RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CACNG5Q9UF02 275 aa9.19□□□□□ -0.94
SCFD1-201ENST00000311943 RABL2BQ9UNT1 228 aa9.19□□□□□ -0.94
SCFD1-201ENST00000311943 A0A0G2JLM5 398 aa9.19□□□□□ -0.94
SCFD1-201ENST00000311943 IZUMO1RA6ND01 250 aa9.19□□□□□ -0.94
SCFD1-201ENST00000311943 MPTX1A8MV57 137 aa9.19□□□□□ -0.94
SCFD1-201ENST00000311943 CLEC3BP05452 202 aa9.19□□□□□ -0.94
SCFD1-201ENST00000311943 ANXA7P20073 488 aaKnown RBP9.19□□□□□ -0.94
SCFD1-201ENST00000311943 VAMP1P23763 118 aa9.19□□□□□ -0.94
SCFD1-201ENST00000311943 GPR183P32249 361 aa9.19□□□□□ -0.94
SCFD1-201ENST00000311943 ECI1P42126 302 aa9.19□□□□□ -0.94
SCFD1-201ENST00000311943 LSM10Q969L4 123 aaKnown RBP9.19□□□□□ -0.94
SCFD1-201ENST00000311943 AIFM2Q9BRQ8 373 aa9.19□□□□□ -0.94
SCFD1-201ENST00000311943 PRNDQ9UKY0 176 aa9.19□□□□□ -0.94
SCFD1-201ENST00000311943 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.18□□□□□ -0.94
SCFD1-201ENST00000311943 K7EIM0 57 aa9.18□□□□□ -0.94
SCFD1-201ENST00000311943 BRI3O95415 125 aa9.18□□□□□ -0.94
SCFD1-201ENST00000311943 IFNA17P01571 189 aa9.18□□□□□ -0.94
SCFD1-201ENST00000311943 HSPE1P61604 102 aaKnown RBP9.18□□□□□ -0.94
SCFD1-201ENST00000311943 PRCDQ00LT1 54 aa9.18□□□□□ -0.94
SCFD1-201ENST00000311943 EGFEM1PQ0D2K5 195 aa9.18□□□□□ -0.94
SCFD1-201ENST00000311943 ACSM6Q6P461 480 aa9.18□□□□□ -0.94
SCFD1-201ENST00000311943 SGPP2Q8IWX5 399 aa9.18□□□□□ -0.94
SCFD1-201ENST00000311943 UBAC2Q8NBM4 344 aa9.18□□□□□ -0.94
SCFD1-201ENST00000311943 OR52B4Q8NGK2 314 aa9.18□□□□□ -0.94
SCFD1-201ENST00000311943 RNASE11Q8TAA1 199 aaKnown RBP9.18□□□□□ -0.94
SCFD1-201ENST00000311943 SCARB1Q8WTV0 552 aa9.18□□□□□ -0.94
SCFD1-201ENST00000311943 RBPMSQ93062 196 aaKnown RBP9.18□□□□□ -0.94
SCFD1-201ENST00000311943 PINX1Q96BK5 328 aaKnown RBP9.18□□□□□ -0.94
SCFD1-201ENST00000311943 MISP3Q96FF7 219 aa9.18□□□□□ -0.94
SCFD1-201ENST00000311943 USMG5Q96IX5 58 aa9.18□□□□□ -0.94
SCFD1-201ENST00000311943 F11RQ9Y624 299 aaKnown RBP9.18□□□□□ -0.94
SCFD1-201ENST00000311943 DNAH9Q9NYC9 4486 aa9.17□□□□□ -0.94
SCFD1-201ENST00000311943 OR2T8A6NH00 312 aa9.17□□□□□ -0.94
SCFD1-201ENST00000311943 FAM223BA6NKX1 122 aa9.17□□□□□ -0.94
SCFD1-201ENST00000311943 SPNP16150 400 aa9.17□□□□□ -0.94
SCFD1-201ENST00000311943 FAM223AQ8IWN6 122 aa9.17□□□□□ -0.94
SCFD1-201ENST00000311943 OR2C3Q8N628 320 aa9.17□□□□□ -0.94
SCFD1-201ENST00000311943 OR5B3Q8NH48 314 aa9.17□□□□□ -0.94
SCFD1-201ENST00000311943 MRAPQ8TCY5 172 aa9.17□□□□□ -0.94
SCFD1-201ENST00000311943 TMEM170AQ8WVE7 144 aa9.17□□□□□ -0.94
SCFD1-201ENST00000311943 TMEM56Q96MV1 263 aa9.17□□□□□ -0.94
SCFD1-201ENST00000311943 CHRDL1Q9BU40 450 aa9.17□□□□□ -0.94
SCFD1-201ENST00000311943 FAM212BQ9NTI7 297 aaPredicted RBP9.17□□□□□ -0.94
SCFD1-201ENST00000311943 TMEM56-RWDD3S4R434 201 aa9.17□□□□□ -0.94
SCFD1-201ENST00000311943 COL7A1Q02388 2944 aa9.17□□□□□ -0.94
SCFD1-201ENST00000311943 ADAP1O75689 374 aa9.17□□□□□ -0.94
SCFD1-201ENST00000311943 INPP1P49441 399 aa9.17□□□□□ -0.94
SCFD1-201ENST00000311943 RPEL1Q2QD12 228 aa9.17□□□□□ -0.94
SCFD1-201ENST00000311943 ZNF502Q8TBZ5 544 aa9.17□□□□□ -0.94
SCFD1-201ENST00000311943 RRNAD1Q96FB5 475 aaKnown RBP9.17□□□□□ -0.94
SCFD1-201ENST00000311943 GALNT14Q96FL9 552 aa9.17□□□□□ -0.94
SCFD1-201ENST00000311943 TBC1D24Q9ULP9 559 aa9.17□□□□□ -0.94
SCFD1-201ENST00000311943 NDUFB6O95139 128 aa9.16□□□□□ -0.94
SCFD1-201ENST00000311943 ADMP35318 185 aa9.16□□□□□ -0.94
SCFD1-201ENST00000311943 FAUP35544 74 aaKnown RBP9.16□□□□□ -0.94
SCFD1-201ENST00000311943 ARL3P36405 182 aa9.16□□□□□ -0.94
SCFD1-201ENST00000311943 AP3S2P59780 193 aa9.16□□□□□ -0.94
SCFD1-201ENST00000311943 NMSQ5H8A3 153 aa9.16□□□□□ -0.94
SCFD1-201ENST00000311943 DEFB121Q5J5C9 76 aa9.16□□□□□ -0.94
SCFD1-201ENST00000311943 SLC25A42Q86VD7 318 aa9.16□□□□□ -0.94
SCFD1-201ENST00000311943 OR9G4Q8NGQ1 327 aa9.16□□□□□ -0.94
SCFD1-201ENST00000311943 TSC22D3Q99576 134 aa9.16□□□□□ -0.94
SCFD1-201ENST00000311943 ZNF207O43670 478 aaKnown RBP9.15□□□□□ -0.94
SCFD1-201ENST00000311943 CSN3P07498 182 aa9.15□□□□□ -0.94
SCFD1-201ENST00000311943 DHODHQ02127 395 aa9.15□□□□□ -0.94
SCFD1-201ENST00000311943 C9orf66Q5T8R8 295 aa9.15□□□□□ -0.94
SCFD1-201ENST00000311943 ZNF429Q86V71 674 aa9.15□□□□□ -0.94
SCFD1-201ENST00000311943 CENPSQ8N2Z9 138 aa9.15□□□□□ -0.94
SCFD1-201ENST00000311943 FNDC4Q9H6D8 234 aaPredicted RBP9.15□□□□□ -0.94
SCFD1-201ENST00000311943 PLEKHA3Q9HB20 300 aa9.15□□□□□ -0.94
SCFD1-201ENST00000311943 TRAV6A0A075B6T7 132 aa9.15□□□□□ -0.94
SCFD1-201ENST00000311943 ZNF320A2RRD8 509 aa9.15□□□□□ -0.94
SCFD1-201ENST00000311943 I3L2K1 104 aa9.15□□□□□ -0.94
SCFD1-201ENST00000311943 MT-CO2P00403 227 aa9.15□□□□□ -0.94
SCFD1-201ENST00000311943 HOXB5P09067 269 aa9.15□□□□□ -0.94
SCFD1-201ENST00000311943 RNASE2P10153 161 aaKnown RBP9.15□□□□□ -0.94
SCFD1-201ENST00000311943 KLK9Q2XQG4 91 aa9.15□□□□□ -0.94
SCFD1-201ENST00000311943 TM4SF20Q53R12 229 aa9.15□□□□□ -0.94
SCFD1-201ENST00000311943 TMEM128Q5BJH2 165 aa9.15□□□□□ -0.94
SCFD1-201ENST00000311943 KLK9Q9UKQ9 250 aa9.15□□□□□ -0.94
SCFD1-201ENST00000311943 LYRM1O43325 122 aa9.14□□□□□ -0.95
SCFD1-201ENST00000311943 SFT2D2O95562 160 aa9.14□□□□□ -0.95
SCFD1-201ENST00000311943 DUS4LO95620 317 aaKnown RBP9.14□□□□□ -0.95
SCFD1-201ENST00000311943 LY86O95711 162 aa9.14□□□□□ -0.95
SCFD1-201ENST00000311943 HOXA1P49639 335 aaPredicted RBP9.14□□□□□ -0.95
SCFD1-201ENST00000311943 RBMS2Q15434 407 aaKnown RBP9.14□□□□□ -0.95
SCFD1-201ENST00000311943 EEF1AKMT3Q96AZ1 226 aa9.14□□□□□ -0.95
SCFD1-201ENST00000311943 KCNIP3Q9Y2W7 256 aa9.14□□□□□ -0.95
SCFD1-201ENST00000311943 IGHV3-49A0A0A0MS15 119 aa9.14□□□□□ -0.95
SCFD1-201ENST00000311943 C9orf170A2RU37 121 aa9.14□□□□□ -0.95
SCFD1-201ENST00000311943 ZP3P21754 424 aa9.14□□□□□ -0.95
SCFD1-201ENST00000311943 CADM3Q8N126 398 aa9.14□□□□□ -0.95
SCFD1-201ENST00000311943 SLC25A21Q9BQT8 299 aaPredicted RBP9.14□□□□□ -0.95
SCFD1-201ENST00000311943 MCRIP2Q9BUT9 160 aaKnown RBP9.14□□□□□ -0.95
SCFD1-201ENST00000311943 MAGT1Q9H0U3 335 aa9.14□□□□□ -0.95
SCFD1-201ENST00000311943 FKBP11Q9NYL4 201 aa9.14□□□□□ -0.95
SCFD1-201ENST00000311943 PTTG2Q9NZH5 202 aa9.14□□□□□ -0.95
SCFD1-201ENST00000311943 SORL1Q92673 2214 aa9.14□□□□□ -0.95
SCFD1-201ENST00000311943 FGF2P09038 288 aa9.13□□□□□ -0.95
SCFD1-201ENST00000311943 OR1P1Q8NH06 330 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms