RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 PPT1P50897 306 aa17.84■□□□□ 0.45
SMAD1-201ENST00000302085 HAGHQ16775 308 aa17.84■□□□□ 0.45
SMAD1-201ENST00000302085 MINOS1Q5TGZ0 78 aa17.84■□□□□ 0.45
SMAD1-201ENST00000302085 ZNF787Q6DD87 383 aa17.84■□□□□ 0.45
SMAD1-201ENST00000302085 PPP1R27Q86WC6 154 aa17.84■□□□□ 0.45
SMAD1-201ENST00000302085 GGTLC1Q9BX51 225 aa17.84■□□□□ 0.45
SMAD1-201ENST00000302085 LPAR2Q9HBW0 351 aa17.84■□□□□ 0.45
SMAD1-201ENST00000302085 SLC39A9Q9NUM3 307 aa17.84■□□□□ 0.45
SMAD1-201ENST00000302085 MINOS1-NBL1R4GNA1 71 aa17.84■□□□□ 0.45
SMAD1-201ENST00000302085 NDUFS8O00217 210 aa17.84■□□□□ 0.45
SMAD1-201ENST00000302085 CD24P25063 80 aa17.84■□□□□ 0.45
SMAD1-201ENST00000302085 WNK2Q9Y3S1 2297 aa17.84■□□□□ 0.45
SMAD1-201ENST00000302085 UBR5O95071 2799 aaPredicted RBP17.84■□□□□ 0.45
SMAD1-201ENST00000302085 TACC2O95359 2948 aa17.83■□□□□ 0.45
SMAD1-201ENST00000302085 MAP1LC3B2A6NCE7 125 aa17.83■□□□□ 0.44
SMAD1-201ENST00000302085 FCN1O00602 326 aa17.83■□□□□ 0.44
SMAD1-201ENST00000302085 YIF1AO95070 293 aa17.83■□□□□ 0.44
SMAD1-201ENST00000302085 M6PRP20645 277 aa17.83■□□□□ 0.44
SMAD1-201ENST00000302085 RPL27AP46776 148 aaKnown RBP17.83■□□□□ 0.44
SMAD1-201ENST00000302085 COMPP49747 757 aaPredicted RBP17.83■□□□□ 0.44
SMAD1-201ENST00000302085 FBLN7Q53RD9 439 aa17.83■□□□□ 0.44
SMAD1-201ENST00000302085 TEPPQ6URK8 271 aa17.83■□□□□ 0.44
SMAD1-201ENST00000302085 CLEC2AQ6UVW9 174 aa17.83■□□□□ 0.44
SMAD1-201ENST00000302085 P2RX4Q99571 388 aa17.83■□□□□ 0.44
SMAD1-201ENST00000302085 MAP1LC3BQ9GZQ8 125 aa17.83■□□□□ 0.44
SMAD1-201ENST00000302085 IGLC7A0M8Q6 106 aa17.82■□□□□ 0.44
SMAD1-201ENST00000302085 MOSP00540 346 aa17.82■□□□□ 0.44
SMAD1-201ENST00000302085 LGALS4P56470 323 aa17.82■□□□□ 0.44
SMAD1-201ENST00000302085 ACOT6Q3I5F7 207 aaPredicted RBP17.82■□□□□ 0.44
SMAD1-201ENST00000302085 GCSAMLQ5JQS6 135 aa17.82■□□□□ 0.44
SMAD1-201ENST00000302085 MIC13Q5XKP0 118 aa17.82■□□□□ 0.44
SMAD1-201ENST00000302085 PERPQ96FX8 193 aa17.82■□□□□ 0.44
SMAD1-201ENST00000302085 OOSP1A8MZH6 123 aa17.82■□□□□ 0.44
SMAD1-201ENST00000302085 ACTL6BO94805 426 aa17.82■□□□□ 0.44
SMAD1-201ENST00000302085 UBE2E1P51965 193 aa17.82■□□□□ 0.44
SMAD1-201ENST00000302085 GNB1P62873 340 aa17.82■□□□□ 0.44
SMAD1-201ENST00000302085 SSBP2P81877 361 aaPredicted RBP17.82■□□□□ 0.44
SMAD1-201ENST00000302085 CD69Q07108 199 aa17.82■□□□□ 0.44
SMAD1-201ENST00000302085 GAMTQ14353 236 aa17.82■□□□□ 0.44
SMAD1-201ENST00000302085 ZNF506Q5JVG8 444 aa17.82■□□□□ 0.44
SMAD1-201ENST00000302085 FAM122CQ6P4D5 195 aa17.82■□□□□ 0.44
SMAD1-201ENST00000302085 EAF1Q96JC9 268 aaPredicted RBP17.82■□□□□ 0.44
SMAD1-201ENST00000302085 ACTR3CQ9C0K3 210 aaPredicted RBP17.82■□□□□ 0.44
SMAD1-201ENST00000302085 SLC25A22Q9H936 323 aa17.82■□□□□ 0.44
SMAD1-201ENST00000302085 IGHV4-30-2A0A087WSY4 118 aa17.81■□□□□ 0.44
SMAD1-201ENST00000302085 CTXND1A0A1B0GTU2 59 aa17.81■□□□□ 0.44
SMAD1-201ENST00000302085 REG1AP05451 166 aa17.81■□□□□ 0.44
SMAD1-201ENST00000302085 ICAM4Q14773 271 aa17.81■□□□□ 0.44
SMAD1-201ENST00000302085 SVBPQ8N300 66 aa17.81■□□□□ 0.44
SMAD1-201ENST00000302085 AJUBAQ96IF1 538 aa17.81■□□□□ 0.44
SMAD1-201ENST00000302085 SMDT1Q9H4I9 107 aa17.81■□□□□ 0.44
SMAD1-201ENST00000302085 PXMP4Q9Y6I8 212 aa17.81■□□□□ 0.44
SMAD1-201ENST00000302085 MMDQ15546 238 aa17.8■□□□□ 0.44
SMAD1-201ENST00000302085 CCDC144NLQ6NUI1 221 aa17.8■□□□□ 0.44
SMAD1-201ENST00000302085 TMEM144Q7Z5S9 345 aa17.8■□□□□ 0.44
SMAD1-201ENST00000302085 NPBQ8NG41 125 aa17.8■□□□□ 0.44
SMAD1-201ENST00000302085 SSMEM1Q8WWF3 244 aa17.8■□□□□ 0.44
SMAD1-201ENST00000302085 RAB24Q969Q5 203 aa17.8■□□□□ 0.44
SMAD1-201ENST00000302085 SLC35B3Q9H1N7 401 aa17.8■□□□□ 0.44
SMAD1-201ENST00000302085 GNG13Q9P2W3 67 aa17.8■□□□□ 0.44
SMAD1-201ENST00000302085 SPG11Q96JI7 2443 aa17.8■□□□□ 0.44
SMAD1-201ENST00000302085 HMGB3O15347 200 aaKnown RBP17.8■□□□□ 0.44
SMAD1-201ENST00000302085 SOX15O60248 233 aa17.8■□□□□ 0.44
SMAD1-201ENST00000302085 SNRNP70P08621 437 aaKnown RBP17.8■□□□□ 0.44
SMAD1-201ENST00000302085 DEFA4P12838 97 aa17.8■□□□□ 0.44
SMAD1-201ENST00000302085 AREGP15514 252 aa17.8■□□□□ 0.44
SMAD1-201ENST00000302085 GPX4P36969 197 aaPredicted RBP17.8■□□□□ 0.44
SMAD1-201ENST00000302085 SUB1P53999 127 aaKnown RBP eCLIP17.8■□□□□ 0.44
SMAD1-201ENST00000302085 BTN1A1Q13410 526 aa17.8■□□□□ 0.44
SMAD1-201ENST00000302085 NBR2O15453 112 aa17.79■□□□□ 0.44
SMAD1-201ENST00000302085 CYB5BO43169 146 aa17.79■□□□□ 0.44
SMAD1-201ENST00000302085 PAX1P15863 534 aa17.79■□□□□ 0.44
SMAD1-201ENST00000302085 PAX8Q06710 450 aa17.79■□□□□ 0.44
SMAD1-201ENST00000302085 CACNG8Q8WXS5 425 aa17.79■□□□□ 0.44
SMAD1-201ENST00000302085 TBL2Q9Y4P3 447 aaKnown RBP17.79■□□□□ 0.44
SMAD1-201ENST00000302085 FAM208BQ5VWN6 2430 aa17.79■□□□□ 0.44
SMAD1-201ENST00000302085 IGKV1OR2-108A0A075B7D4 117 aa17.79■□□□□ 0.44
SMAD1-201ENST00000302085 LOC102723971A0A1B0GUV8 181 aa17.79■□□□□ 0.44
SMAD1-201ENST00000302085 SEC14L6B5MCN3 397 aa17.79■□□□□ 0.44
SMAD1-201ENST00000302085 TEX22C9J3V5 150 aa17.79■□□□□ 0.44
SMAD1-201ENST00000302085 PLGLAQ15195 96 aa17.79■□□□□ 0.44
SMAD1-201ENST00000302085 OR2T10Q8NGZ9 312 aa17.79■□□□□ 0.44
SMAD1-201ENST00000302085 OR2T6Q8NHC8 308 aa17.79■□□□□ 0.44
SMAD1-201ENST00000302085 RNASEH2CQ8TDP1 164 aaKnown RBP17.79■□□□□ 0.44
SMAD1-201ENST00000302085 RXFP4Q8TDU9 374 aa17.79■□□□□ 0.44
SMAD1-201ENST00000302085 NKX6-2Q9C056 277 aaPredicted RBP17.79■□□□□ 0.44
SMAD1-201ENST00000302085 UTP20O75691 2785 aaKnown RBP17.78■□□□□ 0.44
SMAD1-201ENST00000302085 NDUFA3O95167 84 aa17.78■□□□□ 0.44
SMAD1-201ENST00000302085 SRP19P09132 144 aaKnown RBP17.78■□□□□ 0.44
SMAD1-201ENST00000302085 RAB31Q13636 194 aa17.78■□□□□ 0.44
SMAD1-201ENST00000302085 HES1Q14469 280 aa17.78■□□□□ 0.44
SMAD1-201ENST00000302085 PVRIGQ6DKI7 326 aa17.78■□□□□ 0.44
SMAD1-201ENST00000302085 SLC16A13Q7RTY0 426 aa17.78■□□□□ 0.44
SMAD1-201ENST00000302085 FNDC4Q9H6D8 234 aaPredicted RBP17.78■□□□□ 0.44
SMAD1-201ENST00000302085 APELAP0DMC3 54 aa17.77■□□□□ 0.44
SMAD1-201ENST00000302085 RPL29P47914 159 aaKnown RBP17.77■□□□□ 0.44
SMAD1-201ENST00000302085 MFAP2P55001 183 aa17.77■□□□□ 0.44
SMAD1-201ENST00000302085 MRPL41Q8IXM3 137 aaKnown RBP17.77■□□□□ 0.44
SMAD1-201ENST00000302085 STPG3Q8N7X2 389 aa17.77■□□□□ 0.44
SMAD1-201ENST00000302085 MALSU1Q96EH3 234 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms