315585 APOBEC3AP31941 199 aaPredicted RBP12.16□□□□□ -0.46
CHFR-202ENST00000315585 TMEM177Q53S58 311 aa12.16□□□□□ -0.46
CHFR-202ENST00000315585 DUX4L9Q6RFH8 374 aaPredicted RBP12.16□□□□□ -0.46
CHFR-202ENST00000315585 PDPNQ86YL7 162 aa12.16□□□□□ -0.46
CHFR-202ENST00000315585 LINC00311Q8N616 119 aa12.16□□□□□ -0.46
CHFR-202ENST00000315585 OR5AN1Q8NGI8 311 aa12.16□□□□□ -0.46
CHFR-202ENST00000315585 OR4P4Q8NGL7 312 aa12.16□□□□□ -0.46
CHFR-202ENST00000315585 HARBI1Q96MB7 349 aa12.16□□□□□ -0.46
CHFR-202ENST00000315585 A0A0U1RQK1 487 aa12.16□□□□□ -0.46
CHFR-202ENST00000315585 ZNF320A2RRD8 509 aa12.16□□□□□ -0.46
CHFR-202ENST00000315585 IGFBP2P18065 325 aa12.16□□□□□ -0.46
CHFR-202ENST00000315585 RPL8P62917 257 aaKnown RBP12.16□□□□□ -0.46
CHFR-202ENST00000315585 SGMS2Q8NHU3 365 aa12.16□□□□□ -0.46
CHFR-202ENST00000315585 TMEM18Q96B42 140 aa12.16□□□□□ -0.46
CHFR-202ENST00000315585 ELOVL1Q9BW60 279 aa12.16□□□□□ -0.46
CHFR-202ENST00000315585 DYNLRB1Q9NP97 96 aa12.16□□□□□ -0.46
CHFR-202ENST00000315585 B9A039 149 aa12.15□□□□□ -0.46
CHFR-202ENST00000315585 TMEM178BH3BS89 294 aa12.15□□□□□ -0.46
CHFR-202ENST00000315585 IGKV1-16P04430 117 aa12.15□□□□□ -0.46
CHFR-202ENST00000315585 SAA1P0DJI8 122 aaPredicted RBP12.15□□□□□ -0.46
CHFR-202ENST00000315585 OR10X1Q8NGY0 326 aa12.15□□□□□ -0.46
CHFR-202ENST00000315585 C1orf159Q96HA4 380 aa12.15□□□□□ -0.46
CHFR-202ENST00000315585 NABP2Q9BQ15 211 aa12.15□□□□□ -0.46
CHFR-202ENST00000315585 MRPL32Q9BYC8 188 aaKnown RBP12.15□□□□□ -0.46
CHFR-202ENST00000315585 TRAPPC1Q9Y5R8 145 aa12.15□□□□□ -0.46
CHFR-202ENST00000315585 DYSFO75923 2080 aa12.15□□□□□ -0.46
CHFR-202ENST00000315585 TSTD3H0UI37 97 aa12.15□□□□□ -0.47
CHFR-202ENST00000315585 GATCO43716 136 aaKnown RBP12.15□□□□□ -0.47
CHFR-202ENST00000315585 MMP23AO75900 390 aa12.15□□□□□ -0.47
CHFR-202ENST00000315585 GCGP01275 180 aa12.15□□□□□ -0.47
CHFR-202ENST00000315585 MC5RP33032 325 aa12.15□□□□□ -0.47
CHFR-202ENST00000315585 CNN1P51911 297 aaKnown RBP12.15□□□□□ -0.47
CHFR-202ENST00000315585 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.14□□□□□ -0.47
CHFR-202ENST00000315585 SCO2A0A1W2PP80 73 aa12.14□□□□□ -0.47
CHFR-202ENST00000315585 E7EQL1 145 aa12.14□□□□□ -0.47
CHFR-202ENST00000315585 LINC00869P0C866 280 aa12.14□□□□□ -0.47
CHFR-202ENST00000315585 IL3RAP26951 378 aa12.14□□□□□ -0.47
CHFR-202ENST00000315585 CD69Q07108 199 aa12.14□□□□□ -0.47
CHFR-202ENST00000315585 HLA-DRB5Q30154 266 aa12.14□□□□□ -0.47
CHFR-202ENST00000315585 UTF1Q5T230 341 aa12.14□□□□□ -0.47
CHFR-202ENST00000315585 ZNF596Q8TC21 504 aa12.14□□□□□ -0.47
CHFR-202ENST00000315585 TMEM37Q8WXS4 190 aa12.14□□□□□ -0.47
CHFR-202ENST00000315585 TMEM106BQ9NUM4 274 aa12.14□□□□□ -0.47
CHFR-202ENST00000315585 TRAV20A0A0B4J274 112 aa12.13□□□□□ -0.47
CHFR-202ENST00000315585 H0YJW9 148 aa12.13□□□□□ -0.47
CHFR-202ENST00000315585 JOSD1Q15040 202 aaPredicted RBP12.13□□□□□ -0.47
CHFR-202ENST00000315585 TMEM200BQ69YZ2 307 aa12.13□□□□□ -0.47
CHFR-202ENST00000315585 TEX38Q6PEX7 206 aa12.13□□□□□ -0.47
CHFR-202ENST00000315585 DERL1Q9BUN8 251 aa12.13□□□□□ -0.47
CHFR-202ENST00000315585 NDUFA4L2Q9NRX3 87 aa12.13□□□□□ -0.47
CHFR-202ENST00000315585 KAAG1Q9UBP8 84 aa12.13□□□□□ -0.47
CHFR-202ENST00000315585 YTHDF2Q9Y5A9 579 aaKnown RBP12.13□□□□□ -0.47
CHFR-202ENST00000315585 SRRM4A7MD48 611 aaKnown RBP12.13□□□□□ -0.47
CHFR-202ENST00000315585 RNASE2P10153 161 aaKnown RBP12.13□□□□□ -0.47
CHFR-202ENST00000315585 PKIAP61925 76 aa12.13□□□□□ -0.47
CHFR-202ENST00000315585 ADORA2A-AS1P86434 159 aa12.13□□□□□ -0.47
CHFR-202ENST00000315585 PSG5Q15238 335 aa12.13□□□□□ -0.47
CHFR-202ENST00000315585 DMRTC2Q8IXT2 367 aaPredicted RBP12.13□□□□□ -0.47
CHFR-202ENST00000315585 OCC1Q8TAD7 63 aa12.13□□□□□ -0.47
CHFR-202ENST00000315585 TET2Q6N021 2002 aaPredicted RBP12.13□□□□□ -0.47
CHFR-202ENST00000315585 RP1L1Q8IWN7 2480 aaPredicted RBP12.13□□□□□ -0.47
CHFR-202ENST00000315585 OR5G3P0C626 314 aa12.12□□□□□ -0.47
CHFR-202ENST00000315585 LY6DQ14210 128 aa12.12□□□□□ -0.47
CHFR-202ENST00000315585 GAMTQ14353 236 aa12.12□□□□□ -0.47
CHFR-202ENST00000315585 LINC01560Q8TB33 94 aa12.12□□□□□ -0.47
CHFR-202ENST00000315585 TMEM167AQ8TBQ9 72 aa12.12□□□□□ -0.47
CHFR-202ENST00000315585 CCL17Q92583 94 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms