RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 PRAMEF6Q5VXH4 476 aa6.39□□□□□ -1.39
TM4SF1-201ENST00000305366 RBMS3Q6XE24 437 aaKnown RBP6.39□□□□□ -1.39
TM4SF1-201ENST00000305366 SSX7Q7RTT5 188 aa6.39□□□□□ -1.39
TM4SF1-201ENST00000305366 OR10P1Q8NGE3 313 aa6.39□□□□□ -1.39
TM4SF1-201ENST00000305366 MRGPRDQ8TDS7 321 aa6.39□□□□□ -1.39
TM4SF1-201ENST00000305366 EDARADDQ8WWZ3 215 aa6.39□□□□□ -1.39
TM4SF1-201ENST00000305366 TIMD4Q96H15 378 aa6.39□□□□□ -1.39
TM4SF1-201ENST00000305366 CTDSP1Q9GZU7 261 aa6.39□□□□□ -1.39
TM4SF1-201ENST00000305366 MSL2Q9HCI7 577 aa6.39□□□□□ -1.39
TM4SF1-201ENST00000305366 ARFGEF3Q5TH69 2177 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 IGHV3-64DA0A0J9YX35 117 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 CTXND1A0A1B0GTU2 59 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 C17orf98A8MV24 154 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 SRRM5B3KS81 715 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 TMEM250H0YL14 139 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 CLDN34H7C241 214 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 SPINT2O43291 252 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 SOX15O60248 233 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 ZNF737O75373 536 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 SCGB2A1O75556 95 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 KRASP01116 189 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 IGHV1-46P01743 117 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 CXCL1P09341 107 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 STAG3L2P0CL84 134 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 EGR1P18146 543 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 MRPS11P82912 194 aaKnown RBP6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 ZNF816Q0VGE8 651 aaPredicted RBP6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 TMEM177Q53S58 311 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 H2BFWTQ7Z2G1 175 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 RPP25LQ8N5L8 163 aaKnown RBP6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 OR13A1Q8NGR1 328 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 NANPQ8TBE9 248 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 DTD1Q8TEA8 209 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 LHX4Q969G2 390 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 TMPRSS5Q9H3S3 457 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 SLC39A9Q9NUM3 307 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 JPT1Q9UK76 154 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 ANK2Q01484 3957 aa6.38□□□□□ -1.39
TM4SF1-201ENST00000305366 IGLV3-9A0A075B6K5 115 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 TRBV24-1A0A075B6N3 115 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 ITGB1BP1O14713 200 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 WIPF1O43516 503 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 YPEL1O60688 119 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 IGKV1D-33P01593 117 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 IGKV1-33P01594 117 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 NQO2P16083 231 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 GZMHP20718 246 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 FGF7P21781 194 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 ZFP36P26651 326 aaKnown RBP6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 PRDX2P32119 198 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 SSTR5P35346 364 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 CDX1P47902 265 aaPredicted RBP6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 HILS1P60008 231 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 SPCS3P61009 180 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 KIAA0141Q14154 515 aaPredicted RBP6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 PDLIM3Q53GG5 364 aaPredicted RBP6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 LCE2AQ5TA79 106 aaPredicted RBP6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 WDR25Q64LD2 544 aaPredicted RBP6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 OR8G2PQ6IF36 304 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 ACSM6Q6P461 480 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 CYP2G1PQ6ZSU1 146 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 C1orf87Q8N0U7 546 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 CD177Q8N6Q3 437 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 NHLRC2Q8NBF2 726 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 SNX22Q96L94 193 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 YPEL2Q96QA6 119 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 DIRC2Q96SL1 478 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 ESM1Q9NQ30 184 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 MANBALQ9NQG1 85 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 CLN8Q9UBY8 286 aa6.37□□□□□ -1.39
TM4SF1-201ENST00000305366 IGHV3OR16-10A0A075B7F0 116 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 LINC00473A8K010 186 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 CEBPZOSA8MTT3 80 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 C17orf112F2Z3M2 114 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 MGST3O14880 152 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 RBFOX2O43251 390 aaKnown RBP eCLIP6.36□□□□□ -1.391e-12■□□□□ 10.5
TM4SF1-201ENST00000305366 HPRT1P00492 218 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 IGHV3-13P01766 116 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 CD55P08174 381 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 FGF8P55075 233 aaPredicted RBP6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 ELLP55199 621 aaPredicted RBP6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 CD81P60033 236 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 TNFAIP6P98066 277 aaPredicted RBP6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 MEF2BQ02080 365 aaPredicted RBP6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 OR2B11Q5JQS5 317 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 FAM53AQ6NSI3 398 aaPredicted RBP6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 ZNF343Q6P1L6 599 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 SIGLECL1Q8N7X8 197 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 OR52E5Q8NH55 327 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 ZNF596Q8TC21 504 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 LRRC29Q8WV35 223 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 JMJD8Q96S16 334 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 ACTR3CQ9C0K3 210 aaPredicted RBP6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 OR51M1Q9H341 326 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 UFSP2Q9NUQ7 469 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 NAT8Q9UHE5 227 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 PSG11Q9UQ72 335 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 TGIF2-C20orf24A0A0A6YYL0 155 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 TMEM89A2RUT3 159 aa6.36□□□□□ -1.39
TM4SF1-201ENST00000305366 MARCH11A6NNE9 402 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms