RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 NCOR1P1Q9H4R4 102 aa11.44□□□□□ -0.58
TRIM56-201ENST00000306085 LDLRAD1Q5T700 205 aa11.44□□□□□ -0.58
TRIM56-201ENST00000306085 CYP2G1PQ6ZSU1 146 aa11.44□□□□□ -0.58
TRIM56-201ENST00000306085 ZNF236Q9UL36 1845 aa11.44□□□□□ -0.58
TRIM56-201ENST00000306085 PPIAL4CA0A0B4J2A2 164 aa11.44□□□□□ -0.58
TRIM56-201ENST00000306085 PPIAL4GP0DN37 164 aa11.44□□□□□ -0.58
TRIM56-201ENST00000306085 MYEOVQ96EZ4 313 aa11.44□□□□□ -0.58
TRIM56-201ENST00000306085 RREB1Q92766 1687 aa11.44□□□□□ -0.58
TRIM56-201ENST00000306085 ANAPC10Q9UM13 185 aa11.44□□□□□ -0.58
TRIM56-201ENST00000306085 TRGV4A0A0C4DH28 118 aa11.44□□□□□ -0.58
TRIM56-201ENST00000306085 NRN1Q9NPD7 142 aa11.44□□□□□ -0.58
TRIM56-201ENST00000306085 ODAMA1E959 279 aa11.44□□□□□ -0.58
TRIM56-201ENST00000306085 ADARB2-AS1A8MUL3 147 aa11.44□□□□□ -0.58
TRIM56-201ENST00000306085 DDX60LQ5H9U9 1706 aaKnown RBP11.44□□□□□ -0.58
TRIM56-201ENST00000306085 LIFP15018 202 aa11.43□□□□□ -0.58
TRIM56-201ENST00000306085 ZFP36L2P47974 494 aaKnown RBP11.43□□□□□ -0.58
TRIM56-201ENST00000306085 UCP2P55851 309 aa11.43□□□□□ -0.58
TRIM56-201ENST00000306085 RSPO2Q6UXX9 243 aaPredicted RBP11.43□□□□□ -0.58
TRIM56-201ENST00000306085 STHQ8IWL8 128 aa11.43□□□□□ -0.58
TRIM56-201ENST00000306085 HRKO00198 91 aa11.43□□□□□ -0.58
TRIM56-201ENST00000306085 MORN3Q6PF18 240 aaPredicted RBP11.43□□□□□ -0.58
TRIM56-201ENST00000306085 LINC01555Q8NAE3 123 aa11.43□□□□□ -0.58
TRIM56-201ENST00000306085 C2orf68Q2NKX9 166 aa11.43□□□□□ -0.58
TRIM56-201ENST00000306085 SERF1AO75920 110 aa11.43□□□□□ -0.58
TRIM56-201ENST00000306085 WDYHV1Q96HA8 205 aa11.43□□□□□ -0.58
TRIM56-201ENST00000306085 SRSF1Q07955 248 aaKnown RBP eCLIP11.43□□□□□ -0.58
TRIM56-201ENST00000306085 CHCHD5Q9BSY4 110 aa11.43□□□□□ -0.58
TRIM56-201ENST00000306085 TRPM7Q96QT4 1865 aa11.43□□□□□ -0.58
TRIM56-201ENST00000306085 CD33P20138 364 aa11.43□□□□□ -0.58
TRIM56-201ENST00000306085 IGKCP01834 107 aa11.43□□□□□ -0.58
TRIM56-201ENST00000306085 DTX2Q86UW9 622 aa11.43□□□□□ -0.58
TRIM56-201ENST00000306085 C1orf210Q8IVY1 113 aa11.43□□□□□ -0.58
TRIM56-201ENST00000306085 A0A1W2PRS3 328 aa11.42□□□□□ -0.58
TRIM56-201ENST00000306085 IGLV3-27P01718 113 aa11.42□□□□□ -0.58
TRIM56-201ENST00000306085 IL11P20809 199 aa11.42□□□□□ -0.58
TRIM56-201ENST00000306085 Q6ZNB5 142 aa11.42□□□□□ -0.58
TRIM56-201ENST00000306085 NAA38Q9BRA0 125 aaKnown RBP11.42□□□□□ -0.58
TRIM56-201ENST00000306085 TCF19Q9Y242 345 aa11.42□□□□□ -0.58
TRIM56-201ENST00000306085 MYO18BQ8IUG5 2567 aa11.42□□□□□ -0.58
TRIM56-201ENST00000306085 PSCAO43653 123 aa11.42□□□□□ -0.58
TRIM56-201ENST00000306085 CD5LO43866 347 aa11.42□□□□□ -0.58
TRIM56-201ENST00000306085 SPINK8P0C7L1 97 aa11.42□□□□□ -0.58
TRIM56-201ENST00000306085 C1orf162Q8NEQ5 155 aaPredicted RBP11.42□□□□□ -0.58
TRIM56-201ENST00000306085 SEC11AP67812 179 aa11.42□□□□□ -0.58
TRIM56-201ENST00000306085 HMGCLL1Q8TB92 370 aa11.42□□□□□ -0.58
TRIM56-201ENST00000306085 GPR132Q9UNW8 380 aa11.42□□□□□ -0.58
TRIM56-201ENST00000306085 SIRT4Q9Y6E7 314 aaPredicted RBP11.42□□□□□ -0.58
TRIM56-201ENST00000306085 KCNE1BA0A087WTH5 132 aa11.42□□□□□ -0.58
TRIM56-201ENST00000306085 TRAV41A0A0B4J266 112 aa11.42□□□□□ -0.58
TRIM56-201ENST00000306085 TPTE2P1Q5T6R2 138 aa11.42□□□□□ -0.58
TRIM56-201ENST00000306085 SERGEFQ9UGK8 458 aa11.42□□□□□ -0.58
TRIM56-201ENST00000306085 NBEAP1P0C6P0 100 aa11.42□□□□□ -0.58
TRIM56-201ENST00000306085 C5orf47Q569G3 176 aa11.42□□□□□ -0.58
TRIM56-201ENST00000306085 KLHDC2Q9Y2U9 406 aa11.42□□□□□ -0.58
TRIM56-201ENST00000306085 NCOA6Q14686 2063 aaPredicted RBP11.41□□□□□ -0.58
TRIM56-201ENST00000306085 IZUMO1RA6ND01 250 aa11.41□□□□□ -0.58
TRIM56-201ENST00000306085 TMEM238C9JI98 176 aa11.41□□□□□ -0.58
TRIM56-201ENST00000306085 FAM90A26D6RGX4 464 aa11.41□□□□□ -0.58
TRIM56-201ENST00000306085 GPBAR1Q8TDU6 330 aa11.41□□□□□ -0.58
TRIM56-201ENST00000306085 VENTXO95231 258 aa11.41□□□□□ -0.58
TRIM56-201ENST00000306085 MSRB3Q8IXL7 192 aa11.41□□□□□ -0.58
TRIM56-201ENST00000306085 GDF15Q99988 308 aa11.41□□□□□ -0.58
TRIM56-201ENST00000306085 NRAPQ86VF7 1730 aa11.41□□□□□ -0.58
TRIM56-201ENST00000306085 C1orf174Q8IYL3 243 aa11.41□□□□□ -0.58
TRIM56-201ENST00000306085 CIARTQ8N365 385 aaPredicted RBP11.41□□□□□ -0.58
TRIM56-201ENST00000306085 Q9H3A6 140 aa11.41□□□□□ -0.58
TRIM56-201ENST00000306085 ZNF385AQ96PM9 386 aaKnown RBP11.41□□□□□ -0.58
TRIM56-201ENST00000306085 PLCH1Q4KWH8 1693 aa11.41□□□□□ -0.58
TRIM56-201ENST00000306085 NDUFAF3Q9BU61 184 aa11.41□□□□□ -0.58
TRIM56-201ENST00000306085 FBXL15Q9H469 300 aa11.41□□□□□ -0.58
TRIM56-201ENST00000306085 A0A0G2JLM5 398 aa11.4□□□□□ -0.58
TRIM56-201ENST00000306085 LOC285556D6RIA3 1793 aa11.4□□□□□ -0.58
TRIM56-201ENST00000306085 TRAV8-3A0A0A6YYJ7 113 aa11.4□□□□□ -0.58
TRIM56-201ENST00000306085 TM4SF4P48230 202 aa11.4□□□□□ -0.58
TRIM56-201ENST00000306085 KLF12Q9Y4X4 402 aa11.4□□□□□ -0.58
TRIM56-201ENST00000306085 TTTY12Q9BZ98 90 aa11.4□□□□□ -0.58
TRIM56-201ENST00000306085 EGR4Q05215 589 aa11.4□□□□□ -0.58
TRIM56-201ENST00000306085 CD300EQ496F6 205 aaPredicted RBP11.4□□□□□ -0.58
TRIM56-201ENST00000306085 Q6AWC8 147 aa11.4□□□□□ -0.58
TRIM56-201ENST00000306085 TMEM186Q96B77 213 aa11.4□□□□□ -0.58
TRIM56-201ENST00000306085 SMIM8Q96KF7 97 aa11.4□□□□□ -0.58
TRIM56-201ENST00000306085 RNASE7Q9H1E1 156 aaKnown RBP11.4□□□□□ -0.58
TRIM56-201ENST00000306085 ALS2Q96Q42 1657 aa11.4□□□□□ -0.58
TRIM56-201ENST00000306085 UPK3AO75631 287 aa11.4□□□□□ -0.58
TRIM56-201ENST00000306085 DLX4Q92988 240 aaPredicted RBP11.4□□□□□ -0.58
TRIM56-201ENST00000306085 RCC1LQ96I51 464 aaKnown RBP11.4□□□□□ -0.58
TRIM56-201ENST00000306085 C5orf66Q9H5L9 145 aa11.4□□□□□ -0.58
TRIM56-201ENST00000306085 LEPROTO15243 131 aa11.4□□□□□ -0.59
TRIM56-201ENST00000306085 ERVK11-1P61568 191 aa11.4□□□□□ -0.59
TRIM56-201ENST00000306085 TFF3Q07654 80 aa11.4□□□□□ -0.59
TRIM56-201ENST00000306085 TMEM240Q5SV17 173 aa11.4□□□□□ -0.59
TRIM56-201ENST00000306085 REPIN1Q9BWE0 567 aaKnown RBP11.4□□□□□ -0.59
TRIM56-201ENST00000306085 DRD3P35462 400 aa11.4□□□□□ -0.59
TRIM56-201ENST00000306085 PLXNA1Q9UIW2 1896 aa11.4□□□□□ -0.59
TRIM56-201ENST00000306085 RFLNBQ8N5W9 214 aa11.39□□□□□ -0.59
TRIM56-201ENST00000306085 TMEM167AQ8TBQ9 72 aa11.39□□□□□ -0.59
TRIM56-201ENST00000306085 CTGFP29279 349 aa11.39□□□□□ -0.59
TRIM56-201ENST00000306085 RPL39P5Q59GN2 51 aa11.39□□□□□ -0.59
TRIM56-201ENST00000306085 CLEC19AQ6UXS0 136 aa11.39□□□□□ -0.59
TRIM56-201ENST00000306085 ZNF114Q8NC26 417 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms