RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 KPRPQ5T749 579 aaPredicted RBP15.3■□□□□ 0.04
VEGFB-201ENST00000309422 WDR12Q9GZL7 423 aaKnown RBP15.3■□□□□ 0.04
VEGFB-201ENST00000309422 IGLV11-55A0A075B6I3 123 aa15.29■□□□□ 0.04
VEGFB-201ENST00000309422 TRBV7-1A0A0A6YYK4 115 aa15.29■□□□□ 0.04
VEGFB-201ENST00000309422 A0A1B0GW64 132 aa15.29■□□□□ 0.04
VEGFB-201ENST00000309422 SUB1P53999 127 aaKnown RBP eCLIP15.29■□□□□ 0.04
VEGFB-201ENST00000309422 GLYATL2Q8WU03 294 aa15.29■□□□□ 0.04
VEGFB-201ENST00000309422 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.29■□□□□ 0.04
VEGFB-201ENST00000309422 PEMTQ9UBM1 199 aa15.29■□□□□ 0.04
VEGFB-201ENST00000309422 F11RQ9Y624 299 aaKnown RBP15.29■□□□□ 0.04
VEGFB-201ENST00000309422 TMEM56-RWDD3S4R434 201 aa15.29■□□□□ 0.04
VEGFB-201ENST00000309422 PLXNB1O43157 2135 aa15.28■□□□□ 0.04
VEGFB-201ENST00000309422 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.28■□□□□ 0.04
VEGFB-201ENST00000309422 UBE2MP61081 183 aaKnown RBP15.28■□□□□ 0.04
VEGFB-201ENST00000309422 WT1-ASQ06250 92 aa15.28■□□□□ 0.04
VEGFB-201ENST00000309422 SELENOHQ8IZQ5 122 aaKnown RBP15.28■□□□□ 0.04
VEGFB-201ENST00000309422 DLX4Q92988 240 aaPredicted RBP15.28■□□□□ 0.04
VEGFB-201ENST00000309422 CGB1A6NKQ9 187 aa15.27■□□□□ 0.04
VEGFB-201ENST00000309422 GGCTO75223 188 aaKnown RBP15.27■□□□□ 0.04
VEGFB-201ENST00000309422 DCTN2Q13561 401 aaKnown RBP15.27■□□□□ 0.04
VEGFB-201ENST00000309422 C19orf35Q6ZS72 473 aa15.27■□□□□ 0.04
VEGFB-201ENST00000309422 OR1P1Q8NH06 330 aa15.27■□□□□ 0.04
VEGFB-201ENST00000309422 TMEM230Q96A57 120 aa15.27■□□□□ 0.04
VEGFB-201ENST00000309422 FANCD2OSQ96PS1 177 aa15.27■□□□□ 0.04
VEGFB-201ENST00000309422 GAR1Q9NY12 217 aaKnown RBP15.27■□□□□ 0.04
VEGFB-201ENST00000309422 CACNG5Q9UF02 275 aa15.27■□□□□ 0.04
VEGFB-201ENST00000309422 A0A0B4J2A0 478 aa15.26■□□□□ 0.03
VEGFB-201ENST00000309422 DUXBA0A1W2PPF3 345 aa15.26■□□□□ 0.03
VEGFB-201ENST00000309422 ST8SIA3O43173 380 aa15.26■□□□□ 0.03
VEGFB-201ENST00000309422 NDUFB8O95169 186 aa15.26■□□□□ 0.03
VEGFB-201ENST00000309422 SULT1A3P0DMM9 295 aa15.26■□□□□ 0.03
VEGFB-201ENST00000309422 SULT1A4P0DMN0 295 aa15.26■□□□□ 0.03
VEGFB-201ENST00000309422 ARL3P36405 182 aa15.26■□□□□ 0.03
VEGFB-201ENST00000309422 CCR6P51684 374 aa15.26■□□□□ 0.03
VEGFB-201ENST00000309422 TMEM187Q14656 261 aa15.26■□□□□ 0.03
VEGFB-201ENST00000309422 VN1R17PQ8TDU5 208 aa15.26■□□□□ 0.03
VEGFB-201ENST00000309422 SHPKQ9UHJ6 478 aa15.26■□□□□ 0.03
VEGFB-201ENST00000309422 DBX1A6NMT0 343 aa15.25■□□□□ 0.03
VEGFB-201ENST00000309422 CORTO00230 105 aa15.25■□□□□ 0.03
VEGFB-201ENST00000309422 SCGB2A1O75556 95 aa15.25■□□□□ 0.03
VEGFB-201ENST00000309422 NDUFB6O95139 128 aa15.25■□□□□ 0.03
VEGFB-201ENST00000309422 SYNJ2BPP57105 145 aa15.25■□□□□ 0.03
VEGFB-201ENST00000309422 SPCS3P61009 180 aa15.25■□□□□ 0.03
VEGFB-201ENST00000309422 ZNF846Q147U1 533 aa15.25■□□□□ 0.03
VEGFB-201ENST00000309422 IZUMO4Q1ZYL8 232 aa15.25■□□□□ 0.03
VEGFB-201ENST00000309422 CLEC19AQ6UXS0 136 aa15.25■□□□□ 0.03
VEGFB-201ENST00000309422 OR2C3Q8N628 320 aa15.25■□□□□ 0.03
VEGFB-201ENST00000309422 MISP3Q96FF7 219 aa15.25■□□□□ 0.03
VEGFB-201ENST00000309422 A0A0B4J293 547 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 CEBPZOSA8MTT3 80 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 IGHV3-23P01764 117 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 P0C879 139 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 SPINK9Q5DT21 86 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 ZNF114Q8NC26 417 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 OR9G4Q8NGQ1 327 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 OR52E5Q8NH55 327 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 LHFPL5Q8TAF8 219 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 LYRM1O43325 122 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 LY86O95711 162 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 TRBV12-3P01733 135 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 HLA-AP01891 365 aaKnown RBP15.24■□□□□ 0.03
VEGFB-201ENST00000309422 GPR183P32249 361 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 FAM106AQ4KMX7 169 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 C4orf46Q504U0 113 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 Q56UQ5 140 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 MZT2BQ6NZ67 158 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 ACSM6Q6P461 480 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 PLET1Q6UQ28 207 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 UBAC2Q8NBM4 344 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 COQ8AQ8NI60 647 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 MRAPQ8TCY5 172 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 SDHCQ99643 169 aaPredicted RBP15.24■□□□□ 0.03
VEGFB-201ENST00000309422 HIPK2Q9H2X6 1198 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 C21orf62Q9NYP8 219 aa15.24■□□□□ 0.03
VEGFB-201ENST00000309422 MFSD2BA6NFX1 497 aa15.23■□□□□ 0.03
VEGFB-201ENST00000309422 PPP5D1E7EU14 171 aa15.23■□□□□ 0.03
VEGFB-201ENST00000309422 SFT2D2O95562 160 aa15.23■□□□□ 0.03
VEGFB-201ENST00000309422 EGFEM1PQ0D2K5 195 aa15.23■□□□□ 0.03
VEGFB-201ENST00000309422 SMCO1Q147U7 214 aa15.23■□□□□ 0.03
VEGFB-201ENST00000309422 KLK9Q2XQG4 91 aa15.23■□□□□ 0.03
VEGFB-201ENST00000309422 NOXA1Q86UR1 476 aa15.23■□□□□ 0.03
VEGFB-201ENST00000309422 OR1S1Q8NH92 325 aa15.23■□□□□ 0.03
VEGFB-201ENST00000309422 PINX1Q96BK5 328 aaKnown RBP15.23■□□□□ 0.03
VEGFB-201ENST00000309422 GPR146Q96CH1 333 aa15.23■□□□□ 0.03
VEGFB-201ENST00000309422 HEYLQ9NQ87 328 aaPredicted RBP15.23■□□□□ 0.03
VEGFB-201ENST00000309422 AURKAIP1Q9NWT8 199 aaPredicted RBP15.23■□□□□ 0.03
VEGFB-201ENST00000309422 KLK9Q9UKQ9 250 aa15.23■□□□□ 0.03
VEGFB-201ENST00000309422 S4R3C0 116 aa15.23■□□□□ 0.03
VEGFB-201ENST00000309422 BMPR1BO00238 502 aa15.22■□□□□ 0.03
VEGFB-201ENST00000309422 WIPF1O43516 503 aa15.22■□□□□ 0.03
VEGFB-201ENST00000309422 SUPT4H1P63272 117 aaKnown RBP15.22■□□□□ 0.03
VEGFB-201ENST00000309422 PPP1R1AQ13522 171 aa15.22■□□□□ 0.03
VEGFB-201ENST00000309422 KLF5Q13887 457 aaPredicted RBP15.22■□□□□ 0.03
VEGFB-201ENST00000309422 PDLIM3Q53GG5 364 aaPredicted RBP15.22■□□□□ 0.03
VEGFB-201ENST00000309422 BSCL2Q96G97 398 aaPredicted RBP15.22■□□□□ 0.03
VEGFB-201ENST00000309422 CCDC140Q96MF4 163 aa15.22■□□□□ 0.03
VEGFB-201ENST00000309422 ATP6V0BQ99437 205 aa15.22■□□□□ 0.03
VEGFB-201ENST00000309422 PRR13Q9NZ81 148 aa15.22■□□□□ 0.03
VEGFB-201ENST00000309422 TMED3Q9Y3Q3 217 aa15.22■□□□□ 0.03
VEGFB-201ENST00000309422 TNCP24821 2201 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms