RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 VSTM2AQ8TAG5 236 aa12□□□□□ -0.49
CCDC140-201ENST00000295226 SMIM8Q96KF7 97 aa12□□□□□ -0.49
CCDC140-201ENST00000295226 ZNF705EA8MWA4 302 aaPredicted RBP11.99□□□□□ -0.49
CCDC140-201ENST00000295226 APELAP0DMC3 54 aa11.99□□□□□ -0.49
CCDC140-201ENST00000295226 RAB5CP51148 216 aa11.99□□□□□ -0.49
CCDC140-201ENST00000295226 RPL8P62917 257 aaKnown RBP11.99□□□□□ -0.49
CCDC140-201ENST00000295226 CX3CL1P78423 397 aa11.99□□□□□ -0.49
CCDC140-201ENST00000295226 NDPQ00604 133 aa11.99□□□□□ -0.49
CCDC140-201ENST00000295226 BAXQ07812 192 aa11.99□□□□□ -0.49
CCDC140-201ENST00000295226 C16orf82Q7Z2V1 217 aa11.99□□□□□ -0.49
CCDC140-201ENST00000295226 OR2C3Q8N628 320 aa11.99□□□□□ -0.49
CCDC140-201ENST00000295226 OR1S2Q8NGQ3 325 aa11.99□□□□□ -0.49
CCDC140-201ENST00000295226 FAM103A1Q9BTL3 118 aaKnown RBP11.99□□□□□ -0.49
CCDC140-201ENST00000295226 C11orf1Q9H5F2 150 aa11.99□□□□□ -0.49
CCDC140-201ENST00000295226 IGHV7-81A0A0B4J1V7 117 aa11.98□□□□□ -0.49
CCDC140-201ENST00000295226 CLDN34H7C241 214 aa11.98□□□□□ -0.49
CCDC140-201ENST00000295226 WRBO00258 174 aa11.98□□□□□ -0.49
CCDC140-201ENST00000295226 CNIH1O95406 144 aa11.98□□□□□ -0.49
CCDC140-201ENST00000295226 ZNF266Q14584 549 aa11.98□□□□□ -0.49
CCDC140-201ENST00000295226 OR4A5Q8NH83 315 aa11.98□□□□□ -0.49
CCDC140-201ENST00000295226 SUN5Q8TC36 379 aa11.98□□□□□ -0.49
CCDC140-201ENST00000295226 GINS3Q9BRX5 216 aa11.98□□□□□ -0.49
CCDC140-201ENST00000295226 PARP11Q9NR21 331 aa11.98□□□□□ -0.49
CCDC140-201ENST00000295226 LYRM2Q9NU23 88 aaPredicted RBP11.98□□□□□ -0.49
CCDC140-201ENST00000295226 LINC00527Q9UJ94 153 aa11.98□□□□□ -0.49
CCDC140-201ENST00000295226 OR51B2Q9Y5P1 312 aa11.98□□□□□ -0.49
CCDC140-201ENST00000295226 TEX50A0A1B0GTY4 177 aa11.97□□□□□ -0.49
CCDC140-201ENST00000295226 A0A1B0GW64 132 aa11.97□□□□□ -0.49
CCDC140-201ENST00000295226 RNASE1P07998 156 aaKnown RBP11.97□□□□□ -0.49
CCDC140-201ENST00000295226 FXYD3Q14802 87 aa11.97□□□□□ -0.49
CCDC140-201ENST00000295226 TMEM95Q3KNT9 176 aa11.97□□□□□ -0.49
CCDC140-201ENST00000295226 CXorf66Q5JRM2 361 aaPredicted RBP11.97□□□□□ -0.49
CCDC140-201ENST00000295226 MMD2Q8IY49 270 aa11.97□□□□□ -0.49
CCDC140-201ENST00000295226 HINT2Q9BX68 163 aa11.97□□□□□ -0.49
CCDC140-201ENST00000295226 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.97□□□□□ -0.49
CCDC140-201ENST00000295226 TMEM14BQ9NUH8 114 aa11.97□□□□□ -0.49
CCDC140-201ENST00000295226 FBXO7Q9Y3I1 522 aa11.97□□□□□ -0.49
CCDC140-201ENST00000295226 CGB1A6NKQ9 187 aa11.97□□□□□ -0.49
CCDC140-201ENST00000295226 C15orf61A6NNL5 157 aa11.97□□□□□ -0.49
CCDC140-201ENST00000295226 TRIM77I1YAP6 450 aa11.97□□□□□ -0.49
CCDC140-201ENST00000295226 M0QZK8 103 aa11.97□□□□□ -0.49
CCDC140-201ENST00000295226 PITX3O75364 302 aa11.97□□□□□ -0.49
CCDC140-201ENST00000295226 ACTL6BO94805 426 aa11.97□□□□□ -0.49
CCDC140-201ENST00000295226 HLA-DRB1P01911 266 aa11.97□□□□□ -0.49
CCDC140-201ENST00000295226 ABHD5Q8WTS1 349 aa11.97□□□□□ -0.49
CCDC140-201ENST00000295226 JMJD8Q96S16 334 aa11.97□□□□□ -0.49
CCDC140-201ENST00000295226 RAB40CQ96S21 281 aa11.97□□□□□ -0.49
CCDC140-201ENST00000295226 EGR2P11161 476 aaPredicted RBP11.96□□□□□ -0.5
CCDC140-201ENST00000295226 COMPP49747 757 aaPredicted RBP11.96□□□□□ -0.5
CCDC140-201ENST00000295226 EWSR1Q01844 656 aaKnown RBP eCLIP11.96□□□□□ -0.5
CCDC140-201ENST00000295226 ZNF562Q6V9R5 426 aa11.96□□□□□ -0.5
CCDC140-201ENST00000295226 COMMD1Q8N668 190 aa11.96□□□□□ -0.5
CCDC140-201ENST00000295226 OR10W1Q8NGF6 305 aa11.96□□□□□ -0.5
CCDC140-201ENST00000295226 COMMD5Q9GZQ3 224 aa11.96□□□□□ -0.5
CCDC140-201ENST00000295226 NPFFR1Q9GZQ6 430 aa11.96□□□□□ -0.5
CCDC140-201ENST00000295226 MAGT1Q9H0U3 335 aa11.96□□□□□ -0.5
CCDC140-201ENST00000295226 ZNF702PQ9H963 129 aa11.96□□□□□ -0.5
CCDC140-201ENST00000295226 PRNDQ9UKY0 176 aa11.96□□□□□ -0.5
CCDC140-201ENST00000295226 FOXA2Q9Y261 457 aaPredicted RBP11.96□□□□□ -0.5
CCDC140-201ENST00000295226 STRAPQ9Y3F4 350 aaKnown RBP11.96□□□□□ -0.5
CCDC140-201ENST00000295226 FAM90A26D6RGX4 464 aa11.95□□□□□ -0.5
CCDC140-201ENST00000295226 MED6O75586 246 aa11.95□□□□□ -0.5
CCDC140-201ENST00000295226 IFNA17P01571 189 aa11.95□□□□□ -0.5
CCDC140-201ENST00000295226 SPP1P10451 314 aa11.95□□□□□ -0.5
CCDC140-201ENST00000295226 CAV2P51636 162 aa11.95□□□□□ -0.5
CCDC140-201ENST00000295226 POLR2GP62487 172 aaKnown RBP eCLIP11.95□□□□□ -0.5
CCDC140-201ENST00000295226 RPL23AP62750 156 aaKnown RBP11.95□□□□□ -0.5
CCDC140-201ENST00000295226 SRSF12Q8WXF0 261 aaKnown RBP11.95□□□□□ -0.5
CCDC140-201ENST00000295226 NOL4LQ96MY1 436 aaPredicted RBP11.95□□□□□ -0.5
CCDC140-201ENST00000295226 SMIM3Q9BZL3 60 aa11.95□□□□□ -0.5
CCDC140-201ENST00000295226 COA4Q9NYJ1 87 aa11.95□□□□□ -0.5
CCDC140-201ENST00000295226 WSB1Q9Y6I7 421 aa11.95□□□□□ -0.5
CCDC140-201ENST00000295226 C2CD3Q4AC94 2353 aa11.95□□□□□ -0.5
CCDC140-201ENST00000295226 ATP6V0E1O15342 81 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 SSSCA1O60232 199 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 CRYBA1P05813 215 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 RPL27AP46776 148 aaKnown RBP11.94□□□□□ -0.5
CCDC140-201ENST00000295226 PXDC1Q5TGL8 231 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 Q6ZSV7 163 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 TMEM252Q8N6L7 170 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 BPIFCQ8NFQ6 507 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 ARPC1AQ92747 370 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 PRSS22Q9GZN4 317 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 TMEM218A2RU14 115 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 G3V318 75 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 IGHG2P01859 326 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 TAS2R30P59541 319 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 HSPE1P61604 102 aaKnown RBP11.94□□□□□ -0.5
CCDC140-201ENST00000295226 ARSJQ5FYB0 599 aaPredicted RBP11.94□□□□□ -0.5
CCDC140-201ENST00000295226 C19orf35Q6ZS72 473 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 SLC35E3Q7Z769 313 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 ZNF429Q86V71 674 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 PRIMA1Q86XR5 153 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 LFNGQ8NES3 379 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 OR1L8Q8NGR8 309 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 LYPD6BQ8NI32 183 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 FKBP11Q9NYL4 201 aa11.94□□□□□ -0.5
CCDC140-201ENST00000295226 TEX22C9J3V5 150 aa11.93□□□□□ -0.5
CCDC140-201ENST00000295226 UMAD1C9J7I0 102 aa11.93□□□□□ -0.5
CCDC140-201ENST00000295226 FBXO24O75426 580 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms