RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 ZNF318Q5VUA4 2279 aa11□□□□□ -0.65
KCNIP3-201ENST00000295225 DUXBA0A1W2PPF3 345 aa11□□□□□ -0.65
KCNIP3-201ENST00000295225 LRRC30A6NM36 301 aa11□□□□□ -0.65
KCNIP3-201ENST00000295225 RBFOX2O43251 390 aaKnown RBP eCLIP11□□□□□ -0.65
KCNIP3-201ENST00000295225 PROP1O75360 226 aa11□□□□□ -0.65
KCNIP3-201ENST00000295225 C1QTNF9P0C862 333 aa11□□□□□ -0.65
KCNIP3-201ENST00000295225 GALR1P47211 349 aa11□□□□□ -0.65
KCNIP3-201ENST00000295225 C1orf229Q6ZS94 237 aaPredicted RBP11□□□□□ -0.65
KCNIP3-201ENST00000295225 H2BFWTQ7Z2G1 175 aa11□□□□□ -0.65
KCNIP3-201ENST00000295225 IL22RA2Q969J5 263 aa11□□□□□ -0.65
KCNIP3-201ENST00000295225 OR6C3Q9NZP0 311 aa11□□□□□ -0.65
KCNIP3-201ENST00000295225 JPT1Q9UK76 154 aa11□□□□□ -0.65
KCNIP3-201ENST00000295225 PSG8Q9UQ74 426 aa11□□□□□ -0.65
KCNIP3-201ENST00000295225 RNPS1Q15287 305 aaKnown RBP11□□□□□ -0.65
KCNIP3-201ENST00000295225 MRGPRGQ86SM5 289 aa11□□□□□ -0.65
KCNIP3-201ENST00000295225 NPCDR1Q9BY65 106 aa11□□□□□ -0.65
KCNIP3-201ENST00000295225 RRHO14718 337 aa10.99□□□□□ -0.65
KCNIP3-201ENST00000295225 OR4A8P0C604 315 aa10.99□□□□□ -0.65
KCNIP3-201ENST00000295225 FRMD6-AS1P0C7T7 363 aa10.99□□□□□ -0.65
KCNIP3-201ENST00000295225 NRN1LQ496H8 165 aa10.99□□□□□ -0.65
KCNIP3-201ENST00000295225 RNF152Q8N8N0 203 aa10.99□□□□□ -0.65
KCNIP3-201ENST00000295225 DEFB108BQ8NET1 73 aa10.99□□□□□ -0.65
KCNIP3-201ENST00000295225 OR10P1Q8NGE3 313 aa10.99□□□□□ -0.65
KCNIP3-201ENST00000295225 OR1N2Q8NGR9 330 aa10.99□□□□□ -0.65
KCNIP3-201ENST00000295225 LSM10Q969L4 123 aaKnown RBP10.99□□□□□ -0.65
KCNIP3-201ENST00000295225 SIGMAR1Q99720 223 aa10.99□□□□□ -0.65
KCNIP3-201ENST00000295225 SPINK4O60575 86 aa10.99□□□□□ -0.65
KCNIP3-201ENST00000295225 NDUFB4O95168 129 aa10.99□□□□□ -0.65
KCNIP3-201ENST00000295225 MSMPQ1L6U9 139 aa10.99□□□□□ -0.65
KCNIP3-201ENST00000295225 TMEM14EPQ6UXP3 125 aa10.99□□□□□ -0.65
KCNIP3-201ENST00000295225 TGIF2LYQ8IUE0 185 aa10.99□□□□□ -0.65
KCNIP3-201ENST00000295225 ZNF645Q8N7E2 425 aa10.99□□□□□ -0.65
KCNIP3-201ENST00000295225 MBD3L1Q8WWY6 194 aa10.99□□□□□ -0.65
KCNIP3-201ENST00000295225 H7BYZ3 331 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 FAM78BQ5VT40 261 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 ERASQ7Z444 233 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 CD177Q8N6Q3 437 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 SNRNP40Q96DI7 357 aaKnown RBP10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 SMDT1Q9H4I9 107 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 MBNL3Q9NUK0 354 aaKnown RBP10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 POLDIP2Q9Y2S7 368 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 ZFHX3Q15911 3703 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 DSCAMO60469 2012 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 SLC25A6P12236 298 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 WT1P19544 449 aaPredicted RBP10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 PSMB3P49720 205 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 ZNF134P52741 427 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 WDR82Q6UXN9 313 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 MOB3BQ86TA1 216 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 RPRMLQ8N4K4 120 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 MDS2Q8NDY4 140 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 FDCSPQ8NFU4 85 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 Q8TCH9 128 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 PERPQ96FX8 193 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 GNG12Q9UBI6 72 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 COL27A1Q8IZC6 1860 aaPredicted RBP10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 TMEM30CPA0ZSE6 113 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 PMS2P5A8MQ11 134 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 C11orf94C9JXX5 98 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 GYPAP02724 150 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 ZNF146Q15072 292 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 MIC13Q5XKP0 118 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 OR8G5Q8NG78 346 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 LOXL4Q96JB6 756 aa10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 KLF13Q9Y2Y9 288 aaPredicted RBP10.98□□□□□ -0.65
KCNIP3-201ENST00000295225 NAV3Q8IVL0 2385 aa10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 GRIFINA4D1Z8 144 aa10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 NUPR1O60356 82 aa10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 PRB4P10163 310 aaPredicted RBP10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 SPATA31B1PQ5VZV4 182 aa10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 C9orf106Q8NAJ2 232 aa10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 LRRC29Q8WV35 223 aa10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 C20orf144Q9BQM9 153 aa10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 TRBV6-6A0A0A6YYG2 114 aa10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 TRAV1-1A0A0B4J248 108 aa10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 ZNF891A8MT65 544 aaPredicted RBP10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 ACTL6BO94805 426 aa10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 PFN1P07737 140 aaKnown RBP10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 CECR9P0C854 216 aa10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 SMAGPQ0VAQ4 97 aa10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 NIT1Q86X76 327 aa10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 IMMP2LQ96T52 175 aa10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 NAT8Q9UHE5 227 aa10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 CEP295Q9C0D2 2601 aa10.97□□□□□ -0.65
KCNIP3-201ENST00000295225 M0R1X1 148 aa10.96□□□□□ -0.65
KCNIP3-201ENST00000295225 GATA2P23769 480 aaPredicted RBP10.96□□□□□ -0.65
KCNIP3-201ENST00000295225 SERF2P84101 59 aa10.96□□□□□ -0.65
KCNIP3-201ENST00000295225 GABRA6Q16445 453 aa10.96□□□□□ -0.65
KCNIP3-201ENST00000295225 ZNF709Q8N972 641 aa10.96□□□□□ -0.65
KCNIP3-201ENST00000295225 PPP5D1E7EU14 171 aa10.96□□□□□ -0.66
KCNIP3-201ENST00000295225 FOXH1O75593 365 aa10.96□□□□□ -0.66
KCNIP3-201ENST00000295225 KBTBD11O94819 623 aa10.96□□□□□ -0.66
KCNIP3-201ENST00000295225 PLP1P60201 277 aa10.96□□□□□ -0.66
KCNIP3-201ENST00000295225 ACP7Q6ZNF0 438 aa10.96□□□□□ -0.66
KCNIP3-201ENST00000295225 OR8I2Q8N0Y5 310 aa10.96□□□□□ -0.66
KCNIP3-201ENST00000295225 TMEM256Q8N2U0 113 aa10.96□□□□□ -0.66
KCNIP3-201ENST00000295225 PSMG3Q9BT73 122 aaPredicted RBP10.96□□□□□ -0.66
KCNIP3-201ENST00000295225 WIPI2Q9Y4P8 454 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms