RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 A0A0G2JMM0 328 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 A0A1W2PPB8 328 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 A0A1W2PPE3 182 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 KIR3DP1A8MWS1 328 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 SMRP1Q8NCR6 262 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 ZNF414Q96IQ9 312 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 NXT2Q9NPJ8 142 aaKnown RBP7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 ST6GALNAC2Q9UJ37 374 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 TMEM189A5PLL7 270 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 GZMBP10144 247 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 RTN4RL2Q86UN3 420 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 TAF15Q92804 592 aaKnown RBP eCLIP7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 TLN2Q9Y4G6 2542 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 COL18A1P39060 1754 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 CCL3P10147 92 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 ZIC1Q15915 447 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 TEX38Q6PEX7 206 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 EML6Q6ZMW3 1958 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 THY1P04216 161 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 LGALS3P17931 250 aaKnown RBP7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 HSD52Q0P140 79 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 TIMM23BQ5SRD1 257 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 CCL13Q99616 98 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 TRBV5-7A0A0A0MS05 114 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 PRDX2P32119 198 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 PSG6Q00889 435 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 WDYHV1Q96HA8 205 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 VGLL1Q99990 258 aa7.14□□□□□ -1.27
PPARGC1B-201ENST00000309241 PRR33A8MZF0 331 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 SPINK8P0C7L1 97 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 LIMS1P48059 325 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 C2orf68Q2NKX9 166 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 GCSAMLQ5JQS6 135 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 TMEM144Q7Z5S9 345 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 ITLN2Q8WWU7 325 aaPredicted RBP7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 UBR3Q6ZT12 1888 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 FOXH1O75593 365 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 CKS2P33552 79 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 SOSTQ9BQB4 213 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 SIRT4Q9Y6E7 314 aaPredicted RBP7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 SHANK3Q9BYB0 1731 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 PPIAL4CA0A0B4J2A2 164 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 CD5P06127 495 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 PPIAL4GP0DN37 164 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 LIFP15018 202 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 FGF12P61328 243 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 PGLYRP3Q96LB9 341 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 PTPRDP23468 1912 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 RNASEH2CQ8TDP1 164 aaKnown RBP7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 COL5A3P25940 1745 aaPredicted RBP7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 ZFHX2Q9C0A1 2572 aaPredicted RBP7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 TMEM249Q2WGJ8 235 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 FAM168AQ92567 244 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 KLF2Q9Y5W3 355 aaPredicted RBP7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 CDK2AP2O75956 126 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 J3QR06 171 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 KIAA1644Q3SXP7 199 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 RFLNBQ8N5W9 214 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 OR8B12Q8NGG6 310 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 FRRS1LQ9P0K9 344 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 LIPT2A6NK58 231 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 WISP3O95389 354 aaPredicted RBP7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 FOXL1Q12952 345 aa7.13□□□□□ -1.27
PPARGC1B-201ENST00000309241 A0A0G2JLM5 398 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 A0A1W2PPC1 479 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 MALP21145 153 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 LHX8Q68G74 356 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 DMRTC2Q8IXT2 367 aaPredicted RBP7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 OR2K2Q8NGT1 345 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 OR52E5Q8NH55 327 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 IGKV3-20P01619 116 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 C8orf88P0DMB2 117 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 FOXC2Q99958 501 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 F8VVB4 439 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 F8VWA3 439 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 PAX1P15863 534 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 LINC01545Q5VT33 79 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 GTSCR1Q86UQ5 136 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 COX14Q96I36 57 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 SS18L2Q9UHA2 77 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 DTX4Q9Y2E6 619 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 RPL27AP46776 148 aaKnown RBP7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 PCSK4Q6UW60 755 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 PRSS41Q7RTY9 318 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 FAM19A2Q8N3H0 131 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 CXCL1P09341 107 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 MRPL27Q9P0M9 148 aaKnown RBP7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 CEACAM4O75871 244 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 EEF1AKMT3Q96AZ1 226 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 IL36BQ9NZH7 164 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 GREB1LQ9C091 1923 aaPredicted RBP7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 LRRK2Q5S007 2527 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 AHRRA9YTQ3 701 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 COL9A1P20849 921 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 MRGPRFQ96AM1 343 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 C5orf66Q9H5L9 145 aa7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 MRPS18BQ9Y676 258 aaKnown RBP7.12□□□□□ -1.27
PPARGC1B-201ENST00000309241 GZMMP51124 257 aa7.11□□□□□ -1.27
PPARGC1B-201ENST00000309241 GAGE2BQ13066 116 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms