RNA–Protein interactions for RNA: ENST00000308664.10

ATP2A2-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-201ENST00000308664 ARFGEF3Q5TH69 2177 aa15.3■□□□□ 0.04
ATP2A2-201ENST00000308664 COX5BP10606 129 aa15.29■□□□□ 0.04
ATP2A2-201ENST00000308664 RPL7P18124 248 aaKnown RBP15.29■□□□□ 0.04
ATP2A2-201ENST00000308664 LGALS7P47929 136 aa15.29■□□□□ 0.04
ATP2A2-201ENST00000308664 C9orf106Q8NAJ2 232 aa15.29■□□□□ 0.04
ATP2A2-201ENST00000308664 IGFBP2P18065 325 aa15.29■□□□□ 0.04
ATP2A2-201ENST00000308664 SELENOTP62341 195 aa15.29■□□□□ 0.04
ATP2A2-201ENST00000308664 RNASE7Q9H1E1 156 aaKnown RBP15.29■□□□□ 0.04
ATP2A2-201ENST00000308664 PRDM13Q9H4Q3 707 aa15.29■□□□□ 0.04
ATP2A2-201ENST00000308664 TMEM242Q9NWH2 141 aa15.29■□□□□ 0.04
ATP2A2-201ENST00000308664 NTN3O00634 580 aaPredicted RBP15.29■□□□□ 0.04
ATP2A2-201ENST00000308664 NPIPB3Q92617 1050 aa15.29■□□□□ 0.04
ATP2A2-201ENST00000308664 SNRNP40Q96DI7 357 aaKnown RBP15.29■□□□□ 0.04
ATP2A2-201ENST00000308664 LY6DQ14210 128 aa15.29■□□□□ 0.04
ATP2A2-201ENST00000308664 OCC1Q8TAD7 63 aa15.29■□□□□ 0.04
ATP2A2-201ENST00000308664 COL25A1Q9BXS0 654 aaPredicted RBP15.28■□□□□ 0.04
ATP2A2-201ENST00000308664 THSD7BQ9C0I4 1608 aa15.28■□□□□ 0.04
ATP2A2-201ENST00000308664 IGHV3OR16-10A0A075B7F0 116 aa15.28■□□□□ 0.04
ATP2A2-201ENST00000308664 ZNF324BQ6AW86 544 aaPredicted RBP15.28■□□□□ 0.04
ATP2A2-201ENST00000308664 PLPPR1Q8TBJ4 325 aa15.28■□□□□ 0.04
ATP2A2-201ENST00000308664 GTF3AQ92664 365 aaKnown RBP15.28■□□□□ 0.04
ATP2A2-201ENST00000308664 DPF1Q92782 380 aa15.28■□□□□ 0.04
ATP2A2-201ENST00000308664 ZNF430Q9H8G1 570 aaPredicted RBP15.28■□□□□ 0.04
ATP2A2-201ENST00000308664 IGKV1-27A0A075B6S5 117 aa15.28■□□□□ 0.04
ATP2A2-201ENST00000308664 RAMP3O60896 148 aa15.28■□□□□ 0.04
ATP2A2-201ENST00000308664 HTN1P15515 57 aa15.28■□□□□ 0.04
ATP2A2-201ENST00000308664 PTGDSP41222 190 aa15.28■□□□□ 0.04
ATP2A2-201ENST00000308664 SRSF9Q13242 221 aaKnown RBP eCLIP15.28■□□□□ 0.04
ATP2A2-201ENST00000308664 SRSF12Q8WXF0 261 aaKnown RBP15.28■□□□□ 0.04
ATP2A2-201ENST00000308664 C1QTNF5Q9BXJ0 243 aa15.28■□□□□ 0.04
ATP2A2-201ENST00000308664 HIGD1AQ9Y241 93 aa15.28■□□□□ 0.04
ATP2A2-201ENST00000308664 F11RQ9Y624 299 aaKnown RBP15.28■□□□□ 0.04
ATP2A2-201ENST00000308664 LOC102723996A0A087X1L8 192 aa15.27■□□□□ 0.04
ATP2A2-201ENST00000308664 F5H697 171 aa15.27■□□□□ 0.04
ATP2A2-201ENST00000308664 CLEC2AQ6UVW9 174 aa15.27■□□□□ 0.04
ATP2A2-201ENST00000308664 WBP1Q96G27 269 aa15.27■□□□□ 0.04
ATP2A2-201ENST00000308664 FNDC1Q4ZHG4 1894 aaPredicted RBP15.27■□□□□ 0.04
ATP2A2-201ENST00000308664 FABP2P12104 132 aa15.27■□□□□ 0.04
ATP2A2-201ENST00000308664 SLC25A53Q5H9E4 307 aa15.27■□□□□ 0.04
ATP2A2-201ENST00000308664 PCSK4Q6UW60 755 aa15.27■□□□□ 0.04
ATP2A2-201ENST00000308664 C1RLQ9NZP8 487 aa15.27■□□□□ 0.04
ATP2A2-201ENST00000308664 ANKHD1Q8IWZ3 2542 aaKnown RBP15.27■□□□□ 0.04
ATP2A2-201ENST00000308664 IGHV2-70P01814 119 aa15.27■□□□□ 0.03
ATP2A2-201ENST00000308664 LYL1P12980 280 aa15.27■□□□□ 0.03
ATP2A2-201ENST00000308664 HSPB7Q9UBY9 170 aa15.27■□□□□ 0.03
ATP2A2-201ENST00000308664 CDC42EP3Q9UKI2 254 aa15.27■□□□□ 0.03
ATP2A2-201ENST00000308664 REG1AP05451 166 aa15.27■□□□□ 0.03
ATP2A2-201ENST00000308664 GZMBP10144 247 aa15.27■□□□□ 0.03
ATP2A2-201ENST00000308664 FADS6Q8N9I5 356 aa15.27■□□□□ 0.03
ATP2A2-201ENST00000308664 SFXN3Q9BWM7 321 aa15.27■□□□□ 0.03
ATP2A2-201ENST00000308664 OR2T8A6NH00 312 aa15.26■□□□□ 0.03
ATP2A2-201ENST00000308664 SLC25A17O43808 307 aa15.26■□□□□ 0.03
ATP2A2-201ENST00000308664 RPL27AP46776 148 aaKnown RBP15.26■□□□□ 0.03
ATP2A2-201ENST00000308664 PRB3Q04118 309 aaPredicted RBP15.26■□□□□ 0.03
ATP2A2-201ENST00000308664 FGFBP3Q8TAT2 258 aa15.26■□□□□ 0.03
ATP2A2-201ENST00000308664 EAF1Q96JC9 268 aaPredicted RBP15.26■□□□□ 0.03
ATP2A2-201ENST00000308664 DCAF16Q9NXF7 216 aa15.26■□□□□ 0.03
ATP2A2-201ENST00000308664 KLRB1Q12918 225 aa15.26■□□□□ 0.03
ATP2A2-201ENST00000308664 PSG7Q13046 419 aa15.26■□□□□ 0.03
ATP2A2-201ENST00000308664 MIR17HGQ75NE6 70 aa15.26■□□□□ 0.03
ATP2A2-201ENST00000308664 SLC25A33Q9BSK2 321 aa15.26■□□□□ 0.03
ATP2A2-201ENST00000308664 MRPL37Q9BZE1 423 aaKnown RBP15.26■□□□□ 0.03
ATP2A2-201ENST00000308664 PLXND1Q9Y4D7 1925 aa15.26■□□□□ 0.03
ATP2A2-201ENST00000308664 IGHV3-35A0A0C4DH35 117 aa15.25■□□□□ 0.03
ATP2A2-201ENST00000308664 A0A1B0GW64 132 aa15.25■□□□□ 0.03
ATP2A2-201ENST00000308664 CKS2P33552 79 aa15.25■□□□□ 0.03
ATP2A2-201ENST00000308664 ATP5J2P56134 94 aa15.25■□□□□ 0.03
ATP2A2-201ENST00000308664 C17orf82Q86X59 251 aaPredicted RBP15.25■□□□□ 0.03
ATP2A2-201ENST00000308664 OR13A1Q8NGR1 328 aa15.25■□□□□ 0.03
ATP2A2-201ENST00000308664 ALKBH7Q9BT30 221 aaPredicted RBP15.25■□□□□ 0.03
ATP2A2-201ENST00000308664 IGHV1-2P23083 117 aa15.25■□□□□ 0.03
ATP2A2-201ENST00000308664 CA7P43166 264 aa15.25■□□□□ 0.03
ATP2A2-201ENST00000308664 HOXA4Q00056 320 aaPredicted RBP15.25■□□□□ 0.03
ATP2A2-201ENST00000308664 ASCL5Q7RTU5 278 aa15.25■□□□□ 0.03
ATP2A2-201ENST00000308664 VOPP1Q96AW1 172 aa15.25■□□□□ 0.03
ATP2A2-201ENST00000308664 JPT1Q9UK76 154 aa15.25■□□□□ 0.03
ATP2A2-201ENST00000308664 NMSQ5H8A3 153 aa15.25■□□□□ 0.03
ATP2A2-201ENST00000308664 SPSB3Q6PJ21 355 aa15.25■□□□□ 0.03
ATP2A2-201ENST00000308664 C2orf88Q9BSF0 95 aa15.25■□□□□ 0.03
ATP2A2-201ENST00000308664 DLEU1O43261 78 aa15.24■□□□□ 0.03
ATP2A2-201ENST00000308664 LHX2P50458 406 aa15.24■□□□□ 0.03
ATP2A2-201ENST00000308664 DERL1Q9BUN8 251 aa15.24■□□□□ 0.03
ATP2A2-201ENST00000308664 AP5S1Q9NUS5 200 aa15.24■□□□□ 0.03
ATP2A2-201ENST00000308664 TRAV24A0A0B4J272 114 aa15.24■□□□□ 0.03
ATP2A2-201ENST00000308664 PMCHL2Q9BQD1 86 aa15.24■□□□□ 0.03
ATP2A2-201ENST00000308664 MALRD1Q5VYJ5 2156 aa15.24■□□□□ 0.03
ATP2A2-201ENST00000308664 TRAV1-1A0A0B4J248 108 aa15.24■□□□□ 0.03
ATP2A2-201ENST00000308664 EREGO14944 169 aa15.24■□□□□ 0.03
ATP2A2-201ENST00000308664 CLDN18P56856 261 aa15.24■□□□□ 0.03
ATP2A2-201ENST00000308664 TEX38Q6PEX7 206 aa15.24■□□□□ 0.03
ATP2A2-201ENST00000308664 NIT1Q86X76 327 aa15.24■□□□□ 0.03
ATP2A2-201ENST00000308664 WFDC3Q8IUB2 231 aa15.24■□□□□ 0.03
ATP2A2-201ENST00000308664 TMEM208Q9BTX3 173 aa15.23■□□□□ 0.03
ATP2A2-201ENST00000308664 GLRXP35754 106 aa15.23■□□□□ 0.03
ATP2A2-201ENST00000308664 HBBP68871 147 aa15.23■□□□□ 0.03
ATP2A2-201ENST00000308664 TWIST1Q15672 202 aa15.23■□□□□ 0.03
ATP2A2-201ENST00000308664 TIMM23BQ5SRD1 257 aa15.23■□□□□ 0.03
ATP2A2-201ENST00000308664 C1orf194Q5T5A4 169 aa15.23■□□□□ 0.03
ATP2A2-201ENST00000308664 ZNF841Q6ZN19 808 aa15.23■□□□□ 0.03
ATP2A2-201ENST00000308664 BEND2Q8NDZ0 799 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms