RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 A0A0J9YW62 118 aa12.09□□□□□ -0.47
HIPK3-201ENST00000303296 DPM2O94777 84 aa12.09□□□□□ -0.47
HIPK3-201ENST00000303296 C6orf226Q5I0X4 101 aa12.09□□□□□ -0.47
HIPK3-201ENST00000303296 MDS2Q8NDY4 140 aa12.09□□□□□ -0.47
HIPK3-201ENST00000303296 TRAV41A0A0B4J266 112 aa12.08□□□□□ -0.48
HIPK3-201ENST00000303296 TMEM8BA6NDV4 472 aa12.08□□□□□ -0.48
HIPK3-201ENST00000303296 HMGCLL1Q8TB92 370 aa12.08□□□□□ -0.48
HIPK3-201ENST00000303296 KLHDC2Q9Y2U9 406 aa12.08□□□□□ -0.48
HIPK3-201ENST00000303296 ZGRF1Q86YA3 2104 aa12.08□□□□□ -0.48
HIPK3-201ENST00000303296 IGFBP2P18065 325 aa12.08□□□□□ -0.48
HIPK3-201ENST00000303296 C9orf40Q8IXQ3 194 aa12.08□□□□□ -0.48
HIPK3-201ENST00000303296 C21orf62Q9NYP8 219 aa12.08□□□□□ -0.48
HIPK3-201ENST00000303296 METRNQ9UJH8 293 aa12.08□□□□□ -0.48
HIPK3-201ENST00000303296 FMC1Q96HJ9 113 aa12.08□□□□□ -0.48
HIPK3-201ENST00000303296 KLF12Q9Y4X4 402 aa12.08□□□□□ -0.48
HIPK3-201ENST00000303296 SCN5AQ14524 2016 aa12.08□□□□□ -0.48
HIPK3-201ENST00000303296 TRAV8-3A0A0A6YYJ7 113 aa12.08□□□□□ -0.48
HIPK3-201ENST00000303296 CXCL2P19875 107 aa12.08□□□□□ -0.48
HIPK3-201ENST00000303296 A0A1W2PQD3 144 aa12.08□□□□□ -0.48
HIPK3-201ENST00000303296 HOXD4P09016 255 aaPredicted RBP12.08□□□□□ -0.48
HIPK3-201ENST00000303296 RPP21Q9H633 154 aaKnown RBP12.08□□□□□ -0.48
HIPK3-201ENST00000303296 GP6Q9HCN6 339 aa12.08□□□□□ -0.48
HIPK3-201ENST00000303296 PTP4A3O75365 173 aa12.08□□□□□ -0.48
HIPK3-201ENST00000303296 SRSF1Q07955 248 aaKnown RBP eCLIP12.08□□□□□ -0.48
HIPK3-201ENST00000303296 GNG5P63218 68 aa12.07□□□□□ -0.48
HIPK3-201ENST00000303296 SMDT1Q9H4I9 107 aa12.07□□□□□ -0.48
HIPK3-201ENST00000303296 SSC5DA1L4H1 1573 aa12.07□□□□□ -0.48
HIPK3-201ENST00000303296 hADV29S1A0JD25 119 aa12.07□□□□□ -0.48
HIPK3-201ENST00000303296 TCRAP04437 139 aa12.07□□□□□ -0.48
HIPK3-201ENST00000303296 APOBEC3AP31941 199 aaPredicted RBP12.07□□□□□ -0.48
HIPK3-201ENST00000303296 CRYBA2P53672 197 aa12.07□□□□□ -0.48
HIPK3-201ENST00000303296 TRAV5A0A0B4J249 113 aa12.07□□□□□ -0.48
HIPK3-201ENST00000303296 HIST1H2BAQ96A08 127 aa12.07□□□□□ -0.48
HIPK3-201ENST00000303296 MSGN1A6NI15 193 aa12.06□□□□□ -0.48
HIPK3-201ENST00000303296 FAM201AQ5SY85 155 aa12.06□□□□□ -0.48
HIPK3-201ENST00000303296 ZAR1Q86SH2 424 aa12.06□□□□□ -0.48
HIPK3-201ENST00000303296 TMEM91Q6ZNR0 172 aa12.06□□□□□ -0.48
HIPK3-201ENST00000303296 ALPK2Q86TB3 2170 aa12.06□□□□□ -0.48
HIPK3-201ENST00000303296 MYOD1P15172 320 aa12.06□□□□□ -0.48
HIPK3-201ENST00000303296 OR52E5Q8NH55 327 aa12.06□□□□□ -0.48
HIPK3-201ENST00000303296 MGST2Q99735 147 aa12.06□□□□□ -0.48
HIPK3-201ENST00000303296 TRGV1A0A0A0MS02 117 aa12.06□□□□□ -0.48
HIPK3-201ENST00000303296 CDKN1AP38936 164 aa12.06□□□□□ -0.48
HIPK3-201ENST00000303296 GATA2P23769 480 aaPredicted RBP12.06□□□□□ -0.48
HIPK3-201ENST00000303296 GPX4P36969 197 aaPredicted RBP12.05□□□□□ -0.48
HIPK3-201ENST00000303296 TIMM23BQ5SRD1 257 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 C2orf82Q6UX34 121 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 IL36BQ9NZH7 164 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 B9A039 149 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 PSMG4Q5JS54 123 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 ZNF474Q6S9Z5 364 aaPredicted RBP12.05□□□□□ -0.48
HIPK3-201ENST00000303296 C1QL2Q7Z5L3 287 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 RCHY1Q96PM5 261 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 TRAV14DV4A0A0A6YYC5 116 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 VN1R4Q7Z5H5 301 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 C19orf24Q9BVV8 132 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 V9GYH0 126 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 TCTEX1D4Q5JR98 221 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 PRSS22Q9GZN4 317 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 LINC00527Q9UJ94 153 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 ZNF345Q14585 488 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 GAGE13Q4V321 117 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 GTSF1LQ9H1H1 148 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 PIK3C2AO00443 1686 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 TFF3Q07654 80 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 DLX4Q92988 240 aaPredicted RBP12.05□□□□□ -0.48
HIPK3-201ENST00000303296 UBE2E2Q96LR5 201 aa12.05□□□□□ -0.48
HIPK3-201ENST00000303296 NAA38Q9BRA0 125 aaKnown RBP12.05□□□□□ -0.48
HIPK3-201ENST00000303296 RNASE7Q9H1E1 156 aaKnown RBP12.05□□□□□ -0.48
HIPK3-201ENST00000303296 POLR2AP24928 1970 aaKnown RBP12.04□□□□□ -0.48
HIPK3-201ENST00000303296 IGHV1-45A0A0A0MS14 117 aa12.04□□□□□ -0.48
HIPK3-201ENST00000303296 EFEMP2O95967 443 aa12.04□□□□□ -0.48
HIPK3-201ENST00000303296 IGKCP01834 107 aa12.04□□□□□ -0.48
HIPK3-201ENST00000303296 CRIM1Q9NZV1 1036 aa12.04□□□□□ -0.48
HIPK3-201ENST00000303296 SHPRHQ149N8 1683 aa12.04□□□□□ -0.48
HIPK3-201ENST00000303296 TRAV12-1A0A0B4J245 112 aa12.04□□□□□ -0.48
HIPK3-201ENST00000303296 JPT1Q9UK76 154 aa12.04□□□□□ -0.48
HIPK3-201ENST00000303296 MED12Q93074 2177 aa12.04□□□□□ -0.48
HIPK3-201ENST00000303296 SAMD5Q5TGI4 173 aa12.04□□□□□ -0.48
HIPK3-201ENST00000303296 SCRT1Q9BWW7 348 aa12.04□□□□□ -0.48
HIPK3-201ENST00000303296 ANKRD36A6QL64 1941 aa12.04□□□□□ -0.48
HIPK3-201ENST00000303296 THAP8Q8NA92 274 aa12.04□□□□□ -0.48
HIPK3-201ENST00000303296 DPM3Q9P2X0 92 aa12.04□□□□□ -0.48
HIPK3-201ENST00000303296 CDCP2Q5VXM1 449 aa12.04□□□□□ -0.48
HIPK3-201ENST00000303296 EREGO14944 169 aa12.03□□□□□ -0.48
HIPK3-201ENST00000303296 ISXQ2M1V0 245 aa12.03□□□□□ -0.48
HIPK3-201ENST00000303296 GDF15Q99988 308 aa12.03□□□□□ -0.48
HIPK3-201ENST00000303296 TOGARAM1Q9Y4F4 1720 aa12.03□□□□□ -0.48
HIPK3-201ENST00000303296 ZNF729A6NN14 1252 aaPredicted RBP12.03□□□□□ -0.48
HIPK3-201ENST00000303296 SSBP2P81877 361 aaPredicted RBP12.03□□□□□ -0.48
HIPK3-201ENST00000303296 FOXL1Q12952 345 aa12.03□□□□□ -0.48
HIPK3-201ENST00000303296 CRYGNQ8WXF5 182 aa12.03□□□□□ -0.48
HIPK3-201ENST00000303296 NPIPB13A6NJU9 1138 aa12.03□□□□□ -0.48
HIPK3-201ENST00000303296 NPIPB5A8MRT5 1133 aa12.03□□□□□ -0.48
HIPK3-201ENST00000303296 C1QTNF12Q5T7M4 302 aa12.03□□□□□ -0.48
HIPK3-201ENST00000303296 MIXL1Q9H2W2 232 aa12.03□□□□□ -0.48
HIPK3-201ENST00000303296 TMEM30AQ9NV96 361 aa12.03□□□□□ -0.48
HIPK3-201ENST00000303296 LEPROTO15243 131 aa12.03□□□□□ -0.48
HIPK3-201ENST00000303296 NR2C2APQ86WQ0 139 aa12.03□□□□□ -0.48
HIPK3-201ENST00000303296 FABP5P3A8MUU1 101 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms