RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 USF1P22415 310 aaPredicted RBP11.9□□□□□ -0.5
SCUBE2-201ENST00000309263 DUTP33316 252 aaKnown RBP11.9□□□□□ -0.5
SCUBE2-201ENST00000309263 LGALS4P56470 323 aa11.9□□□□□ -0.5
SCUBE2-201ENST00000309263 ERVK11-1P61568 191 aa11.9□□□□□ -0.5
SCUBE2-201ENST00000309263 LHFPL4Q7Z7J7 247 aa11.9□□□□□ -0.5
SCUBE2-201ENST00000309263 LYG1Q8N1E2 194 aa11.9□□□□□ -0.5
SCUBE2-201ENST00000309263 Q8N7P7 452 aa11.9□□□□□ -0.5
SCUBE2-201ENST00000309263 BCL2L2Q92843 193 aaPredicted RBP11.9□□□□□ -0.5
SCUBE2-201ENST00000309263 RNF2Q99496 336 aa11.9□□□□□ -0.5
SCUBE2-201ENST00000309263 TP73-AS1Q9UF72 201 aa11.9□□□□□ -0.5
SCUBE2-201ENST00000309263 ADAMTS20P59510 1910 aa11.9□□□□□ -0.5
SCUBE2-201ENST00000309263 PRR33A8MZF0 331 aa11.9□□□□□ -0.5
SCUBE2-201ENST00000309263 CCL11P51671 97 aa11.9□□□□□ -0.5
SCUBE2-201ENST00000309263 IBA57Q5T440 356 aaKnown RBP11.9□□□□□ -0.5
SCUBE2-201ENST00000309263 LAMTOR2Q9Y2Q5 125 aa11.9□□□□□ -0.5
SCUBE2-201ENST00000309263 SELENOKQ9Y6D0 94 aa11.9□□□□□ -0.5
SCUBE2-201ENST00000309263 SMG1Q96Q15 3661 aaKnown RBP11.9□□□□□ -0.5
SCUBE2-201ENST00000309263 GFRA3O60609 400 aa11.89□□□□□ -0.51
SCUBE2-201ENST00000309263 PLAUP00749 431 aa11.89□□□□□ -0.51
SCUBE2-201ENST00000309263 CA2P00918 260 aa11.89□□□□□ -0.51
SCUBE2-201ENST00000309263 C3orf79P0CE67 100 aa11.89□□□□□ -0.51
SCUBE2-201ENST00000309263 UTF1Q5T230 341 aa11.89□□□□□ -0.51
SCUBE2-201ENST00000309263 TRAT1Q6PIZ9 186 aa11.89□□□□□ -0.51
SCUBE2-201ENST00000309263 SLC24A4Q8NFF2 622 aa11.89□□□□□ -0.51
SCUBE2-201ENST00000309263 OTOGLQ3ZCN5 2332 aa11.89□□□□□ -0.51
SCUBE2-201ENST00000309263 ZNF83P51522 516 aa11.89□□□□□ -0.51
SCUBE2-201ENST00000309263 MFAP2P55001 183 aa11.89□□□□□ -0.51
SCUBE2-201ENST00000309263 SMIM21Q3B7S5 101 aa11.89□□□□□ -0.51
SCUBE2-201ENST00000309263 COL25A1Q9BXS0 654 aaPredicted RBP11.89□□□□□ -0.51
SCUBE2-201ENST00000309263 ZNF355PQ9NSJ1 428 aa11.89□□□□□ -0.51
SCUBE2-201ENST00000309263 RELNP78509 3460 aa11.89□□□□□ -0.51
SCUBE2-201ENST00000309263 FAM208BQ5VWN6 2430 aa11.89□□□□□ -0.51
SCUBE2-201ENST00000309263 MRPS11P82912 194 aaKnown RBP11.89□□□□□ -0.51
SCUBE2-201ENST00000309263 ACP7Q6ZNF0 438 aa11.89□□□□□ -0.51
SCUBE2-201ENST00000309263 UQCR10Q9UDW1 63 aa11.89□□□□□ -0.51
SCUBE2-201ENST00000309263 A0A1W2PS18 150 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 PEAR1Q5VY43 1037 aaPredicted RBP11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 SLC35E4Q6ICL7 350 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 TLN2Q9Y4G6 2542 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 RELBQ01201 579 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 VAMP3Q15836 100 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 PMCHL1Q16048 86 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 C1orf174Q8IYL3 243 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 Q8TCH9 128 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 LOXL4Q96JB6 756 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 TRIB1Q96RU8 372 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 MPDU1O75352 247 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 PROP1O75360 226 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 HYPMO75409 117 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 APCSP02743 223 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 CYC1P08574 325 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 P0C879 139 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 PRDX2P32119 198 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 PRB3Q04118 309 aaPredicted RBP11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 RND1Q92730 232 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 NABP2Q9BQ15 211 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 ZFP30Q9Y2G7 519 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 MRPS18CQ9Y3D5 142 aaKnown RBP11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 NAV3Q8IVL0 2385 aa11.88□□□□□ -0.51
SCUBE2-201ENST00000309263 M0R2Z0 102 aa11.87□□□□□ -0.51
SCUBE2-201ENST00000309263 WDR82Q6UXN9 313 aa11.87□□□□□ -0.51
SCUBE2-201ENST00000309263 IL19Q9UHD0 177 aa11.87□□□□□ -0.51
SCUBE2-201ENST00000309263 V9GYV3 84 aa11.87□□□□□ -0.51
SCUBE2-201ENST00000309263 YPEL1O60688 119 aa11.87□□□□□ -0.51
SCUBE2-201ENST00000309263 SS18L1O75177 396 aaPredicted RBP11.87□□□□□ -0.51
SCUBE2-201ENST00000309263 CD24P25063 80 aa11.87□□□□□ -0.51
SCUBE2-201ENST00000309263 STUMQ69YW2 141 aa11.87□□□□□ -0.51
SCUBE2-201ENST00000309263 CSPG4Q6UVK1 2322 aa11.87□□□□□ -0.51
SCUBE2-201ENST00000309263 RAB1CQ92928 201 aa11.87□□□□□ -0.51
SCUBE2-201ENST00000309263 YPEL2Q96QA6 119 aa11.87□□□□□ -0.51
SCUBE2-201ENST00000309263 TRAV5A0A0B4J249 113 aa11.87□□□□□ -0.51
SCUBE2-201ENST00000309263 ZNF324O75467 553 aaPredicted RBP11.87□□□□□ -0.51
SCUBE2-201ENST00000309263 ZNF134P52741 427 aa11.87□□□□□ -0.51
SCUBE2-201ENST00000309263 SELENOTP62341 195 aa11.87□□□□□ -0.51
SCUBE2-201ENST00000309263 VWC2Q2TAL6 325 aa11.87□□□□□ -0.51
SCUBE2-201ENST00000309263 KCNS1Q96KK3 526 aa11.87□□□□□ -0.51
SCUBE2-201ENST00000309263 ARL2-SNX15V9GYD0 113 aa11.87□□□□□ -0.51
SCUBE2-201ENST00000309263 FOXA3P55318 350 aaPredicted RBP11.86□□□□□ -0.51
SCUBE2-201ENST00000309263 RELQ04864 619 aaPredicted RBP11.86□□□□□ -0.51
SCUBE2-201ENST00000309263 OR2D3Q8NGH3 330 aa11.86□□□□□ -0.51
SCUBE2-201ENST00000309263 FAM168AQ92567 244 aa11.86□□□□□ -0.51
SCUBE2-201ENST00000309263 GMPPAQ96IJ6 420 aaPredicted RBP11.86□□□□□ -0.51
SCUBE2-201ENST00000309263 ZNRD1Q9P1U0 126 aa11.86□□□□□ -0.51
SCUBE2-201ENST00000309263 TRGV5A0A0B4J1U4 118 aa11.86□□□□□ -0.51
SCUBE2-201ENST00000309263 M0QZ24 198 aa11.86□□□□□ -0.51
SCUBE2-201ENST00000309263 TOX4O94842 621 aa11.86□□□□□ -0.51
SCUBE2-201ENST00000309263 RPL8P62917 257 aaKnown RBP11.86□□□□□ -0.51
SCUBE2-201ENST00000309263 SRSF6Q13247 344 aaKnown RBP11.86□□□□□ -0.51
SCUBE2-201ENST00000309263 ZNF718Q3SXZ3 478 aa11.86□□□□□ -0.51
SCUBE2-201ENST00000309263 CD46P15529 392 aa11.86□□□□□ -0.51
SCUBE2-201ENST00000309263 IGHV1-2P23083 117 aa11.86□□□□□ -0.51
SCUBE2-201ENST00000309263 CD177Q8N6Q3 437 aa11.86□□□□□ -0.51
SCUBE2-201ENST00000309263 TCTEX1D1Q8N7M0 179 aa11.86□□□□□ -0.51
SCUBE2-201ENST00000309263 MCRIP2Q9BUT9 160 aaKnown RBP11.86□□□□□ -0.51
SCUBE2-201ENST00000309263 KLRC4-KLRK1H3BQV0 150 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 COMPP49747 757 aaPredicted RBP11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 UBE2L3P68036 154 aaKnown RBP11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 OR4C5Q8NGB2 326 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 CDC42EP3Q9UKI2 254 aa11.85□□□□□ -0.51
SCUBE2-201ENST00000309263 BMPR1BO00238 502 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms