RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 POLR3KQ9Y2Y1 108 aaPredicted RBP7.38□□□□□ -1.23
PDPN-201ENST00000294489 LSM4Q9Y4Z0 139 aaKnown RBP7.38□□□□□ -1.23
PDPN-201ENST00000294489 PXMP4Q9Y6I8 212 aa7.38□□□□□ -1.23
PDPN-201ENST00000294489 COX7A1P24310 79 aa7.38□□□□□ -1.23
PDPN-201ENST00000294489 TMEM95Q3KNT9 176 aa7.38□□□□□ -1.23
PDPN-201ENST00000294489 RPEQ96AT9 228 aa7.38□□□□□ -1.23
PDPN-201ENST00000294489 SEC14L6B5MCN3 397 aa7.38□□□□□ -1.23
PDPN-201ENST00000294489 INS-IGF2F8WCM5 200 aa7.38□□□□□ -1.23
PDPN-201ENST00000294489 SLC25A17O43808 307 aa7.38□□□□□ -1.23
PDPN-201ENST00000294489 EIF3GO75821 320 aaKnown RBP eCLIP7.38□□□□□ -1.23
PDPN-201ENST00000294489 IGLV2-23P01705 113 aa7.38□□□□□ -1.23
PDPN-201ENST00000294489 AKR1C3P42330 323 aa7.38□□□□□ -1.23
PDPN-201ENST00000294489 HCP5Q6MZN7 132 aa7.38□□□□□ -1.23
PDPN-201ENST00000294489 SLC35E3Q7Z769 313 aa7.38□□□□□ -1.23
PDPN-201ENST00000294489 MOB3BQ86TA1 216 aa7.38□□□□□ -1.23
PDPN-201ENST00000294489 TVP23CQ96ET8 276 aa7.38□□□□□ -1.23
PDPN-201ENST00000294489 LOC105371242A0A075B767 164 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 IGHV3-72A0A0B4J1Y9 119 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 IGHV4-39P01824 125 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 SUB1P53999 127 aaKnown RBP eCLIP7.37□□□□□ -1.23
PDPN-201ENST00000294489 MEF2BQ02080 365 aaPredicted RBP7.37□□□□□ -1.23
PDPN-201ENST00000294489 BSXQ3C1V8 233 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 MIC13Q5XKP0 118 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 MRPL41Q8IXM3 137 aaKnown RBP7.37□□□□□ -1.23
PDPN-201ENST00000294489 C15orf54Q8N8G6 183 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 TEX45Q8NA69 505 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 OR10W1Q8NGF6 305 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 TUBA4BQ9H853 241 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 ZNF430Q9H8G1 570 aaPredicted RBP7.37□□□□□ -1.23
PDPN-201ENST00000294489 MALRD1Q5VYJ5 2156 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 IGHV1-3A0A0C4DH29 117 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 ODF3BA8MYP8 253 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 VWC2LB2RUY7 222 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 ACTL6BO94805 426 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 RNASE2P10153 161 aaKnown RBP7.37□□□□□ -1.23
PDPN-201ENST00000294489 PAX6P26367 422 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 RPL29P47914 159 aaKnown RBP7.37□□□□□ -1.23
PDPN-201ENST00000294489 DLX1P56177 255 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 LMO4P61968 165 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 PNKDQ8N490 385 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 OR4P4Q8NGL7 312 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 SSMEM1Q8WWF3 244 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 TMPRSS5Q9H3S3 457 aa7.37□□□□□ -1.23
PDPN-201ENST00000294489 ARF6P62330 175 aa7.36□□□□□ -1.23
PDPN-201ENST00000294489 PRB3Q04118 309 aaPredicted RBP7.36□□□□□ -1.23
PDPN-201ENST00000294489 TMEM249Q2WGJ8 235 aa7.36□□□□□ -1.23
PDPN-201ENST00000294489 GCSAMLQ5JQS6 135 aa7.36□□□□□ -1.23
PDPN-201ENST00000294489 TMEM144Q7Z5S9 345 aa7.36□□□□□ -1.23
PDPN-201ENST00000294489 YIF1AO95070 293 aa7.36□□□□□ -1.23
PDPN-201ENST00000294489 CTRB1P17538 263 aa7.36□□□□□ -1.23
PDPN-201ENST00000294489 PRTN3P24158 256 aa7.36□□□□□ -1.23
PDPN-201ENST00000294489 ZFP36P26651 326 aaKnown RBP7.36□□□□□ -1.23
PDPN-201ENST00000294489 PNRC1Q12796 327 aaPredicted RBP7.36□□□□□ -1.23
PDPN-201ENST00000294489 FAM90A2PQ658T7 463 aa7.36□□□□□ -1.23
PDPN-201ENST00000294489 CTRB2Q6GPI1 263 aa7.36□□□□□ -1.23
PDPN-201ENST00000294489 MMD2Q8IY49 270 aa7.36□□□□□ -1.23
PDPN-201ENST00000294489 STPG3Q8N7X2 389 aa7.36□□□□□ -1.23
PDPN-201ENST00000294489 CACNG8Q8WXS5 425 aa7.36□□□□□ -1.23
PDPN-201ENST00000294489 A6NJY4 79 aa7.36□□□□□ -1.23
PDPN-201ENST00000294489 NDUFS6O75380 124 aaKnown RBP7.36□□□□□ -1.23
PDPN-201ENST00000294489 DEFA4P12838 97 aa7.36□□□□□ -1.23
PDPN-201ENST00000294489 HABP2Q14520 560 aaPredicted RBP7.36□□□□□ -1.23
PDPN-201ENST00000294489 MRGPRG-AS1Q2M3A8 158 aa7.36□□□□□ -1.23
PDPN-201ENST00000294489 NANPQ8TBE9 248 aa7.36□□□□□ -1.23
PDPN-201ENST00000294489 C1orf159Q96HA4 380 aa7.36□□□□□ -1.23
PDPN-201ENST00000294489 MLXQ9UH92 298 aa7.36□□□□□ -1.23
PDPN-201ENST00000294489 DOPEY1Q5JWR5 2465 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 COLCA2A8K830 154 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 TMEM250H0YL14 139 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 CRYGBP07316 175 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 HTR1DP28221 377 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 GPX4P36969 197 aaPredicted RBP7.35□□□□□ -1.23
PDPN-201ENST00000294489 CEACAM3P40198 252 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 PDLIM4P50479 330 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 CD81P60033 236 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 RHOBP62745 196 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 CD69Q07108 199 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 ZNF124Q15973 351 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 RNASEH2CQ8TDP1 164 aaKnown RBP7.35□□□□□ -1.23
PDPN-201ENST00000294489 RITA1Q96K30 269 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 SLC35E1Q96K37 410 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 SIRPDQ9H106 197 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 SIRT7Q9NRC8 400 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 ZNF727A8MUV8 499 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 B4DEV8 164 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 E7EUB6 86 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 NDUFS8O00217 210 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 MT-CO2P00403 227 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 GAMTQ14353 236 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 PRSS8Q16651 343 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 C10orf55Q5SWW7 151 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 OR4F5Q8NH21 305 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 OR4F4Q96R69 305 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 CCL19Q99731 98 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 RNF5Q99942 180 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 DPM3Q9P2X0 92 aa7.35□□□□□ -1.23
PDPN-201ENST00000294489 KMT2BQ9UMN6 2715 aaPredicted RBP7.35□□□□□ -1.23
PDPN-201ENST00000294489 SPTBN1Q01082 2364 aaKnown RBP7.35□□□□□ -1.23
PDPN-201ENST00000294489 A0A087WWC5 75 aa7.34□□□□□ -1.23
PDPN-201ENST00000294489 IGHV2-70DA0A0C4DH43 119 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms