RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ENY2Q9NPA8 101 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 KCNIP2Q9NS61 270 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 LSM4Q9Y4Z0 139 aaKnown RBP10.56□□□□□ -0.72
HIF3A-204ENST00000300862 OR51B2Q9Y5P1 312 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 TPRP12270 2363 aaKnown RBP10.56□□□□□ -0.72
HIF3A-204ENST00000300862 KLK10O43240 276 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 KIR2DS2P43631 304 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 THBS3P49746 956 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 TMPRSS3P57727 454 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 LCN2P80188 198 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 MLANAQ16655 118 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 FAM222BQ8WU58 562 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 A8MXE2 369 aa10.55□□□□□ -0.72
HIF3A-204ENST00000300862 CXorf1O96002 111 aa10.55□□□□□ -0.72
HIF3A-204ENST00000300862 GATA2P23769 480 aaPredicted RBP10.55□□□□□ -0.72
HIF3A-204ENST00000300862 GATA4P43694 442 aa10.55□□□□□ -0.72
HIF3A-204ENST00000300862 KCNIP4Q6PIL6 250 aa10.55□□□□□ -0.72
HIF3A-204ENST00000300862 TEPPQ6URK8 271 aa10.55□□□□□ -0.72
HIF3A-204ENST00000300862 ZNF439Q8NDP4 499 aa10.55□□□□□ -0.72
HIF3A-204ENST00000300862 FOXA2Q9Y261 457 aaPredicted RBP10.55□□□□□ -0.72
HIF3A-204ENST00000300862 CUL9Q8IWT3 2517 aa10.55□□□□□ -0.72
HIF3A-204ENST00000300862 TRGV8A0A0C4DH27 118 aa10.55□□□□□ -0.72
HIF3A-204ENST00000300862 ZNF320A2RRD8 509 aa10.55□□□□□ -0.72
HIF3A-204ENST00000300862 A6NNC1 897 aa10.55□□□□□ -0.72
HIF3A-204ENST00000300862 PLXNB1O43157 2135 aa10.55□□□□□ -0.72
HIF3A-204ENST00000300862 CT45A6P0DMU7 189 aa10.55□□□□□ -0.72
HIF3A-204ENST00000300862 CT45A5P0DMU8 189 aa10.55□□□□□ -0.72
HIF3A-204ENST00000300862 CT45A7P0DMV0 189 aa10.55□□□□□ -0.72
HIF3A-204ENST00000300862 RPL29P47914 159 aaKnown RBP10.55□□□□□ -0.72
HIF3A-204ENST00000300862 IGFL3Q6UXB1 125 aa10.55□□□□□ -0.72
HIF3A-204ENST00000300862 OR4P4Q8NGL7 312 aa10.55□□□□□ -0.72
HIF3A-204ENST00000300862 LRFN3Q9BTN0 628 aa10.55□□□□□ -0.72
HIF3A-204ENST00000300862 IL19Q9UHD0 177 aa10.55□□□□□ -0.72
HIF3A-204ENST00000300862 TRAPPC1Q9Y5R8 145 aa10.55□□□□□ -0.72
HIF3A-204ENST00000300862 J3QR06 171 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 GCHFRP30047 84 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 TIMP3P35625 211 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 REG1BP48304 166 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 ZNF788Q6ZQV5 615 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 WFDC8Q8IUA0 241 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 MS4A10Q96PG2 267 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 F6UZH7 168 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 CIDEAO60543 219 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 CCL3L1P16619 93 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 CD33P20138 364 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 OR10J1P30954 320 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 MIR17HGQ75NE6 70 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 OR10W1Q8NGF6 305 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 SGMS2Q8NHU3 365 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 OCC1Q8TAD7 63 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 FAM216AQ8WUB2 273 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 TBX15Q96SF7 602 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 TMEM208Q9BTX3 173 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 SLC35D1Q9NTN3 355 aa10.54□□□□□ -0.72
HIF3A-204ENST00000300862 RPL31P62899 125 aaKnown RBP10.53□□□□□ -0.72
HIF3A-204ENST00000300862 TMEM249Q2WGJ8 235 aa10.53□□□□□ -0.72
HIF3A-204ENST00000300862 SFRP2Q96HF1 295 aa10.53□□□□□ -0.72
HIF3A-204ENST00000300862 SFXN3Q9BWM7 321 aa10.53□□□□□ -0.72
HIF3A-204ENST00000300862 CEP295Q9C0D2 2601 aa10.53□□□□□ -0.72
HIF3A-204ENST00000300862 NAV3Q8IVL0 2385 aa10.53□□□□□ -0.72
HIF3A-204ENST00000300862 IGKV1OR2-108A0A075B7D4 117 aa10.53□□□□□ -0.72
HIF3A-204ENST00000300862 IRF2P14316 349 aa10.53□□□□□ -0.72
HIF3A-204ENST00000300862 TNFSF4P23510 183 aa10.53□□□□□ -0.72
HIF3A-204ENST00000300862 PLEKHA3Q9HB20 300 aa10.53□□□□□ -0.72
HIF3A-204ENST00000300862 RPUSD1Q9UJJ7 312 aaKnown RBP10.53□□□□□ -0.72
HIF3A-204ENST00000300862 TP53TG3Q9ULZ0 132 aa10.53□□□□□ -0.72
HIF3A-204ENST00000300862 ITGB1BP1O14713 200 aa10.52□□□□□ -0.73
HIF3A-204ENST00000300862 DLEU1O43261 78 aa10.52□□□□□ -0.73
HIF3A-204ENST00000300862 TACC2O95359 2948 aa10.52□□□□□ -0.73
HIF3A-204ENST00000300862 NPSP0C0P6 89 aa10.52□□□□□ -0.73
HIF3A-204ENST00000300862 CEACAM8P31997 349 aaPredicted RBP10.52□□□□□ -0.73
HIF3A-204ENST00000300862 ADMP35318 185 aa10.52□□□□□ -0.73
HIF3A-204ENST00000300862 LINC00310P59036 64 aa10.52□□□□□ -0.73
HIF3A-204ENST00000300862 TDRG1Q3Y452 100 aa10.52□□□□□ -0.73
HIF3A-204ENST00000300862 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.52□□□□□ -0.73
HIF3A-204ENST00000300862 IMMP2LQ96T52 175 aa10.52□□□□□ -0.73
HIF3A-204ENST00000300862 MUC6Q6W4X9 2439 aa10.52□□□□□ -0.73
HIF3A-204ENST00000300862 MDFIC2A0A1B0GVS7 189 aa10.52□□□□□ -0.73
HIF3A-204ENST00000300862 GRIFINA4D1Z8 144 aa10.52□□□□□ -0.73
HIF3A-204ENST00000300862 ZNF705FA8MVS1 300 aaPredicted RBP10.52□□□□□ -0.73
HIF3A-204ENST00000300862 SLC17A3O00476 420 aa10.52□□□□□ -0.73
HIF3A-204ENST00000300862 FCN3O75636 299 aa10.52□□□□□ -0.73
HIF3A-204ENST00000300862 LINC00869P0C866 280 aa10.52□□□□□ -0.73
HIF3A-204ENST00000300862 ZNF705DP0CH99 300 aaPredicted RBP10.52□□□□□ -0.73
HIF3A-204ENST00000300862 ZNF705BP0CI00 300 aaPredicted RBP10.52□□□□□ -0.73
HIF3A-204ENST00000300862 SAA1P0DJI8 122 aaPredicted RBP10.52□□□□□ -0.73
HIF3A-204ENST00000300862 CD99P14209 185 aa10.52□□□□□ -0.73
HIF3A-204ENST00000300862 RHOBP62745 196 aa10.52□□□□□ -0.73
HIF3A-204ENST00000300862 HLA-DRB5Q30154 266 aa10.52□□□□□ -0.73
HIF3A-204ENST00000300862 ZNF705AQ6ZN79 300 aaPredicted RBP10.52□□□□□ -0.73
HIF3A-204ENST00000300862 SLC25A48Q6ZT89 311 aaKnown RBP10.52□□□□□ -0.73
HIF3A-204ENST00000300862 Q6ZWC4 215 aa10.52□□□□□ -0.73
HIF3A-204ENST00000300862 MRPL20Q9BYC9 149 aaKnown RBP10.52□□□□□ -0.73
HIF3A-204ENST00000300862 ELOVL5Q9NYP7 299 aa10.52□□□□□ -0.73
HIF3A-204ENST00000300862 ABCA1O95477 2261 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 TEX50A0A1B0GTY4 177 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 K7EN84 100 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 UPK2O00526 184 aa10.51□□□□□ -0.73
HIF3A-204ENST00000300862 RPLP1P05386 114 aaKnown RBP10.51□□□□□ -0.73
HIF3A-204ENST00000300862 RAB31Q13636 194 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms