RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 CLEC5AQ9NY25 188 aa9.57□□□□□ -0.88
NPC1L1-201ENST00000289547 C8orf88P0DMB2 117 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 KIR2DL2P43627 348 aaPredicted RBP9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 OR51B2Q9Y5P1 312 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 C7orf71A4D174 169 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 NAPSAO96009 420 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 TNXAQ16473 311 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 SP5Q6BEB4 398 aaPredicted RBP9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 ABHD12Q8N2K0 398 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 OR2K2Q8NGT1 345 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 SOX21Q9Y651 276 aaPredicted RBP9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 IGKV3D-15A0A087WSY6 115 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 IGHV2OR16-5A0A0B4J2B6 119 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 EMP1P54849 157 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 RPL30P62888 115 aaKnown RBP9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 MST1LQ2TV78 715 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 CALHM1Q8IU99 346 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 A0A0G2JNJ9 132 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 FAM90A10PA6NDY2 464 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 FAM90A18PA6NE21 464 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 FAM90A16PA6NEW6 464 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 FAM90A20PA6NIJ5 464 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 FAM90A8PA6NJQ4 464 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 FAM90A7PA6NKC0 464 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 FAM90A22PA8MWA6 464 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 FAM90A12PA8MX19 464 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 FAM90A5PA8MXJ8 464 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 FAM90A23PA8MXZ1 464 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 FAM90A15PP0C7V4 464 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 FAM90A13PP0C7W8 464 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 FAM90A14PP0C7W9 464 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 FAM90A24PP0C7X0 464 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 MPZP25189 248 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 HBBP68871 147 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 TFF3Q07654 80 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 OR1L8Q8NGR8 309 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 HARBI1Q96MB7 349 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 Q9UFV3 132 aa9.56□□□□□ -0.88
NPC1L1-201ENST00000289547 AKAP6Q13023 2319 aa9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 MED12Q93074 2177 aa9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 TRAV9-1A0A075B6T8 112 aa9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 IGHV2-5P01817 119 aa9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 CLPSP04118 112 aa9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 C5orf30Q96GV9 206 aa9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 APC2O95996 2303 aa9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 TEX38Q6PEX7 206 aa9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 ESPL1Q14674 2120 aa9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 PLXNA2O75051 1894 aa9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 IGHV3-21A0A0B4J1V1 117 aa9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 PRDX2P32119 198 aa9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 OR1N2Q8NGR9 330 aa9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 OR1L1Q8NH94 360 aa9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 RFNGQ9Y644 331 aa9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 SUPT4H1P63272 117 aaKnown RBP9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 HOXA4Q00056 320 aaPredicted RBP9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 TWIST1Q15672 202 aa9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 PAQR4Q8N4S7 273 aaPredicted RBP9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 SRSF12Q8WXF0 261 aaKnown RBP9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 ZNF414Q96IQ9 312 aa9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 NABP2Q9BQ15 211 aa9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 KLF2Q9Y5W3 355 aaPredicted RBP9.55□□□□□ -0.88
NPC1L1-201ENST00000289547 HYPMO75409 117 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 IL4P05112 153 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 APELAP0DMC3 54 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 PTGDSP41222 190 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 KCNMB1Q16558 191 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 ZNF645Q8N7E2 425 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 TM2D1Q9BX74 207 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 IGHV3OR15-7A0A075B7D8 119 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 TRAV8-6A0A0B4J262 113 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 CGAP01215 116 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 LINC00114Q6XXX2 140 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 STPG3Q8N7X2 389 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 ORAOV1Q8WV07 137 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 TYMSP04818 313 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 BMI1P35226 326 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 DRAM1Q8N682 238 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 FAM169BQ8N8A8 192 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 PKIBQ9C010 78 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 ZNF257Q9Y2Q1 563 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 MPDZO75970 2070 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 A0A1B0GW64 132 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 TMEM189A5PLL7 270 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 CEACAM18A8MTB9 384 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 PRR30Q53SZ7 412 aaPredicted RBP9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 GGNQ86UU5 652 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 ZNF418Q8TF45 676 aaPredicted RBP9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 MRPL13Q9BYD1 178 aaKnown RBP9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 TNFRSF19Q9NS68 423 aa9.54□□□□□ -0.88
NPC1L1-201ENST00000289547 A0A1W2PRD5 423 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 A0A1W2PRF3 423 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 A0A1W2PRM7 423 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 MGST3O14880 152 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 OR2H2O95918 312 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 PNKDQ8N490 385 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 VOPP1Q96AW1 172 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 C18orf12Q96KH6 178 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 RASL11BQ9BPW5 248 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 GVINP1Q7Z2Y8 2422 aa9.53□□□□□ -0.88
NPC1L1-201ENST00000289547 ZNF716A6NP11 495 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms