RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 INS-IGF2F8WCM5 200 aa19.41■□□□□ 0.7
TRIM54-201ENST00000296098 LYNX1G3V0Z9 82 aa19.41■□□□□ 0.7
TRIM54-201ENST00000296098 IGLV2-23P01705 113 aa19.41■□□□□ 0.7
TRIM54-201ENST00000296098 LINC00869P0C866 280 aa19.41■□□□□ 0.7
TRIM54-201ENST00000296098 LYNX1P0DP58 116 aa19.41■□□□□ 0.7
TRIM54-201ENST00000296098 CHRNA7P36544 502 aa19.41■□□□□ 0.7
TRIM54-201ENST00000296098 ERHP84090 104 aaKnown RBP19.41■□□□□ 0.7
TRIM54-201ENST00000296098 C11orf42Q8N5U0 333 aa19.41■□□□□ 0.7
TRIM54-201ENST00000296098 POLEQ07864 2286 aa19.41■□□□□ 0.7
TRIM54-201ENST00000296098 TNCP24821 2201 aa19.41■□□□□ 0.7
TRIM54-201ENST00000296098 DLL1O00548 723 aa19.41■□□□□ 0.7
TRIM54-201ENST00000296098 TRGC2P03986 189 aa19.41■□□□□ 0.7
TRIM54-201ENST00000296098 GAMTQ14353 236 aa19.41■□□□□ 0.7
TRIM54-201ENST00000296098 ADGRG4Q8IZF6 3080 aa19.41■□□□□ 0.7
TRIM54-201ENST00000296098 SMG1Q96Q15 3661 aaKnown RBP19.4■□□□□ 0.7
TRIM54-201ENST00000296098 NDUFB4O95168 129 aa19.4■□□□□ 0.7
TRIM54-201ENST00000296098 MC5RP33032 325 aa19.4■□□□□ 0.7
TRIM54-201ENST00000296098 CD69Q07108 199 aa19.4■□□□□ 0.7
TRIM54-201ENST00000296098 ANAPC16Q96DE5 110 aa19.4■□□□□ 0.7
TRIM54-201ENST00000296098 SLC35E1Q96K37 410 aa19.4■□□□□ 0.7
TRIM54-201ENST00000296098 OR5B12Q96R08 314 aa19.4■□□□□ 0.7
TRIM54-201ENST00000296098 TCEAL7Q9BRU2 100 aa19.4■□□□□ 0.7
TRIM54-201ENST00000296098 DOK5Q9P104 306 aa19.4■□□□□ 0.7
TRIM54-201ENST00000296098 IGKV1OR2-108A0A075B7D4 117 aa19.39■□□□□ 0.69
TRIM54-201ENST00000296098 MT-CO2P00403 227 aa19.39■□□□□ 0.69
TRIM54-201ENST00000296098 COL8A2P25067 703 aa19.39■□□□□ 0.69
TRIM54-201ENST00000296098 S100PP25815 95 aa19.39■□□□□ 0.69
TRIM54-201ENST00000296098 ADORA2A-AS1P86434 159 aa19.39■□□□□ 0.69
TRIM54-201ENST00000296098 VMA21Q3ZAQ7 101 aa19.39■□□□□ 0.69
TRIM54-201ENST00000296098 FSTL3O95633 263 aa19.39■□□□□ 0.69
TRIM54-201ENST00000296098 IGHV2-70P01814 119 aa19.39■□□□□ 0.69
TRIM54-201ENST00000296098 SMIM6P0DI80 62 aa19.39■□□□□ 0.69
TRIM54-201ENST00000296098 OR10J1P30954 320 aa19.39■□□□□ 0.69
TRIM54-201ENST00000296098 GALR1P47211 349 aa19.39■□□□□ 0.69
TRIM54-201ENST00000296098 NECAP1Q8NC96 275 aa19.39■□□□□ 0.69
TRIM54-201ENST00000296098 TNFRSF14Q92956 283 aa19.39■□□□□ 0.69
TRIM54-201ENST00000296098 DERL1Q9BUN8 251 aa19.39■□□□□ 0.69
TRIM54-201ENST00000296098 ZNF430Q9H8G1 570 aaPredicted RBP19.39■□□□□ 0.69
TRIM54-201ENST00000296098 YTHDF2Q9Y5A9 579 aaKnown RBP19.39■□□□□ 0.69
TRIM54-201ENST00000296098 PCP4L1A6NKN8 68 aa19.38■□□□□ 0.69
TRIM54-201ENST00000296098 HIST1H2BKO60814 126 aa19.38■□□□□ 0.69
TRIM54-201ENST00000296098 CLN5O75503 358 aa19.38■□□□□ 0.69
TRIM54-201ENST00000296098 HIST1H2BJP06899 126 aa19.38■□□□□ 0.69
TRIM54-201ENST00000296098 PFN1P07737 140 aaKnown RBP19.38■□□□□ 0.69
TRIM54-201ENST00000296098 HIST1H2BOP23527 126 aa19.38■□□□□ 0.69
TRIM54-201ENST00000296098 HIST1H2BBP33778 126 aa19.38■□□□□ 0.69
TRIM54-201ENST00000296098 HIST1H2BDP58876 126 aa19.38■□□□□ 0.69
TRIM54-201ENST00000296098 HIST1H2BCP62807 126 aa19.38■□□□□ 0.69
TRIM54-201ENST00000296098 HIST2H2BEQ16778 126 aa19.38■□□□□ 0.69
TRIM54-201ENST00000296098 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.38■□□□□ 0.69
TRIM54-201ENST00000296098 FAM78BQ5VT40 261 aa19.38■□□□□ 0.69
TRIM54-201ENST00000296098 SLC16A13Q7RTY0 426 aa19.38■□□□□ 0.69
TRIM54-201ENST00000296098 OR4P4Q8NGL7 312 aa19.38■□□□□ 0.69
TRIM54-201ENST00000296098 HIST1H2BHQ93079 126 aa19.38■□□□□ 0.69
TRIM54-201ENST00000296098 HIST1H2BNQ99877 126 aa19.38■□□□□ 0.69
TRIM54-201ENST00000296098 HIST1H2BMQ99879 126 aa19.38■□□□□ 0.69
TRIM54-201ENST00000296098 E7EUB6 86 aa19.37■□□□□ 0.69
TRIM54-201ENST00000296098 PPOXP50336 477 aa19.37■□□□□ 0.69
TRIM54-201ENST00000296098 HLA-DRB5Q30154 266 aa19.37■□□□□ 0.69
TRIM54-201ENST00000296098 C10orf55Q5SWW7 151 aa19.37■□□□□ 0.69
TRIM54-201ENST00000296098 ZNF841Q6ZN19 808 aa19.37■□□□□ 0.69
TRIM54-201ENST00000296098 LINC01551Q86U37 167 aa19.37■□□□□ 0.69
TRIM54-201ENST00000296098 CACNG8Q8WXS5 425 aa19.37■□□□□ 0.69
TRIM54-201ENST00000296098 FUT9Q9Y231 359 aa19.37■□□□□ 0.69
TRIM54-201ENST00000296098 IGHV2-26A0A0B4J1V2 119 aa19.37■□□□□ 0.69
TRIM54-201ENST00000296098 SLC25A17O43808 307 aa19.37■□□□□ 0.69
TRIM54-201ENST00000296098 ACTL6BO94805 426 aa19.37■□□□□ 0.69
TRIM54-201ENST00000296098 NDUFA6P56556 154 aa19.37■□□□□ 0.69
TRIM54-201ENST00000296098 CDSNQ15517 529 aa19.37■□□□□ 0.69
TRIM54-201ENST00000296098 MIR17HGQ75NE6 70 aa19.37■□□□□ 0.69
TRIM54-201ENST00000296098 TMEM204Q9BSN7 226 aa19.37■□□□□ 0.69
TRIM54-201ENST00000296098 SCO2A0A1W2PP80 73 aa19.36■□□□□ 0.69
TRIM54-201ENST00000296098 CGB1A6NKQ9 187 aa19.36■□□□□ 0.69
TRIM54-201ENST00000296098 FOXH1O75593 365 aa19.36■□□□□ 0.69
TRIM54-201ENST00000296098 S100A9P06702 114 aaKnown RBP19.36■□□□□ 0.69
TRIM54-201ENST00000296098 GPX4P36969 197 aaPredicted RBP19.36■□□□□ 0.69
TRIM54-201ENST00000296098 OR5T1Q8NG75 326 aa19.36■□□□□ 0.69
TRIM54-201ENST00000296098 PYGO2Q9BRQ0 406 aa19.36■□□□□ 0.69
TRIM54-201ENST00000296098 KALRNO60229 2985 aa19.36■□□□□ 0.69
TRIM54-201ENST00000296098 HOXA5P20719 270 aa19.35■□□□□ 0.69
TRIM54-201ENST00000296098 WT1-ASQ06250 92 aa19.35■□□□□ 0.69
TRIM54-201ENST00000296098 MLANAQ16655 118 aa19.35■□□□□ 0.69
TRIM54-201ENST00000296098 ELOVL1Q9BW60 279 aa19.35■□□□□ 0.69
TRIM54-201ENST00000296098 ENSAO43768 121 aaKnown RBP19.35■□□□□ 0.69
TRIM54-201ENST00000296098 LGALS7P47929 136 aa19.35■□□□□ 0.69
TRIM54-201ENST00000296098 PRRX1P54821 245 aa19.35■□□□□ 0.69
TRIM54-201ENST00000296098 TPSG1Q9NRR2 321 aa19.35■□□□□ 0.69
TRIM54-201ENST00000296098 RNASEH2CQ8TDP1 164 aaKnown RBP19.34■□□□□ 0.69
TRIM54-201ENST00000296098 IGF2RP11717 2491 aa19.34■□□□□ 0.69
TRIM54-201ENST00000296098 IGHV3-72A0A0B4J1Y9 119 aa19.34■□□□□ 0.69
TRIM54-201ENST00000296098 IGLV1-47P01700 117 aa19.34■□□□□ 0.69
TRIM54-201ENST00000296098 CD99P14209 185 aa19.34■□□□□ 0.69
TRIM54-201ENST00000296098 GATA2P23769 480 aaPredicted RBP19.34■□□□□ 0.69
TRIM54-201ENST00000296098 SUB1P53999 127 aaKnown RBP eCLIP19.34■□□□□ 0.69
TRIM54-201ENST00000296098 PNKDQ8N490 385 aa19.34■□□□□ 0.69
TRIM54-201ENST00000296098 FRZBQ92765 325 aa19.34■□□□□ 0.69
TRIM54-201ENST00000296098 ACY3Q96HD9 319 aa19.34■□□□□ 0.69
TRIM54-201ENST00000296098 C19orf24Q9BVV8 132 aa19.34■□□□□ 0.69
TRIM54-201ENST00000296098 CLEC7AQ9BXN2 247 aa19.34■□□□□ 0.69
TRIM54-201ENST00000296098 SRD5A3Q9H8P0 318 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms