RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 ZNF430Q9H8G1 570 aaPredicted RBP11.11□□□□□ -0.63
CTDP1-202ENST00000299543 COX11Q9Y6N1 276 aa11.11□□□□□ -0.63
CTDP1-202ENST00000299543 SLC17A3O00476 420 aa11.11□□□□□ -0.63
CTDP1-202ENST00000299543 ARL14EPLP0DKL9 152 aa11.11□□□□□ -0.63
CTDP1-202ENST00000299543 TCL1AP56279 114 aa11.11□□□□□ -0.63
CTDP1-202ENST00000299543 HTD2P86397 168 aa11.11□□□□□ -0.63
CTDP1-202ENST00000299543 MSMPQ1L6U9 139 aa11.11□□□□□ -0.63
CTDP1-202ENST00000299543 MORN2Q502X0 79 aa11.11□□□□□ -0.63
CTDP1-202ENST00000299543 MS4A5Q9H3V2 200 aa11.11□□□□□ -0.63
CTDP1-202ENST00000299543 WASHC3Q9Y3C0 194 aa11.11□□□□□ -0.63
CTDP1-202ENST00000299543 TRAV17A0A0B4J275 112 aa11.11□□□□□ -0.63
CTDP1-202ENST00000299543 SAP30O75446 220 aa11.11□□□□□ -0.63
CTDP1-202ENST00000299543 RELBQ01201 579 aa11.11□□□□□ -0.63
CTDP1-202ENST00000299543 Q56UQ5 140 aa11.11□□□□□ -0.63
CTDP1-202ENST00000299543 PLA2G2CQ5R387 149 aa11.11□□□□□ -0.63
CTDP1-202ENST00000299543 DUX4L9Q6RFH8 374 aaPredicted RBP11.11□□□□□ -0.63
CTDP1-202ENST00000299543 BHLHA15Q7RTS1 189 aaPredicted RBP11.11□□□□□ -0.63
CTDP1-202ENST00000299543 MEGF9Q9H1U4 602 aa11.11□□□□□ -0.63
CTDP1-202ENST00000299543 TBL2Q9Y4P3 447 aaKnown RBP11.11□□□□□ -0.63
CTDP1-202ENST00000299543 ADH4P08319 380 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 WNT2P09544 360 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 P0C879 139 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 CSTL1Q9H114 145 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 SNURFLB1AK76 121 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 GNB1P62873 340 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 RPRMLQ8N4K4 120 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 Q8N976 141 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 ZNF439Q8NDP4 499 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 PPP1R35Q8TAP8 253 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 ITLN1Q8WWA0 313 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 CORO2AQ92828 525 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 GSX1Q9H4S2 264 aaPredicted RBP11.1□□□□□ -0.63
CTDP1-202ENST00000299543 TMEM140Q9NV12 185 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 PXMP4Q9Y6I8 212 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 C15orf65H3BRN8 121 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 ORAOV1Q8WV07 137 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 BORCS7Q96B45 105 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 CST9LQ9H4G1 147 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 ENY2Q9NPA8 101 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 SLC35D1Q9NTN3 355 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 NAT8BQ9UHF3 227 aa11.1□□□□□ -0.63
CTDP1-202ENST00000299543 ZNF891A8MT65 544 aaPredicted RBP11.09□□□□□ -0.63
CTDP1-202ENST00000299543 PRR33A8MZF0 331 aa11.09□□□□□ -0.63
CTDP1-202ENST00000299543 MGST1P10620 155 aaKnown RBP11.09□□□□□ -0.63
CTDP1-202ENST00000299543 TNFSF4P23510 183 aa11.09□□□□□ -0.63
CTDP1-202ENST00000299543 EIF4EBP1Q13541 118 aaPredicted RBP11.09□□□□□ -0.63
CTDP1-202ENST00000299543 GCSAMQ8N6F7 178 aa11.09□□□□□ -0.63
CTDP1-202ENST00000299543 OR4B1Q8NGF8 309 aa11.09□□□□□ -0.63
CTDP1-202ENST00000299543 Q8TCH9 128 aa11.09□□□□□ -0.63
CTDP1-202ENST00000299543 MRPL18Q9H0U6 180 aaKnown RBP11.09□□□□□ -0.63
CTDP1-202ENST00000299543 ZNRD1Q9P1U0 126 aa11.09□□□□□ -0.63
CTDP1-202ENST00000299543 ZNF253O75346 499 aa11.09□□□□□ -0.63
CTDP1-202ENST00000299543 OCIAD2Q56VL3 154 aa11.09□□□□□ -0.63
CTDP1-202ENST00000299543 TREML4Q6UXN2 200 aa11.09□□□□□ -0.63
CTDP1-202ENST00000299543 WDR83OSQ9Y284 106 aa11.09□□□□□ -0.63
CTDP1-202ENST00000299543 CIDEAO60543 219 aa11.08□□□□□ -0.64
CTDP1-202ENST00000299543 IGLC2P0DOY2 106 aa11.08□□□□□ -0.64
CTDP1-202ENST00000299543 IGLC3P0DOY3 106 aa11.08□□□□□ -0.64
CTDP1-202ENST00000299543 ACSF3Q4G176 576 aaPredicted RBP11.08□□□□□ -0.64
CTDP1-202ENST00000299543 ZGRF1Q86YA3 2104 aa11.08□□□□□ -0.64
CTDP1-202ENST00000299543 ANAPC16Q96DE5 110 aa11.08□□□□□ -0.64
CTDP1-202ENST00000299543 TCF19Q9Y242 345 aa11.08□□□□□ -0.64
CTDP1-202ENST00000299543 MGST3O14880 152 aa11.08□□□□□ -0.64
CTDP1-202ENST00000299543 SPATA31B1PQ5VZV4 182 aa11.08□□□□□ -0.64
CTDP1-202ENST00000299543 PRR7Q8TB68 274 aa11.08□□□□□ -0.64
CTDP1-202ENST00000299543 CALYQ9NYX4 217 aa11.08□□□□□ -0.64
CTDP1-202ENST00000299543 SCO2A0A1W2PP80 73 aa11.08□□□□□ -0.64
CTDP1-202ENST00000299543 ASPHD1Q5U4P2 390 aa11.08□□□□□ -0.64
CTDP1-202ENST00000299543 AMMECR1LQ6DCA0 310 aa11.08□□□□□ -0.64
CTDP1-202ENST00000299543 C1orf229Q6ZS94 237 aaPredicted RBP11.08□□□□□ -0.64
CTDP1-202ENST00000299543 CENPVQ7Z7K6 275 aaPredicted RBP11.08□□□□□ -0.64
CTDP1-202ENST00000299543 ZNF71Q9NQZ8 489 aaPredicted RBP11.08□□□□□ -0.64
CTDP1-202ENST00000299543 RBFOX2O43251 390 aaKnown RBP eCLIP11.07□□□□□ -0.648e-6■■■■□ 20.3
CTDP1-202ENST00000299543 IGHG3P01860 377 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 RND1Q92730 232 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 SNRNP40Q96DI7 357 aaKnown RBP11.07□□□□□ -0.64
CTDP1-202ENST00000299543 RCHY1Q96PM5 261 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 NRN1Q9NPD7 142 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 SERTAD4Q9NUC0 356 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 SH3BGRL2Q9UJC5 107 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 ARL2-SNX15V9GYD0 113 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 PLXNB1O43157 2135 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 ATMQ13315 3056 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 OR2T8A6NH00 312 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 FTH1P19P0C7X4 201 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 CTRLP40313 264 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 PAFAH1B2P68402 229 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 LINC01551Q86U37 167 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 ZCCHC24Q8N2G6 241 aaKnown RBP11.07□□□□□ -0.64
CTDP1-202ENST00000299543 CCL13Q99616 98 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 MGST2Q99735 147 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 LRFN3Q9BTN0 628 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 APC2O95996 2303 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 COL27A1Q8IZC6 1860 aaPredicted RBP11.07□□□□□ -0.64
CTDP1-202ENST00000299543 IGHV2-70DA0A0C4DH43 119 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 FOXH1O75593 365 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 GATA2P23769 480 aaPredicted RBP11.07□□□□□ -0.64
CTDP1-202ENST00000299543 KLHDC1Q8N7A1 406 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 TCTEX1D1Q8N7M0 179 aa11.07□□□□□ -0.64
CTDP1-202ENST00000299543 OR4P4Q8NGL7 312 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms