RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 PFN1P07737 140 aaKnown RBP12.89□□□□□ -0.35
NCKIPSD-201ENST00000294129 LYNX1P0DP58 116 aa12.89□□□□□ -0.35
NCKIPSD-201ENST00000294129 C10orf55Q5SWW7 151 aa12.89□□□□□ -0.35
NCKIPSD-201ENST00000294129 PRNDQ9UKY0 176 aa12.89□□□□□ -0.35
NCKIPSD-201ENST00000294129 YTHDF2Q9Y5A9 579 aaKnown RBP12.89□□□□□ -0.35
NCKIPSD-201ENST00000294129 NCOR2Q9Y618 2525 aa12.89□□□□□ -0.35
NCKIPSD-201ENST00000294129 CHD8Q9HCK8 2581 aa12.89□□□□□ -0.35
NCKIPSD-201ENST00000294129 TRBV24-1A0A075B6N3 115 aa12.88□□□□□ -0.35
NCKIPSD-201ENST00000294129 TMEM178BH3BS89 294 aa12.88□□□□□ -0.35
NCKIPSD-201ENST00000294129 UPK2O00526 184 aa12.88□□□□□ -0.35
NCKIPSD-201ENST00000294129 RAB31Q13636 194 aa12.88□□□□□ -0.35
NCKIPSD-201ENST00000294129 TBR1Q16650 682 aa12.88□□□□□ -0.35
NCKIPSD-201ENST00000294129 OR4X1Q8NH49 305 aa12.88□□□□□ -0.35
NCKIPSD-201ENST00000294129 HIST1H2BLQ99880 126 aa12.88□□□□□ -0.35
NCKIPSD-201ENST00000294129 TMEM106BQ9NUM4 274 aa12.88□□□□□ -0.35
NCKIPSD-201ENST00000294129 ELOVL5Q9NYP7 299 aa12.88□□□□□ -0.35
NCKIPSD-201ENST00000294129 LSM4Q9Y4Z0 139 aaKnown RBP12.88□□□□□ -0.35
NCKIPSD-201ENST00000294129 TEX50A0A1B0GTY4 177 aa12.88□□□□□ -0.35
NCKIPSD-201ENST00000294129 CXorf1O96002 111 aa12.88□□□□□ -0.35
NCKIPSD-201ENST00000294129 STAG3L2P0CL84 134 aa12.88□□□□□ -0.35
NCKIPSD-201ENST00000294129 STAG3L3P0CL85 134 aa12.88□□□□□ -0.35
NCKIPSD-201ENST00000294129 MIR17HGQ75NE6 70 aa12.88□□□□□ -0.35
NCKIPSD-201ENST00000294129 A0A1B0GV90 55 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 NDUFB3O43676 98 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 APOA2P02652 100 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 APELAP0DMC3 54 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 LINC01551Q86U37 167 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 TMEM37Q8WXS4 190 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 ACY3Q96HD9 319 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 ARHGAP32A7KAX9 2087 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 DVL1O14640 695 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 PDE6DO43924 150 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 RNASE6Q93091 150 aaKnown RBP12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 COMMD5Q9GZQ3 224 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 NCOR1P1Q9H4R4 102 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 CTSZQ9UBR2 303 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 TRBV20OR9-2A0A075B6H5 130 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 E7EUB6 86 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 PLAUP00749 431 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 RNF224P0DH78 156 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 GCHFRP30047 84 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 TMPRSS3P57727 454 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 PRCDQ00LT1 54 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 PRSS8Q16651 343 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 OR9G1Q8NH87 305 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 CORO2AQ92828 525 aa12.87□□□□□ -0.35
NCKIPSD-201ENST00000294129 WNK2Q9Y3S1 2297 aa12.86□□□□□ -0.35
NCKIPSD-201ENST00000294129 IGKV1OR2-108A0A075B7D4 117 aa12.86□□□□□ -0.35
NCKIPSD-201ENST00000294129 FAM90A27PA6NNH2 459 aa12.86□□□□□ -0.35
NCKIPSD-201ENST00000294129 E7EQL1 145 aa12.86□□□□□ -0.35
NCKIPSD-201ENST00000294129 PHOX2AO14813 284 aa12.86□□□□□ -0.35
NCKIPSD-201ENST00000294129 ENSAO43768 121 aaKnown RBP12.86□□□□□ -0.35
NCKIPSD-201ENST00000294129 SNRPCP09234 159 aaKnown RBP12.86□□□□□ -0.35
NCKIPSD-201ENST00000294129 OR10J1P30954 320 aa12.86□□□□□ -0.35
NCKIPSD-201ENST00000294129 RHOBP62745 196 aa12.86□□□□□ -0.35
NCKIPSD-201ENST00000294129 LRRC10Q5BKY1 277 aa12.86□□□□□ -0.35
NCKIPSD-201ENST00000294129 LINC01560Q8TB33 94 aa12.86□□□□□ -0.35
NCKIPSD-201ENST00000294129 KCNIP2Q9NS61 270 aa12.86□□□□□ -0.35
NCKIPSD-201ENST00000294129 FUT9Q9Y231 359 aa12.86□□□□□ -0.35
NCKIPSD-201ENST00000294129 A0A087X0M5 115 aa12.86□□□□□ -0.35
NCKIPSD-201ENST00000294129 A0A1B0GX30 115 aa12.86□□□□□ -0.35
NCKIPSD-201ENST00000294129 OR10J4P0C629 311 aa12.86□□□□□ -0.35
NCKIPSD-201ENST00000294129 DDTP30046 118 aa12.86□□□□□ -0.35
NCKIPSD-201ENST00000294129 RAB1CQ92928 201 aa12.86□□□□□ -0.35
NCKIPSD-201ENST00000294129 CSMD1Q96PZ7 3565 aa12.86□□□□□ -0.35
NCKIPSD-201ENST00000294129 REG1AP05451 166 aa12.85□□□□□ -0.35
NCKIPSD-201ENST00000294129 OR2T10Q8NGZ9 312 aa12.85□□□□□ -0.35
NCKIPSD-201ENST00000294129 F6UZH7 168 aa12.85□□□□□ -0.35
NCKIPSD-201ENST00000294129 TSTD3H0UI37 97 aa12.85□□□□□ -0.35
NCKIPSD-201ENST00000294129 H0YJW9 148 aa12.85□□□□□ -0.35
NCKIPSD-201ENST00000294129 OR7C2O60412 319 aa12.85□□□□□ -0.35
NCKIPSD-201ENST00000294129 PSG5Q15238 335 aa12.85□□□□□ -0.35
NCKIPSD-201ENST00000294129 OR2T6Q8NHC8 308 aa12.85□□□□□ -0.35
NCKIPSD-201ENST00000294129 FLYWCH2Q96CP2 140 aaKnown RBP12.85□□□□□ -0.35
NCKIPSD-201ENST00000294129 PITPNC1Q9UKF7 332 aa12.85□□□□□ -0.35
NCKIPSD-201ENST00000294129 PKIAP61925 76 aa12.84□□□□□ -0.35
NCKIPSD-201ENST00000294129 NABP2Q9BQ15 211 aa12.84□□□□□ -0.35
NCKIPSD-201ENST00000294129 SRD5A3Q9H8P0 318 aa12.84□□□□□ -0.35
NCKIPSD-201ENST00000294129 VSTM5A8MXK1 200 aa12.84□□□□□ -0.35
NCKIPSD-201ENST00000294129 ZNF833PQ6ZTB9 187 aa12.84□□□□□ -0.35
NCKIPSD-201ENST00000294129 SHISA9B4DS77 424 aa12.84□□□□□ -0.35
NCKIPSD-201ENST00000294129 GRNP28799 593 aaKnown RBP12.84□□□□□ -0.35
NCKIPSD-201ENST00000294129 RPL8P62917 257 aaKnown RBP12.84□□□□□ -0.35
NCKIPSD-201ENST00000294129 ANAPC16Q96DE5 110 aa12.84□□□□□ -0.35
NCKIPSD-201ENST00000294129 LINC00574Q9H8X3 128 aa12.84□□□□□ -0.35
NCKIPSD-201ENST00000294129 TPSG1Q9NRR2 321 aa12.84□□□□□ -0.35
NCKIPSD-201ENST00000294129 MDFIC2A0A1B0GVS7 189 aa12.83□□□□□ -0.36
NCKIPSD-201ENST00000294129 ZNF320A2RRD8 509 aa12.83□□□□□ -0.36
NCKIPSD-201ENST00000294129 SLC25A17O43808 307 aa12.83□□□□□ -0.36
NCKIPSD-201ENST00000294129 POU2AF1Q16633 256 aa12.83□□□□□ -0.36
NCKIPSD-201ENST00000294129 RITA1Q96K30 269 aa12.83□□□□□ -0.36
NCKIPSD-201ENST00000294129 SPTAN1Q13813 2472 aaKnown RBP12.83□□□□□ -0.36
NCKIPSD-201ENST00000294129 ASH1LQ9NR48 2969 aaKnown RBP12.83□□□□□ -0.36
NCKIPSD-201ENST00000294129 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.83□□□□□ -0.36
NCKIPSD-201ENST00000294129 XKRY2A2RUG3 117 aa12.83□□□□□ -0.36
NCKIPSD-201ENST00000294129 VENTXO95231 258 aa12.83□□□□□ -0.36
NCKIPSD-201ENST00000294129 RPL29P47914 159 aaKnown RBP12.83□□□□□ -0.36
NCKIPSD-201ENST00000294129 MEF2CQ06413 473 aaPredicted RBP12.83□□□□□ -0.36
NCKIPSD-201ENST00000294129 OCC1Q8TAD7 63 aa12.83□□□□□ -0.36
NCKIPSD-201ENST00000294129 LINC00869P0C866 280 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms