RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 TMEM61Q8N0U2 210 aa6.11□□□□□ -1.43
TPM3-203ENST00000312970 DMBX1Q8NFW5 382 aa6.11□□□□□ -1.43
TPM3-203ENST00000312970 OR52B4Q8NGK2 314 aa6.11□□□□□ -1.43
TPM3-203ENST00000312970 CACNG8Q8WXS5 425 aa6.11□□□□□ -1.43
TPM3-203ENST00000312970 BORCS5Q969J3 196 aa6.11□□□□□ -1.43
TPM3-203ENST00000312970 MARC2Q969Z3 335 aa6.11□□□□□ -1.43
TPM3-203ENST00000312970 S100A16Q96FQ6 103 aaKnown RBP6.11□□□□□ -1.43
TPM3-203ENST00000312970 FAM110AQ9BQ89 295 aa6.11□□□□□ -1.43
TPM3-203ENST00000312970 SRSF8Q9BRL6 282 aaKnown RBP6.11□□□□□ -1.43
TPM3-203ENST00000312970 WFDC10AQ9H1F0 79 aa6.11□□□□□ -1.43
TPM3-203ENST00000312970 MRPL27Q9P0M9 148 aaKnown RBP6.11□□□□□ -1.43
TPM3-203ENST00000312970 MLXQ9UH92 298 aa6.11□□□□□ -1.43
TPM3-203ENST00000312970 DNAH10Q8IVF4 4471 aa6.11□□□□□ -1.43
TPM3-203ENST00000312970 ALMS1Q8TCU4 4167 aa6.11□□□□□ -1.43
TPM3-203ENST00000312970 TRAV3A0A0B4J244 114 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 TRAV25A0A0B4J276 109 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 IGLC7A0M8Q6 106 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 TMEM213A2RRL7 107 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 MFSD2BA6NFX1 497 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 CYB5BO43169 146 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 XRCC3O43542 346 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 JTBO76095 146 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 SCAF4O95104 1147 aaKnown RBP6.1□□□□□ -1.43
TPM3-203ENST00000312970 FCER2P06734 321 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 FGF2P09038 288 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 C8orf88P0DMB2 117 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 PTBP1P26599 531 aaKnown RBP eCLIP6.1□□□□□ -1.432e-9■■■■■ 36.6
TPM3-203ENST00000312970 GNRHRP30968 328 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 ELLP55199 621 aaPredicted RBP6.1□□□□□ -1.43
TPM3-203ENST00000312970 ZNF585BQ52M93 769 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 PLET1Q6UQ28 207 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 RBPMS2Q6ZRY4 209 aaKnown RBP6.1□□□□□ -1.43
TPM3-203ENST00000312970 CROCCP3Q8IVE0 287 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 OR51H1Q8NH63 302 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 ZNF502Q8TBZ5 544 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 VN1R17PQ8TDU5 208 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 SCPEP1Q9HB40 452 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 IFT46Q9NQC8 304 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 FBXL17Q9UF56 701 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 UFC1Q9Y3C8 167 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 SELENOKQ9Y6D0 94 aa6.1□□□□□ -1.43
TPM3-203ENST00000312970 LOC102724200A0A096LPH7 203 aaPredicted RBP6.09□□□□□ -1.43
TPM3-203ENST00000312970 TEX50A0A1B0GTY4 177 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 MEIS3P1A6NDR6 274 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 PGLYRP1O75594 196 aaPredicted RBP6.09□□□□□ -1.43
TPM3-203ENST00000312970 S1PR2O95136 353 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 SERPINE2P07093 398 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 TRAPPC2P0DI81 140 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 TRAPPC2BP0DI82 140 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 OR13C7P0DN81 318 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 F2RP25116 425 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 GPR183P32249 361 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 RFX2P48378 723 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 HERV-K104P61576 105 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 ERVK-16P61578 105 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 NEDD8Q15843 81 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 AADACL3Q5VUY0 350 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 THOC7Q6I9Y2 204 aaKnown RBP6.09□□□□□ -1.43
TPM3-203ENST00000312970 SLC25A24Q6NUK1 477 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 BTNL8Q6UX41 500 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 UNQ9165/PRO28630Q6UXU0 137 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 HSD17B13Q7Z5P4 300 aaPredicted RBP6.09□□□□□ -1.43
TPM3-203ENST00000312970 TMEM17Q86X19 198 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 SLC38A6Q8IZM9 456 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 OR10W1Q8NGF6 305 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 OR1L8Q8NGR8 309 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 GGTLC1Q9BX51 225 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 QTRT1Q9BXR0 403 aaKnown RBP6.09□□□□□ -1.43
TPM3-203ENST00000312970 EHFQ9NZC4 300 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 KMT2AQ03164 3969 aa6.09□□□□□ -1.43
TPM3-203ENST00000312970 IGHV3-35A0A0C4DH35 117 aa6.08□□□□□ -1.44
TPM3-203ENST00000312970 TGOLN2O43493 480 aa6.08□□□□□ -1.44
TPM3-203ENST00000312970 PAGE4O60829 102 aa6.08□□□□□ -1.44
TPM3-203ENST00000312970 SNAPC5O75971 98 aa6.08□□□□□ -1.44
TPM3-203ENST00000312970 RPA2P15927 270 aa6.08□□□□□ -1.44
TPM3-203ENST00000312970 LPAR6P43657 344 aa6.08□□□□□ -1.44
TPM3-203ENST00000312970 WT1-ASQ06250 92 aa6.08□□□□□ -1.44
TPM3-203ENST00000312970 CMTM1Q8IZ96 169 aa6.08□□□□□ -1.44
TPM3-203ENST00000312970 CADM3Q8N126 398 aa6.08□□□□□ -1.44
TPM3-203ENST00000312970 GDPD1Q8N9F7 314 aa6.08□□□□□ -1.44
TPM3-203ENST00000312970 OR1L6Q8NGR2 347 aa6.08□□□□□ -1.44
TPM3-203ENST00000312970 MOB3AQ96BX8 217 aa6.08□□□□□ -1.44
TPM3-203ENST00000312970 DGCR14Q96DF8 476 aaKnown RBP6.08□□□□□ -1.44
TPM3-203ENST00000312970 OVOL2Q9BRP0 275 aa6.08□□□□□ -1.44
TPM3-203ENST00000312970 ZNF2Q9BSG1 426 aaPredicted RBP6.08□□□□□ -1.44
TPM3-203ENST00000312970 ZNF436Q9C0F3 470 aaPredicted RBP6.08□□□□□ -1.44
TPM3-203ENST00000312970 C5orf66Q9H5L9 145 aa6.08□□□□□ -1.44
TPM3-203ENST00000312970 NDUFA4L2Q9NRX3 87 aa6.08□□□□□ -1.44
TPM3-203ENST00000312970 COMMD9Q9P000 198 aa6.08□□□□□ -1.44
TPM3-203ENST00000312970 OR2T8A6NH00 312 aa6.07□□□□□ -1.44
TPM3-203ENST00000312970 MARCH11A6NNE9 402 aa6.07□□□□□ -1.44
TPM3-203ENST00000312970 B5MCH6 92 aa6.07□□□□□ -1.44
TPM3-203ENST00000312970 KRASP01116 189 aa6.07□□□□□ -1.44
TPM3-203ENST00000312970 PMP2P02689 132 aa6.07□□□□□ -1.44
TPM3-203ENST00000312970 RLN1P04808 185 aa6.07□□□□□ -1.44
TPM3-203ENST00000312970 PRSS3P35030 304 aa6.07□□□□□ -1.44
TPM3-203ENST00000312970 RPS19P39019 145 aaKnown RBP6.07□□□□□ -1.44
TPM3-203ENST00000312970 TAS2R46P59540 309 aa6.07□□□□□ -1.44
TPM3-203ENST00000312970 KCTD21Q4G0X4 260 aa6.07□□□□□ -1.44
TPM3-203ENST00000312970 UBE2NLQ5JXB2 153 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms