RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 GOLT1BQ9Y3E0 138 aa17.95■□□□□ 0.46
TPM4-201ENST00000300933 AKAP6Q13023 2319 aa17.95■□□□□ 0.46
TPM4-201ENST00000300933 GRIFINA4D1Z8 144 aa17.95■□□□□ 0.46
TPM4-201ENST00000300933 IGKV1-16P04430 117 aa17.95■□□□□ 0.46
TPM4-201ENST00000300933 SFTPCP11686 197 aa17.95■□□□□ 0.46
TPM4-201ENST00000300933 NPPCP23582 126 aa17.95■□□□□ 0.46
TPM4-201ENST00000300933 DLX1P56177 255 aa17.95■□□□□ 0.46
TPM4-201ENST00000300933 TMPRSS3P57727 454 aa17.95■□□□□ 0.46
TPM4-201ENST00000300933 ERVK-16P61578 105 aa17.95■□□□□ 0.46
TPM4-201ENST00000300933 TCTEX1D1Q8N7M0 179 aa17.95■□□□□ 0.46
TPM4-201ENST00000300933 DDB2Q92466 427 aa17.95■□□□□ 0.46
TPM4-201ENST00000300933 RNASE6Q93091 150 aaKnown RBP17.95■□□□□ 0.46
TPM4-201ENST00000300933 PLXNB1O43157 2135 aa17.94■□□□□ 0.46
TPM4-201ENST00000300933 MALRD1Q5VYJ5 2156 aa17.94■□□□□ 0.46
TPM4-201ENST00000300933 KIR2DL5BA0A0G2JN68 375 aa17.94■□□□□ 0.46
TPM4-201ENST00000300933 KIR2DL5BA0A0G2JPC4 375 aa17.94■□□□□ 0.46
TPM4-201ENST00000300933 SRP14P37108 136 aaKnown RBP17.94■□□□□ 0.46
TPM4-201ENST00000300933 RELBQ01201 579 aa17.94■□□□□ 0.46
TPM4-201ENST00000300933 FFAR4Q5NUL3 377 aa17.94■□□□□ 0.46
TPM4-201ENST00000300933 TEX36Q5VZQ5 186 aa17.94■□□□□ 0.46
TPM4-201ENST00000300933 KIR2DL5AQ8N109 375 aa17.94■□□□□ 0.46
TPM4-201ENST00000300933 ZCCHC14Q8WYQ9 949 aaKnown RBP17.94■□□□□ 0.46
TPM4-201ENST00000300933 HRNRQ86YZ3 2850 aaPredicted RBP17.94■□□□□ 0.46
TPM4-201ENST00000300933 OR10J1P30954 320 aa17.94■□□□□ 0.46
TPM4-201ENST00000300933 UBE2G2P60604 165 aa17.94■□□□□ 0.46
TPM4-201ENST00000300933 CTXND1A0A1B0GTU2 59 aa17.93■□□□□ 0.46
TPM4-201ENST00000300933 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.93■□□□□ 0.46
TPM4-201ENST00000300933 TMEM178BH3BS89 294 aa17.93■□□□□ 0.46
TPM4-201ENST00000300933 GCSAMLQ5JQS6 135 aa17.93■□□□□ 0.46
TPM4-201ENST00000300933 TOMM20LQ6UXN7 152 aa17.93■□□□□ 0.46
TPM4-201ENST00000300933 DERL1Q9BUN8 251 aa17.93■□□□□ 0.46
TPM4-201ENST00000300933 SPTAN1Q13813 2472 aaKnown RBP17.93■□□□□ 0.46
TPM4-201ENST00000300933 MED13LQ71F56 2210 aa17.93■□□□□ 0.46
TPM4-201ENST00000300933 PPIAL4EA0A075B759 164 aa17.93■□□□□ 0.46
TPM4-201ENST00000300933 PPIAL4DF5H284 164 aa17.93■□□□□ 0.46
TPM4-201ENST00000300933 DLEU1O43261 78 aa17.93■□□□□ 0.46
TPM4-201ENST00000300933 TYMSP04818 313 aa17.93■□□□□ 0.46
TPM4-201ENST00000300933 RPLP1P05386 114 aaKnown RBP17.93■□□□□ 0.46
TPM4-201ENST00000300933 PPIAL4FP0DN26 164 aa17.93■□□□□ 0.46
TPM4-201ENST00000300933 ZNF439Q8NDP4 499 aa17.93■□□□□ 0.46
TPM4-201ENST00000300933 NEIL1Q96FI4 390 aaPredicted RBP17.93■□□□□ 0.46
TPM4-201ENST00000300933 TMEM147Q9BVK8 224 aa17.93■□□□□ 0.46
TPM4-201ENST00000300933 MANBALQ9NQG1 85 aa17.93■□□□□ 0.46
TPM4-201ENST00000300933 TMEM106BQ9NUM4 274 aa17.93■□□□□ 0.46
TPM4-201ENST00000300933 PPIAL4AQ9Y536 164 aa17.93■□□□□ 0.46
TPM4-201ENST00000300933 C11orf94C9JXX5 98 aa17.92■□□□□ 0.46
TPM4-201ENST00000300933 RELQ04864 619 aaPredicted RBP17.92■□□□□ 0.46
TPM4-201ENST00000300933 TMEM200BQ69YZ2 307 aa17.92■□□□□ 0.46
TPM4-201ENST00000300933 VKORC1Q9BQB6 163 aa17.92■□□□□ 0.46
TPM4-201ENST00000300933 ITPR1Q14643 2758 aa17.92■□□□□ 0.46
TPM4-201ENST00000300933 TRAV38-1A0A0B4J264 116 aa17.92■□□□□ 0.46
TPM4-201ENST00000300933 C1QTNF9P0C862 333 aa17.92■□□□□ 0.46
TPM4-201ENST00000300933 RAB7AP51149 207 aa17.92■□□□□ 0.46
TPM4-201ENST00000300933 RPL15P61313 204 aaKnown RBP17.92■□□□□ 0.46
TPM4-201ENST00000300933 OR4A47Q6IF82 309 aa17.92■□□□□ 0.46
TPM4-201ENST00000300933 DIAPH2-AS1Q14236 149 aa17.91■□□□□ 0.46
TPM4-201ENST00000300933 CIB3Q96Q77 187 aaPredicted RBP17.91■□□□□ 0.46
TPM4-201ENST00000300933 RPUSD1Q9UJJ7 312 aaKnown RBP17.91■□□□□ 0.46
TPM4-201ENST00000300933 hADV38S2A0JD32 116 aa17.91■□□□□ 0.46
TPM4-201ENST00000300933 SRRM4A7MD48 611 aaKnown RBP17.91■□□□□ 0.46
TPM4-201ENST00000300933 CCL21O00585 134 aa17.91■□□□□ 0.46
TPM4-201ENST00000300933 HNF1AP20823 631 aa17.91■□□□□ 0.46
TPM4-201ENST00000300933 OR4S2Q8NH73 311 aa17.91■□□□□ 0.46
TPM4-201ENST00000300933 NPCDR1Q9BY65 106 aa17.91■□□□□ 0.46
TPM4-201ENST00000300933 CTSZQ9UBR2 303 aa17.91■□□□□ 0.46
TPM4-201ENST00000300933 PAM16Q9Y3D7 125 aa17.91■□□□□ 0.46
TPM4-201ENST00000300933 NKX6-3A6NJ46 265 aa17.9■□□□□ 0.46
TPM4-201ENST00000300933 CT45A6P0DMU7 189 aa17.9■□□□□ 0.46
TPM4-201ENST00000300933 CT45A5P0DMU8 189 aa17.9■□□□□ 0.46
TPM4-201ENST00000300933 CT45A7P0DMV0 189 aa17.9■□□□□ 0.46
TPM4-201ENST00000300933 LINC01551Q86U37 167 aa17.9■□□□□ 0.46
TPM4-201ENST00000300933 TCF19Q9Y242 345 aa17.9■□□□□ 0.46
TPM4-201ENST00000300933 PXMP4Q9Y6I8 212 aa17.9■□□□□ 0.46
TPM4-201ENST00000300933 ADMP35318 185 aa17.89■□□□□ 0.45
TPM4-201ENST00000300933 ZNF114Q8NC26 417 aa17.89■□□□□ 0.45
TPM4-201ENST00000300933 NDUFB4O95168 129 aa17.89■□□□□ 0.45
TPM4-201ENST00000300933 ATP5G3P48201 142 aa17.89■□□□□ 0.45
TPM4-201ENST00000300933 SGMS2Q8NHU3 365 aa17.89■□□□□ 0.45
TPM4-201ENST00000300933 CMTM2Q8TAZ6 248 aa17.89■□□□□ 0.45
TPM4-201ENST00000300933 DIRC2Q96SL1 478 aa17.89■□□□□ 0.45
TPM4-201ENST00000300933 PATZ1Q9HBE1 687 aaKnown RBP17.89■□□□□ 0.45
TPM4-201ENST00000300933 LCN2P80188 198 aa17.88■□□□□ 0.45
TPM4-201ENST00000300933 IMMP2LQ96T52 175 aa17.88■□□□□ 0.45
TPM4-201ENST00000300933 ARHGAP32A7KAX9 2087 aa17.88■□□□□ 0.45
TPM4-201ENST00000300933 SIAH2O43255 324 aa17.88■□□□□ 0.45
TPM4-201ENST00000300933 SLC25A48Q6ZT89 311 aaKnown RBP17.88■□□□□ 0.45
TPM4-201ENST00000300933 TMEM204Q9BSN7 226 aa17.88■□□□□ 0.45
TPM4-201ENST00000300933 PPP1R14DQ9NXH3 145 aa17.88■□□□□ 0.45
TPM4-201ENST00000300933 TIMM9Q9Y5J7 89 aa17.88■□□□□ 0.45
TPM4-201ENST00000300933 LINC00312Q9Y6C7 94 aa17.88■□□□□ 0.45
TPM4-201ENST00000300933 RBFOX2O43251 390 aaKnown RBP eCLIP17.87■□□□□ 0.45
TPM4-201ENST00000300933 LY6HO94772 140 aa17.87■□□□□ 0.45
TPM4-201ENST00000300933 VENTXO95231 258 aa17.87■□□□□ 0.45
TPM4-201ENST00000300933 CD1BP29016 333 aa17.87■□□□□ 0.45
TPM4-201ENST00000300933 VDAC2P45880 294 aaPredicted RBP17.87■□□□□ 0.45
TPM4-201ENST00000300933 GNB1P62873 340 aa17.87■□□□□ 0.45
TPM4-201ENST00000300933 FAM122AQ96E09 287 aa17.87■□□□□ 0.45
TPM4-201ENST00000300933 PARD6GQ9BYG4 376 aaPredicted RBP17.87■□□□□ 0.45
TPM4-201ENST00000300933 HIVEP3Q5T1R4 2406 aa17.87■□□□□ 0.45
TPM4-201ENST00000300933 Q6ZWC4 215 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms