RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 DEFA4P12838 97 aa17.59■□□□□ 0.41
LINC01116-201ENST00000295549 HOXA1P49639 335 aaPredicted RBP17.59■□□□□ 0.41
LINC01116-201ENST00000295549 IAH1Q2TAA2 248 aaPredicted RBP17.59■□□□□ 0.41
LINC01116-201ENST00000295549 ZNF491Q8N8L2 437 aa17.59■□□□□ 0.41
LINC01116-201ENST00000295549 ZNF114Q8NC26 417 aa17.59■□□□□ 0.41
LINC01116-201ENST00000295549 ENY2Q9NPA8 101 aa17.59■□□□□ 0.41
LINC01116-201ENST00000295549 CDX1P47902 265 aaPredicted RBP17.58■□□□□ 0.41
LINC01116-201ENST00000295549 TPPP2P59282 170 aa17.58■□□□□ 0.41
LINC01116-201ENST00000295549 RPL23AP62750 156 aaKnown RBP17.58■□□□□ 0.41
LINC01116-201ENST00000295549 HIST2H2BDQ6DRA6 164 aa17.58■□□□□ 0.41
LINC01116-201ENST00000295549 C19orf35Q6ZS72 473 aa17.58■□□□□ 0.41
LINC01116-201ENST00000295549 UBE2E2Q96LR5 201 aa17.58■□□□□ 0.41
LINC01116-201ENST00000295549 FANCD2OSQ96PS1 177 aa17.58■□□□□ 0.41
LINC01116-201ENST00000295549 F11RQ9Y624 299 aaKnown RBP17.58■□□□□ 0.41
LINC01116-201ENST00000295549 CEBPZOSA8MTT3 80 aa17.57■□□□□ 0.4
LINC01116-201ENST00000295549 ADARB2-AS1A8MUL3 147 aa17.57■□□□□ 0.4
LINC01116-201ENST00000295549 CCSO14618 274 aa17.57■□□□□ 0.4
LINC01116-201ENST00000295549 PRH1P02810 166 aa17.57■□□□□ 0.4
LINC01116-201ENST00000295549 HIST1H1BP16401 226 aaKnown RBP17.57■□□□□ 0.4
LINC01116-201ENST00000295549 NECAP1Q8NC96 275 aa17.57■□□□□ 0.4
LINC01116-201ENST00000295549 OR4D5Q8NGN0 318 aa17.57■□□□□ 0.4
LINC01116-201ENST00000295549 OR1L6Q8NGR2 347 aa17.57■□□□□ 0.4
LINC01116-201ENST00000295549 OR1P1Q8NH06 330 aa17.57■□□□□ 0.4
LINC01116-201ENST00000295549 ALG5Q9Y673 324 aa17.57■□□□□ 0.4
LINC01116-201ENST00000295549 IGLV11-55A0A075B6I3 123 aa17.56■□□□□ 0.4
LINC01116-201ENST00000295549 C13orf42A0A1B0GVH6 325 aa17.56■□□□□ 0.4
LINC01116-201ENST00000295549 CYB5BO43169 146 aa17.56■□□□□ 0.4
LINC01116-201ENST00000295549 NXPH3O95157 252 aa17.56■□□□□ 0.4
LINC01116-201ENST00000295549 ID3Q02535 119 aa17.56■□□□□ 0.4
LINC01116-201ENST00000295549 C2orf68Q2NKX9 166 aa17.56■□□□□ 0.4
LINC01116-201ENST00000295549 KHDC1LQ5JSQ8 128 aa17.56■□□□□ 0.4
LINC01116-201ENST00000295549 USMG5Q96IX5 58 aa17.56■□□□□ 0.4
LINC01116-201ENST00000295549 P2RX4Q99571 388 aa17.56■□□□□ 0.4
LINC01116-201ENST00000295549 DMRT1Q9Y5R6 373 aa17.56■□□□□ 0.4
LINC01116-201ENST00000295549 A0A0G2JLM5 398 aa17.55■□□□□ 0.4
LINC01116-201ENST00000295549 C5orf51A6NDU8 294 aa17.55■□□□□ 0.4
LINC01116-201ENST00000295549 FAM223BA6NKX1 122 aa17.55■□□□□ 0.4
LINC01116-201ENST00000295549 FAM25EA8MYX2 175 aa17.55■□□□□ 0.4
LINC01116-201ENST00000295549 SSNA1O43805 119 aa17.55■□□□□ 0.4
LINC01116-201ENST00000295549 MED6O75586 246 aa17.55■□□□□ 0.4
LINC01116-201ENST00000295549 RHOGP84095 191 aa17.55■□□□□ 0.4
LINC01116-201ENST00000295549 FAM223AQ8IWN6 122 aa17.55■□□□□ 0.4
LINC01116-201ENST00000295549 ZBTB8BQ8NAP8 495 aaPredicted RBP17.55■□□□□ 0.4
LINC01116-201ENST00000295549 DTD1Q8TEA8 209 aa17.55■□□□□ 0.4
LINC01116-201ENST00000295549 RBKSQ9H477 322 aa17.55■□□□□ 0.4
LINC01116-201ENST00000295549 HEYLQ9NQ87 328 aaPredicted RBP17.55■□□□□ 0.4
LINC01116-201ENST00000295549 SNCAP37840 140 aa17.55■□□□□ 0.4
LINC01116-201ENST00000295549 NKX2-1P43699 371 aaPredicted RBP17.55■□□□□ 0.4
LINC01116-201ENST00000295549 BSXQ3C1V8 233 aa17.55■□□□□ 0.4
LINC01116-201ENST00000295549 GSG1LQ6UXU4 331 aa17.55■□□□□ 0.4
LINC01116-201ENST00000295549 C2orf50Q96LR7 162 aa17.55■□□□□ 0.4
LINC01116-201ENST00000295549 HIPK2Q9H2X6 1198 aa17.55■□□□□ 0.4
LINC01116-201ENST00000295549 GSKIPQ9P0R6 139 aa17.55■□□□□ 0.4
LINC01116-201ENST00000295549 SUB1P53999 127 aaKnown RBP eCLIP17.54■□□□□ 0.4
LINC01116-201ENST00000295549 MFAP2P55001 183 aa17.54■□□□□ 0.4
LINC01116-201ENST00000295549 NSUN5P1Q3KNT7 163 aa17.54■□□□□ 0.4
LINC01116-201ENST00000295549 C4orf3Q8WVX3 66 aa17.54■□□□□ 0.4
LINC01116-201ENST00000295549 THYN1Q9P016 225 aa17.54■□□□□ 0.4
LINC01116-201ENST00000295549 SYNGR2O43760 224 aa17.53■□□□□ 0.4
LINC01116-201ENST00000295549 OR2J3O76001 311 aa17.53■□□□□ 0.4
LINC01116-201ENST00000295549 HTR2BP41595 481 aa17.53■□□□□ 0.4
LINC01116-201ENST00000295549 PVRIGQ6DKI7 326 aa17.53■□□□□ 0.4
LINC01116-201ENST00000295549 SLC25A24Q6NUK1 477 aa17.53■□□□□ 0.4
LINC01116-201ENST00000295549 FBXL7Q9UJT9 491 aa17.53■□□□□ 0.4
LINC01116-201ENST00000295549 U3KQ87 197 aa17.53■□□□□ 0.4
LINC01116-201ENST00000295549 TRRAPQ9Y4A5 3859 aa17.52■□□□□ 0.4
LINC01116-201ENST00000295549 DNHD1Q96M86 4753 aa17.52■□□□□ 0.4
LINC01116-201ENST00000295549 A0A1W2PRX2 142 aa17.52■□□□□ 0.4
LINC01116-201ENST00000295549 GOSR2O14653 212 aa17.52■□□□□ 0.4
LINC01116-201ENST00000295549 LY86O95711 162 aa17.52■□□□□ 0.4
LINC01116-201ENST00000295549 RNASE2P10153 161 aaKnown RBP17.52■□□□□ 0.4
LINC01116-201ENST00000295549 RUNX1Q01196 453 aa17.52■□□□□ 0.4
LINC01116-201ENST00000295549 ATP5G2Q06055 141 aa17.52■□□□□ 0.4
LINC01116-201ENST00000295549 C15orf32Q32M92 178 aa17.52■□□□□ 0.4
LINC01116-201ENST00000295549 C18orf65Q6ZTR6 163 aa17.52■□□□□ 0.4
LINC01116-201ENST00000295549 KLHL30-AS1Q8NEE0 82 aa17.52■□□□□ 0.4
LINC01116-201ENST00000295549 CIB3Q96Q77 187 aaPredicted RBP17.52■□□□□ 0.4
LINC01116-201ENST00000295549 MAGT1Q9H0U3 335 aa17.52■□□□□ 0.4
LINC01116-201ENST00000295549 GNB4Q9HAV0 340 aa17.52■□□□□ 0.4
LINC01116-201ENST00000295549 I3L521 148 aa17.51■□□□□ 0.39
LINC01116-201ENST00000295549 ATP5IP56385 69 aaPredicted RBP17.51■□□□□ 0.39
LINC01116-201ENST00000295549 IL15RAQ13261 267 aa17.51■□□□□ 0.39
LINC01116-201ENST00000295549 NUDT19A8MXV4 375 aa17.5■□□□□ 0.39
LINC01116-201ENST00000295549 NDUFB8O95169 186 aa17.5■□□□□ 0.39
LINC01116-201ENST00000295549 MBPP02686 304 aaPredicted RBP17.5■□□□□ 0.39
LINC01116-201ENST00000295549 POLR2GP62487 172 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC01116-201ENST00000295549 DEFA5Q01523 94 aa17.5■□□□□ 0.39
LINC01116-201ENST00000295549 C2orf83Q53S99 150 aa17.5■□□□□ 0.39
LINC01116-201ENST00000295549 SLC24A4Q8NFF2 622 aa17.5■□□□□ 0.39
LINC01116-201ENST00000295549 M0QZ24 198 aa17.49■□□□□ 0.39
LINC01116-201ENST00000295549 SIX6O95475 246 aa17.49■□□□□ 0.39
LINC01116-201ENST00000295549 IGHV3-11P01762 117 aa17.49■□□□□ 0.39
LINC01116-201ENST00000295549 LGALS1P09382 135 aaKnown RBP17.49■□□□□ 0.39
LINC01116-201ENST00000295549 CYCSP99999 105 aaKnown RBP17.49■□□□□ 0.39
LINC01116-201ENST00000295549 ZNF343Q6P1L6 599 aa17.49■□□□□ 0.39
LINC01116-201ENST00000295549 NOXA1Q86UR1 476 aa17.49■□□□□ 0.39
LINC01116-201ENST00000295549 CXorf58Q96LI9 332 aa17.49■□□□□ 0.39
LINC01116-201ENST00000295549 NMES1Q9C002 83 aa17.49■□□□□ 0.39
LINC01116-201ENST00000295549 WRBO00258 174 aa17.48■□□□□ 0.39
LINC01116-201ENST00000295549 IAPPP10997 89 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms