RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ACOT6Q3I5F7 207 aaPredicted RBP11.69□□□□□ -0.54
SHCBP1-201ENST00000303383 OR10G4Q8NGN3 311 aa11.69□□□□□ -0.54
SHCBP1-201ENST00000303383 OR10G9Q8NGN4 311 aa11.69□□□□□ -0.54
SHCBP1-201ENST00000303383 OR10G7Q8NGN6 311 aa11.69□□□□□ -0.54
SHCBP1-201ENST00000303383 TPSG1Q9NRR2 321 aa11.69□□□□□ -0.54
SHCBP1-201ENST00000303383 CNTFRP26992 372 aa11.69□□□□□ -0.54
SHCBP1-201ENST00000303383 RPL27AP46776 148 aaKnown RBP11.69□□□□□ -0.54
SHCBP1-201ENST00000303383 LMO4P61968 165 aa11.69□□□□□ -0.54
SHCBP1-201ENST00000303383 PSG5Q15238 335 aa11.69□□□□□ -0.54
SHCBP1-201ENST00000303383 SVBPQ8N300 66 aa11.69□□□□□ -0.54
SHCBP1-201ENST00000303383 KCNIP2Q9NS61 270 aa11.69□□□□□ -0.54
SHCBP1-201ENST00000303383 TEPPQ6URK8 271 aa11.69□□□□□ -0.54
SHCBP1-201ENST00000303383 RCC1LQ96I51 464 aaKnown RBP11.69□□□□□ -0.54
SHCBP1-201ENST00000303383 ACTR3CQ9C0K3 210 aaPredicted RBP11.69□□□□□ -0.54
SHCBP1-201ENST00000303383 FBXL15Q9H469 300 aa11.69□□□□□ -0.54
SHCBP1-201ENST00000303383 A0A1W2PPI3 338 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 MAP1LC3B2A6NCE7 125 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 CYB5BO43169 146 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 CNIH1O95406 144 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 CEBPGP53567 150 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 FGF8P55075 233 aaPredicted RBP11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 TREML4Q6UXN2 200 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 MAP1LC3BQ9GZQ8 125 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 SLC25A22Q9H936 323 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 PLXNB1O43157 2135 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 IGKV1D-33P01593 117 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 IGKV1-33P01594 117 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 PRSS8Q16651 343 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 C2orf83Q53S99 150 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 PPP1R27Q86WC6 154 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 TMEM170AQ8WVE7 144 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 GNG13Q9P2W3 67 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 SIGLEC9Q9Y336 463 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 A0A1W2PPV4 95 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 RBFOX3A6NFN3 312 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 LY6LH3BQJ8 138 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 NDUFS8O00217 210 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 CCL20P78556 96 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 ACSM6Q6P461 480 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 RNF5Q99942 180 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 SEC11CQ9BY50 192 aa11.68□□□□□ -0.54
SHCBP1-201ENST00000303383 CD5P06127 495 aa11.67□□□□□ -0.54
SHCBP1-201ENST00000303383 HOXB4P17483 251 aaPredicted RBP11.67□□□□□ -0.54
SHCBP1-201ENST00000303383 ABHD5Q8WTS1 349 aa11.67□□□□□ -0.54
SHCBP1-201ENST00000303383 SLC35E1Q96K37 410 aa11.67□□□□□ -0.54
SHCBP1-201ENST00000303383 ZFP92A6NM28 416 aa11.67□□□□□ -0.54
SHCBP1-201ENST00000303383 HMGB3O15347 200 aaKnown RBP11.67□□□□□ -0.54
SHCBP1-201ENST00000303383 VENTXO95231 258 aa11.67□□□□□ -0.54
SHCBP1-201ENST00000303383 IFNA1P01562 189 aa11.67□□□□□ -0.54
SHCBP1-201ENST00000303383 PAX6P26367 422 aa11.67□□□□□ -0.54
SHCBP1-201ENST00000303383 SPSB3Q6PJ21 355 aa11.67□□□□□ -0.54
SHCBP1-201ENST00000303383 CENPVQ7Z7K6 275 aaPredicted RBP11.67□□□□□ -0.54
SHCBP1-201ENST00000303383 ODF3BA8MYP8 253 aa11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 SOX15O60248 233 aa11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 APELAP0DMC3 54 aa11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 RNASE2P10153 161 aaKnown RBP11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 CD24P25063 80 aa11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 MINOS1Q5TGZ0 78 aa11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 CYB5R2Q6BCY4 276 aa11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 SSMEM1Q8WWF3 244 aa11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 UNKLQ9H9P5 680 aaKnown RBP11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 MINOS1-NBL1R4GNA1 71 aa11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 MOSP00540 346 aa11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 REG1AP05451 166 aa11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 MAS1LP35410 378 aa11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 OPRK1P41145 380 aa11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 C10orf105Q8TEF2 133 aa11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 SIRPDQ9H106 197 aa11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 CTXND1A0A1B0GTU2 59 aa11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 ARSJQ5FYB0 599 aaPredicted RBP11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 RARRES2Q99969 163 aa11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 PXMP4Q9Y6I8 212 aa11.66□□□□□ -0.54
SHCBP1-201ENST00000303383 E7EUB6 86 aa11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 EIF3GO75821 320 aaKnown RBP eCLIP11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 FABP1P07148 127 aa11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 SNRNP70P08621 437 aaKnown RBP11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 G0S2P27469 103 aa11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 AKIRIN2Q53H80 203 aa11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 HCP5Q6MZN7 132 aa11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 RPP25LQ8N5L8 163 aaKnown RBP11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 OR2T10Q8NGZ9 312 aa11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 RXFP4Q8TDU9 374 aa11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 ACY3Q96HD9 319 aa11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 TACC2O95359 2948 aa11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 NCBP2LA6PVI3 153 aaKnown RBP11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 OOSP1A8MZH6 123 aa11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 PRSS46E5RG02 174 aa11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 CDC34P49427 236 aaPredicted RBP11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 BTN1A1Q13410 526 aa11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 LDLRAD2Q5SZI1 272 aa11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 MIC13Q5XKP0 118 aa11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 NRGNQ92686 78 aa11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 SLC35B3Q9H1N7 401 aa11.65□□□□□ -0.54
SHCBP1-201ENST00000303383 NBR2O15453 112 aa11.65□□□□□ -0.55
SHCBP1-201ENST00000303383 WT1-ASQ06250 92 aa11.65□□□□□ -0.55
SHCBP1-201ENST00000303383 MBD3L1Q8WWY6 194 aa11.65□□□□□ -0.55
SHCBP1-201ENST00000303383 MGST2Q99735 147 aa11.65□□□□□ -0.55
SHCBP1-201ENST00000303383 NKX6-2Q9C056 277 aaPredicted RBP11.65□□□□□ -0.55
SHCBP1-201ENST00000303383 TRAV1-1A0A0B4J248 108 aa11.64□□□□□ -0.55
SHCBP1-201ENST00000303383 IGHV4-61A0A0C4DH41 118 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms