RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 CEACAM1P13688 526 aa12.88□□□□□ -0.35
SHROOM4-201ENST00000289292 SUPT4H1P63272 117 aaKnown RBP12.88□□□□□ -0.35
SHROOM4-201ENST00000289292 SFXN3Q9BWM7 321 aa12.88□□□□□ -0.35
SHROOM4-201ENST00000289292 NAPSAO96009 420 aa12.87□□□□□ -0.35
SHROOM4-201ENST00000289292 C1orf174Q8IYL3 243 aa12.87□□□□□ -0.35
SHROOM4-201ENST00000289292 MRPL20Q9BYC9 149 aaKnown RBP12.87□□□□□ -0.35
SHROOM4-201ENST00000289292 NDUFA3O95167 84 aa12.87□□□□□ -0.35
SHROOM4-201ENST00000289292 GPX1P07203 203 aa12.87□□□□□ -0.35
SHROOM4-201ENST00000289292 TEX45Q8NA69 505 aa12.87□□□□□ -0.35
SHROOM4-201ENST00000289292 FOXC2Q99958 501 aa12.87□□□□□ -0.35
SHROOM4-201ENST00000289292 FBXL15Q9H469 300 aa12.87□□□□□ -0.35
SHROOM4-201ENST00000289292 MST1P26927 711 aa12.87□□□□□ -0.35
SHROOM4-201ENST00000289292 GPR183P32249 361 aa12.87□□□□□ -0.35
SHROOM4-201ENST00000289292 NUTF2P61970 127 aaKnown RBP12.87□□□□□ -0.35
SHROOM4-201ENST00000289292 C5orf63A6NC05 138 aa12.87□□□□□ -0.35
SHROOM4-201ENST00000289292 CECR9P0C854 216 aa12.87□□□□□ -0.35
SHROOM4-201ENST00000289292 OR9G1Q8NH87 305 aa12.87□□□□□ -0.35
SHROOM4-201ENST00000289292 LINC00470Q9BZP3 86 aa12.87□□□□□ -0.35
SHROOM4-201ENST00000289292 RPS20P60866 119 aaKnown RBP12.87□□□□□ -0.35
SHROOM4-201ENST00000289292 EBLN2Q6P2I7 272 aa12.86□□□□□ -0.35
SHROOM4-201ENST00000289292 REPIN1Q9BWE0 567 aaKnown RBP12.86□□□□□ -0.35
SHROOM4-201ENST00000289292 PRDM13Q9H4Q3 707 aa12.86□□□□□ -0.35
SHROOM4-201ENST00000289292 TRBV6-7A0A0A0MS04 114 aa12.86□□□□□ -0.35
SHROOM4-201ENST00000289292 PSG7Q13046 419 aa12.86□□□□□ -0.35
SHROOM4-201ENST00000289292 OCC1Q8TAD7 63 aa12.86□□□□□ -0.35
SHROOM4-201ENST00000289292 GPX4P36969 197 aaPredicted RBP12.86□□□□□ -0.35
SHROOM4-201ENST00000289292 ZNF581Q9P0T4 197 aa12.86□□□□□ -0.35
SHROOM4-201ENST00000289292 OR9G9P0C7N8 305 aa12.86□□□□□ -0.35
SHROOM4-201ENST00000289292 PYYP10082 97 aa12.86□□□□□ -0.35
SHROOM4-201ENST00000289292 ZNF56Q15929 161 aa12.86□□□□□ -0.35
SHROOM4-201ENST00000289292 SYT8Q8NBV8 401 aa12.86□□□□□ -0.35
SHROOM4-201ENST00000289292 TMEM186Q96B77 213 aa12.86□□□□□ -0.35
SHROOM4-201ENST00000289292 Q9H3A6 140 aa12.86□□□□□ -0.35
SHROOM4-201ENST00000289292 ADCYAP1P18509 176 aa12.86□□□□□ -0.35
SHROOM4-201ENST00000289292 CTSSP25774 331 aa12.86□□□□□ -0.35
SHROOM4-201ENST00000289292 PYY3Q5JQD4 70 aa12.86□□□□□ -0.35
SHROOM4-201ENST00000289292 OR52E5Q8NH55 327 aa12.86□□□□□ -0.35
SHROOM4-201ENST00000289292 CASP8AP2Q9UKL3 1982 aa12.85□□□□□ -0.35
SHROOM4-201ENST00000289292 TRAV24A0A0B4J272 114 aa12.85□□□□□ -0.35
SHROOM4-201ENST00000289292 IGKV3OR2-268A0A0C4DH90 116 aa12.85□□□□□ -0.35
SHROOM4-201ENST00000289292 FTH1P19P0C7X4 201 aa12.85□□□□□ -0.35
SHROOM4-201ENST00000289292 IGHV1-2P23083 117 aa12.85□□□□□ -0.35
SHROOM4-201ENST00000289292 AMMECR1LQ6DCA0 310 aa12.85□□□□□ -0.35
SHROOM4-201ENST00000289292 DNASE2BQ8WZ79 361 aa12.85□□□□□ -0.35
SHROOM4-201ENST00000289292 CLEC7AQ9BXN2 247 aa12.85□□□□□ -0.35
SHROOM4-201ENST00000289292 SAA2-SAA4A0A096LPE2 208 aa12.85□□□□□ -0.35
SHROOM4-201ENST00000289292 IGKV1-12A0A0C4DH73 117 aa12.85□□□□□ -0.35
SHROOM4-201ENST00000289292 UBE2L6O14933 153 aa12.85□□□□□ -0.35
SHROOM4-201ENST00000289292 IGKV1D-12P01611 117 aa12.85□□□□□ -0.35
SHROOM4-201ENST00000289292 SAA2P0DJI9 122 aaPredicted RBP12.85□□□□□ -0.35
SHROOM4-201ENST00000289292 SIP14410 1827 aa12.84□□□□□ -0.35
SHROOM4-201ENST00000289292 M0R381 172 aa12.84□□□□□ -0.35
SHROOM4-201ENST00000289292 WBP1Q96G27 269 aa12.84□□□□□ -0.35
SHROOM4-201ENST00000289292 IGHV1-69-2A0A0G2JMI3 117 aa12.84□□□□□ -0.35
SHROOM4-201ENST00000289292 FAM169BQ8N8A8 192 aa12.84□□□□□ -0.35
SHROOM4-201ENST00000289292 MDC1Q14676 2089 aaKnown RBP12.84□□□□□ -0.35
SHROOM4-201ENST00000289292 DMRTA2Q96SC8 542 aa12.84□□□□□ -0.35
SHROOM4-201ENST00000289292 NAA38Q9BRA0 125 aaKnown RBP12.84□□□□□ -0.35
SHROOM4-201ENST00000289292 CACNA1IQ9P0X4 2223 aa12.84□□□□□ -0.35
SHROOM4-201ENST00000289292 FAM27E3Q08E93 113 aa12.84□□□□□ -0.35
SHROOM4-201ENST00000289292 Q6ZT83 130 aa12.84□□□□□ -0.35
SHROOM4-201ENST00000289292 LRTM2Q8N967 370 aa12.84□□□□□ -0.35
SHROOM4-201ENST00000289292 FMC1Q96HJ9 113 aa12.84□□□□□ -0.35
SHROOM4-201ENST00000289292 NPIPB11E5RHQ5 1161 aa12.84□□□□□ -0.35
SHROOM4-201ENST00000289292 APOMO95445 188 aa12.84□□□□□ -0.35
SHROOM4-201ENST00000289292 ATP5G2Q06055 141 aa12.84□□□□□ -0.35
SHROOM4-201ENST00000289292 MTURNQ8N3F0 131 aa12.84□□□□□ -0.35
SHROOM4-201ENST00000289292 FDCSPQ8NFU4 85 aa12.84□□□□□ -0.35
SHROOM4-201ENST00000289292 IGKV1-27A0A075B6S5 117 aa12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 CCL1P22362 96 aa12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 FAM89BQ8N5H3 189 aa12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 MYLKQ15746 1914 aa12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 TRAV30A0A087WSZ9 112 aa12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 FOXH1O75593 365 aa12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 TMEM170BQ5T4T1 132 aa12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 C19orf54Q5BKX5 351 aa12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 SPATA31B1PQ5VZV4 182 aa12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 ZNF497Q6ZNH5 498 aa12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 OR11H12B2RN74 326 aa12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 UMODP07911 640 aa12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 SAA1P0DJI8 122 aaPredicted RBP12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 MPZP25189 248 aa12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 STARD6P59095 220 aa12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 OR11H1Q8NG94 326 aa12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 OR11H2Q8NH07 326 aa12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 CA7P43166 264 aa12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 LINC01560Q8TB33 94 aa12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 CFHR5Q9BXR6 569 aa12.83□□□□□ -0.36
SHROOM4-201ENST00000289292 TRAV5A0A0B4J249 113 aa12.82□□□□□ -0.36
SHROOM4-201ENST00000289292 BMPERQ8N8U9 685 aa12.82□□□□□ -0.36
SHROOM4-201ENST00000289292 A0A1B0GUT8 65 aa12.82□□□□□ -0.36
SHROOM4-201ENST00000289292 C9JCJ5 164 aa12.82□□□□□ -0.36
SHROOM4-201ENST00000289292 LOC105371242A0A075B767 164 aa12.82□□□□□ -0.36
SHROOM4-201ENST00000289292 TTC9CQ8N5M4 171 aa12.82□□□□□ -0.36
SHROOM4-201ENST00000289292 DLEU1O43261 78 aa12.82□□□□□ -0.36
SHROOM4-201ENST00000289292 LEPP41159 167 aa12.82□□□□□ -0.36
SHROOM4-201ENST00000289292 C10orf126Q8N4M7 172 aa12.82□□□□□ -0.36
SHROOM4-201ENST00000289292 TET1Q8NFU7 2136 aa12.82□□□□□ -0.36
SHROOM4-201ENST00000289292 KBTBD11-OT1A0A1B0GTJ5 212 aa12.82□□□□□ -0.36
SHROOM4-201ENST00000289292 KIR3DL3Q8N743 410 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms