RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 LRRC29Q8WV35 223 aa9.45□□□□□ -0.9
TRUB1-201ENST00000298746 COQ2Q96H96 371 aa9.45□□□□□ -0.9
TRUB1-201ENST00000298746 ZNF576Q9H609 170 aa9.45□□□□□ -0.9
TRUB1-201ENST00000298746 TRAV9-2A0A087WT02 112 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 C9JCJ5 164 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 IGHV3-48P01763 117 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 CSN3P07498 182 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 DUTP33316 252 aaKnown RBP9.44□□□□□ -0.9
TRUB1-201ENST00000298746 ZNF137PP52743 207 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 SLAQ13239 276 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 LPAL2Q16609 132 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 VWC2Q2TAL6 325 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 ZNF718Q3SXZ3 478 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 SMIM15Q7Z3B0 74 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 SAP25Q8TEE9 199 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 PLAUP00749 431 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 PPP1R35Q8TAP8 253 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 TP73-AS1Q9UF72 201 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 PLCE1Q9P212 2302 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 IGHV3OR15-7A0A075B7D8 119 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 PATE3B3GLJ2 98 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 LINC00869P0C866 280 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 ESDP10768 282 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 NIT1Q86X76 327 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 TMEM251Q8N6I4 163 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 DEFB108BQ8NET1 73 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 SAP30LQ9HAJ7 183 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 OSTCQ9NRP0 149 aa9.44□□□□□ -0.9
TRUB1-201ENST00000298746 OR4C46A6NHA9 309 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 SH2D7A6NKC9 451 aaPredicted RBP9.43□□□□□ -0.9
TRUB1-201ENST00000298746 IGLL1P15814 213 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 MPV17P39210 176 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 CA7P43166 264 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 TCTAP57738 103 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 VHLLQ6RSH7 139 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 OR4S2Q8NH73 311 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 BLNKQ8WV28 456 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 PMCHL2Q9BQD1 86 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 MCRIP2Q9BUT9 160 aaKnown RBP9.43□□□□□ -0.9
TRUB1-201ENST00000298746 TTTY12Q9BZ98 90 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 PCNX2A6NKB5 2137 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 IGKV3D-15A0A087WSY6 115 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 SNAI2O43623 268 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 SMPD2O60906 423 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 TOX4O94842 621 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 ADH4P08319 380 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 SELENOVP59797 346 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 RBX1P62877 108 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 SSX8Q7RTT4 187 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 C18orf32Q8TCD1 76 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 KLF14Q8TD94 323 aaPredicted RBP9.43□□□□□ -0.9
TRUB1-201ENST00000298746 FAM181BA6NEQ2 426 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 J3QR06 171 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 DUSP3P51452 185 aaPredicted RBP9.43□□□□□ -0.9
TRUB1-201ENST00000298746 OR2Z1Q8NG97 314 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 CT55Q8WUE5 264 aa9.43□□□□□ -0.9
TRUB1-201ENST00000298746 PLXNB1O43157 2135 aa9.42□□□□□ -0.9
TRUB1-201ENST00000298746 FREM2Q5SZK8 3169 aa9.42□□□□□ -0.9
TRUB1-201ENST00000298746 IGHV2OR16-5A0A0B4J2B6 119 aa9.42□□□□□ -0.9
TRUB1-201ENST00000298746 CYC1P08574 325 aa9.42□□□□□ -0.9
TRUB1-201ENST00000298746 MLANAQ16655 118 aa9.42□□□□□ -0.9
TRUB1-201ENST00000298746 C6orf15Q6UXA7 325 aaPredicted RBP9.42□□□□□ -0.9
TRUB1-201ENST00000298746 FAM168AQ92567 244 aa9.42□□□□□ -0.9
TRUB1-201ENST00000298746 DAZAP1Q96EP5 407 aaKnown RBP9.42□□□□□ -0.9
TRUB1-201ENST00000298746 TMEM70Q9BUB7 260 aa9.42□□□□□ -0.9
TRUB1-201ENST00000298746 CHODLQ9H9P2 273 aa9.42□□□□□ -0.9
TRUB1-201ENST00000298746 CNOT1A5YKK6 2376 aaKnown RBP9.42□□□□□ -0.9
TRUB1-201ENST00000298746 hDV102S1A0JD36 115 aa9.42□□□□□ -0.9
TRUB1-201ENST00000298746 IZUMO1RA6ND01 250 aa9.42□□□□□ -0.9
TRUB1-201ENST00000298746 COX7A2P2O60397 106 aa9.42□□□□□ -0.9
TRUB1-201ENST00000298746 PRDX2P32119 198 aa9.42□□□□□ -0.9
TRUB1-201ENST00000298746 CTRLP40313 264 aa9.42□□□□□ -0.9
TRUB1-201ENST00000298746 HSPE1P61604 102 aaKnown RBP9.42□□□□□ -0.9
TRUB1-201ENST00000298746 GABRA6Q16445 453 aa9.42□□□□□ -0.9
TRUB1-201ENST00000298746 ACP7Q6ZNF0 438 aa9.42□□□□□ -0.9
TRUB1-201ENST00000298746 Q8N7P7 452 aa9.42□□□□□ -0.9
TRUB1-201ENST00000298746 OR2V2Q96R30 315 aa9.42□□□□□ -0.9
TRUB1-201ENST00000298746 AMMECR1Q9Y4X0 333 aaPredicted RBP9.42□□□□□ -0.9
TRUB1-201ENST00000298746 WNK2Q9Y3S1 2297 aa9.42□□□□□ -0.9
TRUB1-201ENST00000298746 TRAV5A0A0B4J249 113 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 P0C879 139 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 PSG1P11464 419 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 AREGP15514 252 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 ERVK11-1P61568 191 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 ZNF841Q6ZN19 808 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 Q6ZR03 302 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 RBMXL3Q8N7X1 1067 aaKnown RBP9.41□□□□□ -0.9
TRUB1-201ENST00000298746 ZNRF1Q8ND25 227 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 OR8B3Q8NGG8 313 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 MRPS16Q9Y3D3 137 aaKnown RBP9.41□□□□□ -0.9
TRUB1-201ENST00000298746 OR51B2Q9Y5P1 312 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 NCKAP5O14513 1909 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 LY6G6EA0A0G2JKS1 128 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 A0A1W2PN81 502 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 AHRRA9YTQ3 701 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 ITGB1BP1O14713 200 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 CD24P25063 80 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 AMMECR1LQ6DCA0 310 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 CXXC4Q9H2H0 198 aa9.41□□□□□ -0.9
TRUB1-201ENST00000298746 U3KQA8 63 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms