RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ELOVL5Q9NYP7 299 aa10.66□□□□□ -0.7
USP38-201ENST00000307017 ZNF318Q5VUA4 2279 aa10.66□□□□□ -0.7
USP38-201ENST00000307017 IGHV1-69-2A0A0G2JMI3 117 aa10.66□□□□□ -0.7
USP38-201ENST00000307017 EGR4Q05215 589 aa10.66□□□□□ -0.7
USP38-201ENST00000307017 ZNF107Q9UII5 783 aaPredicted RBP10.66□□□□□ -0.7
USP38-201ENST00000307017 CACNA1DQ01668 2161 aa10.66□□□□□ -0.7
USP38-201ENST00000307017 LINC00205P59089 165 aa10.66□□□□□ -0.7
USP38-201ENST00000307017 COQ2Q96H96 371 aa10.66□□□□□ -0.7
USP38-201ENST00000307017 ZBTB34Q8NCN2 500 aa10.66□□□□□ -0.7
USP38-201ENST00000307017 OR10W1Q8NGF6 305 aa10.66□□□□□ -0.7
USP38-201ENST00000307017 LINC00477Q96M19 166 aa10.66□□□□□ -0.7
USP38-201ENST00000307017 NPIPB4C9JG80 1138 aa10.66□□□□□ -0.7
USP38-201ENST00000307017 SHISA5Q8N114 240 aa10.66□□□□□ -0.7
USP38-201ENST00000307017 PIMREGQ9BSJ6 248 aa10.66□□□□□ -0.7
USP38-201ENST00000307017 EEF1AKMT3Q96AZ1 226 aa10.65□□□□□ -0.7
USP38-201ENST00000307017 SPOCK3Q9BQ16 436 aa10.65□□□□□ -0.7
USP38-201ENST00000307017 FBXL7Q9UJT9 491 aa10.65□□□□□ -0.7
USP38-201ENST00000307017 CCDC144NLQ6NUI1 221 aa10.65□□□□□ -0.7
USP38-201ENST00000307017 NRN1Q9NPD7 142 aa10.65□□□□□ -0.7
USP38-201ENST00000307017 IGKV2-40A0A087WW87 121 aaPredicted RBP10.65□□□□□ -0.7
USP38-201ENST00000307017 IGKV2D-40P01614 121 aaPredicted RBP10.65□□□□□ -0.7
USP38-201ENST00000307017 CGB7P0DN87 165 aa10.65□□□□□ -0.7
USP38-201ENST00000307017 NBEAP1P0C6P0 100 aa10.65□□□□□ -0.7
USP38-201ENST00000307017 CD300EQ496F6 205 aaPredicted RBP10.65□□□□□ -0.7
USP38-201ENST00000307017 COX19Q49B96 90 aa10.65□□□□□ -0.7
USP38-201ENST00000307017 TRGV2A0A075B6R0 118 aa10.65□□□□□ -0.71
USP38-201ENST00000307017 PRR19A6NJB7 356 aa10.65□□□□□ -0.71
USP38-201ENST00000307017 CGB3P0DN86 165 aa10.65□□□□□ -0.71
USP38-201ENST00000307017 ZNF474Q6S9Z5 364 aaPredicted RBP10.65□□□□□ -0.71
USP38-201ENST00000307017 WFDC1Q9HC57 220 aa10.65□□□□□ -0.71
USP38-201ENST00000307017 A0A1W2PS18 150 aa10.64□□□□□ -0.71
USP38-201ENST00000307017 MEF2CQ06413 473 aaPredicted RBP10.64□□□□□ -0.71
USP38-201ENST00000307017 LOXL4Q96JB6 756 aa10.64□□□□□ -0.71
USP38-201ENST00000307017 HEATR1Q9H583 2144 aaKnown RBP10.64□□□□□ -0.71
USP38-201ENST00000307017 MYOD1P15172 320 aa10.64□□□□□ -0.71
USP38-201ENST00000307017 ZNF138P52744 262 aa10.64□□□□□ -0.71
USP38-201ENST00000307017 CLDND2Q8NHS1 167 aa10.64□□□□□ -0.71
USP38-201ENST00000307017 AICDAQ9GZX7 198 aa10.64□□□□□ -0.71
USP38-201ENST00000307017 A0A087X0K7 114 aa10.64□□□□□ -0.71
USP38-201ENST00000307017 TRBV5-7A0A0A0MS05 114 aa10.64□□□□□ -0.71
USP38-201ENST00000307017 STARD6P59095 220 aa10.64□□□□□ -0.71
USP38-201ENST00000307017 FAM106AQ4KMX7 169 aa10.64□□□□□ -0.71
USP38-201ENST00000307017 TRAV8-4A0A0B4J246 113 aa10.64□□□□□ -0.71
USP38-201ENST00000307017 SRP19P09132 144 aaKnown RBP10.64□□□□□ -0.71
USP38-201ENST00000307017 OR10J3Q5JRS4 329 aa10.64□□□□□ -0.71
USP38-201ENST00000307017 GATD1Q8NB37 220 aa10.64□□□□□ -0.71
USP38-201ENST00000307017 SEPSECSQ9HD40 501 aaKnown RBP10.64□□□□□ -0.71
USP38-201ENST00000307017 CXCL1P09341 107 aa10.64□□□□□ -0.71
USP38-201ENST00000307017 ISXQ2M1V0 245 aa10.64□□□□□ -0.71
USP38-201ENST00000307017 USP54Q70EL1 1684 aa10.64□□□□□ -0.71
USP38-201ENST00000307017 NPIPB11E5RHQ5 1161 aa10.64□□□□□ -0.71
USP38-201ENST00000307017 ASIPP42127 132 aa10.64□□□□□ -0.71
USP38-201ENST00000307017 SNRPD3P62318 126 aaKnown RBP10.64□□□□□ -0.71
USP38-201ENST00000307017 C2orf88Q9BSF0 95 aa10.64□□□□□ -0.71
USP38-201ENST00000307017 COX6A1P12074 109 aa10.63□□□□□ -0.71
USP38-201ENST00000307017 SPATA31B1PQ5VZV4 182 aa10.63□□□□□ -0.71
USP38-201ENST00000307017 SEMA5BQ9P283 1151 aa10.63□□□□□ -0.71
USP38-201ENST00000307017 ICE1Q9Y2F5 2266 aa10.63□□□□□ -0.71
USP38-201ENST00000307017 SMKR1H3BMG3 65 aa10.63□□□□□ -0.71
USP38-201ENST00000307017 MT-ND6P03923 174 aa10.63□□□□□ -0.71
USP38-201ENST00000307017 HOXA5P20719 270 aa10.63□□□□□ -0.71
USP38-201ENST00000307017 TRPM3Q9HCF6 1732 aaPredicted RBP10.63□□□□□ -0.71
USP38-201ENST00000307017 GTSF1LQ9H1H1 148 aa10.63□□□□□ -0.71
USP38-201ENST00000307017 RPP21Q9H633 154 aaKnown RBP10.63□□□□□ -0.71
USP38-201ENST00000307017 PHLDA1Q8WV24 401 aaPredicted RBP10.63□□□□□ -0.71
USP38-201ENST00000307017 DIDO1Q9BTC0 2240 aaKnown RBP10.63□□□□□ -0.71
USP38-201ENST00000307017 IGKV1D-13A0A0B4J2D9 117 aa10.63□□□□□ -0.71
USP38-201ENST00000307017 HBDP02042 147 aa10.63□□□□□ -0.71
USP38-201ENST00000307017 IGKV1-13P0DP09 117 aa10.63□□□□□ -0.71
USP38-201ENST00000307017 RPL23P62829 140 aaKnown RBP10.63□□□□□ -0.71
USP38-201ENST00000307017 BSPH1Q075Z2 132 aa10.63□□□□□ -0.71
USP38-201ENST00000307017 GCSAMQ8N6F7 178 aa10.63□□□□□ -0.71
USP38-201ENST00000307017 PRB2P02812 416 aaPredicted RBP10.62□□□□□ -0.71
USP38-201ENST00000307017 ZXDCQ2QGD7 858 aaPredicted RBP10.62□□□□□ -0.71
USP38-201ENST00000307017 NYNRINQ9P2P1 1898 aaKnown RBP10.62□□□□□ -0.71
USP38-201ENST00000307017 FSTP19883 344 aa10.62□□□□□ -0.71
USP38-201ENST00000307017 CNTFRP26992 372 aa10.62□□□□□ -0.71
USP38-201ENST00000307017 NDPQ00604 133 aa10.62□□□□□ -0.71
USP38-201ENST00000307017 TIMM23BQ5SRD1 257 aa10.62□□□□□ -0.71
USP38-201ENST00000307017 OR5P3Q8WZ94 311 aa10.62□□□□□ -0.71
USP38-201ENST00000307017 RPL15P61313 204 aaKnown RBP10.62□□□□□ -0.71
USP38-201ENST00000307017 NRN1LQ496H8 165 aa10.62□□□□□ -0.71
USP38-201ENST00000307017 STPG1Q5TH74 334 aa10.62□□□□□ -0.71
USP38-201ENST00000307017 TMEM219Q86XT9 240 aa10.62□□□□□ -0.71
USP38-201ENST00000307017 FER1L6-AS1Q8NA97 138 aa10.62□□□□□ -0.71
USP38-201ENST00000307017 ZNF585BQ52M93 769 aa10.62□□□□□ -0.71
USP38-201ENST00000307017 LCN12Q6JVE5 192 aa10.62□□□□□ -0.71
USP38-201ENST00000307017 OR52E5Q8NH55 327 aa10.62□□□□□ -0.71
USP38-201ENST00000307017 RPUSD1Q9UJJ7 312 aaKnown RBP10.62□□□□□ -0.71
USP38-201ENST00000307017 ZNF146Q15072 292 aa10.62□□□□□ -0.71
USP38-201ENST00000307017 PILRAQ9UKJ1 303 aa10.62□□□□□ -0.71
USP38-201ENST00000307017 QSER1Q2KHR3 1735 aa10.62□□□□□ -0.71
USP38-201ENST00000307017 HGFACQ04756 655 aa10.62□□□□□ -0.71
USP38-201ENST00000307017 SMIM8Q96KF7 97 aa10.62□□□□□ -0.71
USP38-201ENST00000307017 NPDC1Q9NQX5 325 aaPredicted RBP10.62□□□□□ -0.71
USP38-201ENST00000307017 C12orf77C9JDV5 145 aa10.61□□□□□ -0.71
USP38-201ENST00000307017 ASCL4Q6XD76 172 aa10.61□□□□□ -0.71
USP38-201ENST00000307017 LAMTOR2Q9Y2Q5 125 aa10.61□□□□□ -0.71
USP38-201ENST00000307017 UMODP07911 640 aa10.61□□□□□ -0.71
USP38-201ENST00000307017 HAPLN4Q86UW8 402 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms