RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 HSPB1P04792 205 aaKnown RBP14.78□□□□□ -0.04
CDC42EP3-201ENST00000295324 OR8A1Q8NGG7 326 aa14.78□□□□□ -0.04
CDC42EP3-201ENST00000295324 ANOS1P23352 680 aa14.78□□□□□ -0.04
CDC42EP3-201ENST00000295324 SAMD13Q5VXD3 122 aa14.78□□□□□ -0.04
CDC42EP3-201ENST00000295324 WDR25Q64LD2 544 aaPredicted RBP14.78□□□□□ -0.04
CDC42EP3-201ENST00000295324 SRSF12Q8WXF0 261 aaKnown RBP14.78□□□□□ -0.04
CDC42EP3-201ENST00000295324 PSMG3Q9BT73 122 aaPredicted RBP14.78□□□□□ -0.04
CDC42EP3-201ENST00000295324 PAM16Q9Y3D7 125 aa14.78□□□□□ -0.04
CDC42EP3-201ENST00000295324 J3QKU1 62 aa14.78□□□□□ -0.04
CDC42EP3-201ENST00000295324 PRB3Q04118 309 aaPredicted RBP14.78□□□□□ -0.04
CDC42EP3-201ENST00000295324 SAPCD1Q5SSQ6 148 aa14.78□□□□□ -0.04
CDC42EP3-201ENST00000295324 DOPEY2Q9Y3R5 2298 aa14.78□□□□□ -0.04
CDC42EP3-201ENST00000295324 UPK2O00526 184 aa14.77□□□□□ -0.04
CDC42EP3-201ENST00000295324 FAM159AQ6UWV7 190 aa14.77□□□□□ -0.04
CDC42EP3-201ENST00000295324 ZFHX2Q9C0A1 2572 aaPredicted RBP14.77□□□□□ -0.04
CDC42EP3-201ENST00000295324 FAM89BQ8N5H3 189 aa14.77□□□□□ -0.04
CDC42EP3-201ENST00000295324 ITLN2Q8WWU7 325 aaPredicted RBP14.77□□□□□ -0.04
CDC42EP3-201ENST00000295324 BDP1A6H8Y1 2624 aa14.77□□□□□ -0.04
CDC42EP3-201ENST00000295324 PRR32B1ATL7 298 aa14.77□□□□□ -0.05
CDC42EP3-201ENST00000295324 RBFOX2O43251 390 aaKnown RBP eCLIP14.77□□□□□ -0.05
CDC42EP3-201ENST00000295324 CD81P60033 236 aa14.77□□□□□ -0.05
CDC42EP3-201ENST00000295324 CRIM1Q9NZV1 1036 aa14.77□□□□□ -0.05
CDC42EP3-201ENST00000295324 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.77□□□□□ -0.05
CDC42EP3-201ENST00000295324 H3BTX0 84 aa14.77□□□□□ -0.05
CDC42EP3-201ENST00000295324 TCF21O43680 179 aa14.77□□□□□ -0.05
CDC42EP3-201ENST00000295324 H2BFSP57053 126 aa14.77□□□□□ -0.05
CDC42EP3-201ENST00000295324 FAM53AQ6NSI3 398 aaPredicted RBP14.77□□□□□ -0.05
CDC42EP3-201ENST00000295324 VN1R17PQ8TDU5 208 aa14.77□□□□□ -0.05
CDC42EP3-201ENST00000295324 TMEM177Q53S58 311 aa14.77□□□□□ -0.05
CDC42EP3-201ENST00000295324 TEX45Q8NA69 505 aa14.77□□□□□ -0.05
CDC42EP3-201ENST00000295324 TIMM23O14925 209 aa14.76□□□□□ -0.05
CDC42EP3-201ENST00000295324 ZNF250P15622 560 aa14.76□□□□□ -0.05
CDC42EP3-201ENST00000295324 PRR30Q53SZ7 412 aaPredicted RBP14.76□□□□□ -0.05
CDC42EP3-201ENST00000295324 SLC25A28Q96A46 364 aa14.76□□□□□ -0.05
CDC42EP3-201ENST00000295324 RPUSD1Q9UJJ7 312 aaKnown RBP14.76□□□□□ -0.05
CDC42EP3-201ENST00000295324 IL6RP08887 468 aaPredicted RBP14.76□□□□□ -0.05
CDC42EP3-201ENST00000295324 K7ERU9 68 aa14.75□□□□□ -0.05
CDC42EP3-201ENST00000295324 GOLT1AQ6ZVE7 132 aa14.75□□□□□ -0.05
CDC42EP3-201ENST00000295324 KLHDC3Q9BQ90 382 aa14.75□□□□□ -0.05
CDC42EP3-201ENST00000295324 TICRRQ7Z2Z1 1910 aa14.75□□□□□ -0.05
CDC42EP3-201ENST00000295324 OOSP1A8MZH6 123 aa14.75□□□□□ -0.05
CDC42EP3-201ENST00000295324 AMY1AP04745 511 aa14.75□□□□□ -0.05
CDC42EP3-201ENST00000295324 CD69Q07108 199 aa14.75□□□□□ -0.05
CDC42EP3-201ENST00000295324 TCRBV4S1A1TA0A5B7 111 aa14.75□□□□□ -0.05
CDC42EP3-201ENST00000295324 DPRXA6NFQ7 191 aa14.75□□□□□ -0.05
CDC42EP3-201ENST00000295324 M0R3E3 92 aa14.75□□□□□ -0.05
CDC42EP3-201ENST00000295324 HEPN1Q6WQI6 88 aa14.75□□□□□ -0.05
CDC42EP3-201ENST00000295324 ZNF256Q9Y2P7 627 aaPredicted RBP14.75□□□□□ -0.05
CDC42EP3-201ENST00000295324 OR4C46A6NHA9 309 aa14.75□□□□□ -0.05
CDC42EP3-201ENST00000295324 SMUG1Q53HV7 270 aa14.75□□□□□ -0.05
CDC42EP3-201ENST00000295324 C19orf54Q5BKX5 351 aa14.75□□□□□ -0.05
CDC42EP3-201ENST00000295324 J3QRE1 110 aa14.75□□□□□ -0.05
CDC42EP3-201ENST00000295324 TFF1P04155 84 aa14.75□□□□□ -0.05
CDC42EP3-201ENST00000295324 CD24P25063 80 aa14.75□□□□□ -0.05
CDC42EP3-201ENST00000295324 MT-ND6P03923 174 aa14.74□□□□□ -0.05
CDC42EP3-201ENST00000295324 CRYBB3P26998 211 aa14.74□□□□□ -0.05
CDC42EP3-201ENST00000295324 IGHV3-66A0A0C4DH42 116 aa14.74□□□□□ -0.05
CDC42EP3-201ENST00000295324 MINOS1Q5TGZ0 78 aa14.74□□□□□ -0.05
CDC42EP3-201ENST00000295324 MINOS1-NBL1R4GNA1 71 aa14.74□□□□□ -0.05
CDC42EP3-201ENST00000295324 NBEAP1P0C6P0 100 aa14.74□□□□□ -0.05
CDC42EP3-201ENST00000295324 TRGC1P0CF51 173 aa14.74□□□□□ -0.05
CDC42EP3-201ENST00000295324 GCHFRP30047 84 aa14.74□□□□□ -0.05
CDC42EP3-201ENST00000295324 ARTNQ5T4W7 220 aa14.74□□□□□ -0.05
CDC42EP3-201ENST00000295324 LINC00862A6NCI5 91 aa14.74□□□□□ -0.05
CDC42EP3-201ENST00000295324 ZNF660Q6AZW8 331 aaPredicted RBP14.74□□□□□ -0.05
CDC42EP3-201ENST00000295324 PKDREJQ9NTG1 2253 aa14.74□□□□□ -0.05
CDC42EP3-201ENST00000295324 TANC1Q9C0D5 1861 aa14.74□□□□□ -0.05
CDC42EP3-201ENST00000295324 DIRC3C9JPN6 131 aa14.73□□□□□ -0.05
CDC42EP3-201ENST00000295324 GCSHP23434 173 aa14.73□□□□□ -0.05
CDC42EP3-201ENST00000295324 FOXI3A8MTJ6 420 aaPredicted RBP14.73□□□□□ -0.05
CDC42EP3-201ENST00000295324 CKS2P33552 79 aa14.73□□□□□ -0.05
CDC42EP3-201ENST00000295324 ICAM4Q14773 271 aa14.73□□□□□ -0.05
CDC42EP3-201ENST00000295324 RTBDNQ9BSG5 229 aaPredicted RBP14.73□□□□□ -0.05
CDC42EP3-201ENST00000295324 GPX4P36969 197 aaPredicted RBP14.73□□□□□ -0.05
CDC42EP3-201ENST00000295324 ZNF841Q6ZN19 808 aa14.73□□□□□ -0.05
CDC42EP3-201ENST00000295324 RRHO14718 337 aa14.73□□□□□ -0.05
CDC42EP3-201ENST00000295324 TBX15Q96SF7 602 aa14.73□□□□□ -0.05
CDC42EP3-201ENST00000295324 ZFP30Q9Y2G7 519 aa14.73□□□□□ -0.05
CDC42EP3-201ENST00000295324 MOB4Q9Y3A3 225 aa14.73□□□□□ -0.05
CDC42EP3-201ENST00000295324 FBLL1A6NHQ2 334 aaKnown RBP14.73□□□□□ -0.05
CDC42EP3-201ENST00000295324 TCF15Q12870 199 aa14.73□□□□□ -0.05
CDC42EP3-201ENST00000295324 COL5A1-AS1Q5SY13 56 aa14.73□□□□□ -0.05
CDC42EP3-201ENST00000295324 IGHV2-26A0A0B4J1V2 119 aa14.72□□□□□ -0.05
CDC42EP3-201ENST00000295324 NHLRC3Q5JS37 347 aa14.72□□□□□ -0.05
CDC42EP3-201ENST00000295324 NPCDR1Q9BY65 106 aa14.72□□□□□ -0.05
CDC42EP3-201ENST00000295324 FREM3P0C091 2139 aa14.72□□□□□ -0.05
CDC42EP3-201ENST00000295324 NDUFS8O00217 210 aa14.72□□□□□ -0.05
CDC42EP3-201ENST00000295324 GCGP01275 180 aa14.72□□□□□ -0.05
CDC42EP3-201ENST00000295324 OR9G9P0C7N8 305 aa14.72□□□□□ -0.05
CDC42EP3-201ENST00000295324 ZP1P60852 638 aa14.72□□□□□ -0.05
CDC42EP3-201ENST00000295324 ADIPOQQ15848 244 aa14.72□□□□□ -0.05
CDC42EP3-201ENST00000295324 HIST1H2BAQ96A08 127 aa14.72□□□□□ -0.05
CDC42EP3-201ENST00000295324 CD8AP01732 235 aa14.72□□□□□ -0.05
CDC42EP3-201ENST00000295324 VMO1Q7Z5L0 202 aa14.72□□□□□ -0.05
CDC42EP3-201ENST00000295324 CDC42EP3Q9UKI2 254 aa14.72□□□□□ -0.05
CDC42EP3-201ENST00000295324 IGKV1-12A0A0C4DH73 117 aa14.72□□□□□ -0.05
CDC42EP3-201ENST00000295324 IGKV1D-12P01611 117 aa14.72□□□□□ -0.05
CDC42EP3-201ENST00000295324 IGHV1-8P0DP01 117 aa14.72□□□□□ -0.05
CDC42EP3-201ENST00000295324 IGFBP2P18065 325 aa14.72□□□□□ -0.05
CDC42EP3-201ENST00000295324 C15orf61A6NNL5 157 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms