RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 SPSB1Q96BD6 273 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 SIGMAR1Q99720 223 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 SPATA25Q9BR10 227 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 CXCL16Q9H2A7 254 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 MIXL1Q9H2W2 232 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 FBXL15Q9H469 300 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 EYSQ5T1H1 3165 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 IGHV3-66A0A0C4DH42 116 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 WISP1O95388 367 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 IGFBP3P17936 291 aaPredicted RBP3.73□□□□□ -1.81
NCOA1-201ENST00000288599 LINC00303Q3SY05 128 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 C11orf87Q6NUJ2 197 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 PAQR4Q8N4S7 273 aaPredicted RBP3.73□□□□□ -1.81
NCOA1-201ENST00000288599 WNT2BQ93097 391 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 SMDT1Q9H4I9 107 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 MTCH2Q9Y6C9 303 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 MYO18AQ92614 2054 aaKnown RBP3.73□□□□□ -1.81
NCOA1-201ENST00000288599 TRAV8-2A0A0B4J237 113 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 TRAV1-1A0A0B4J248 108 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 SHISA8B8ZZ34 492 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 C11orf94C9JXX5 98 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 H3BTX0 84 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 PRB2P02812 416 aaPredicted RBP3.73□□□□□ -1.81
NCOA1-201ENST00000288599 FRMD6-AS1P0C7T7 363 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 P2RY4P51582 365 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 HLA-DRB3P79483 266 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 IRF3Q14653 427 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 C10orf111Q8N326 155 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 DNAJC4Q9NNZ3 241 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 LRP12Q9Y561 859 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 DNAH14Q0VDD8 3507 aa3.73□□□□□ -1.81
NCOA1-201ENST00000288599 TRAV40A0A0B4J280 105 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 TRDV1A0A1B0GX56 115 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 ITGB1BP1O14713 200 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 FAM90A2PQ658T7 463 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 WFDC11Q8NEX6 87 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 SPTSSBQ8NFR3 76 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 CLDND2Q8NHS1 167 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 WDR34Q96EX3 536 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 TINAGQ9UJW2 476 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 CHD5Q8TDI0 1954 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 RNF223E7ERA6 249 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 NPIPB7O75200 414 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 IFITM1P13164 125 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 FOXF1Q12946 379 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 C17orf99Q6UX52 265 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 OR10S1Q8NGN2 331 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 SERP1Q9Y6X1 66 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 NPIPB8E9PQR5 432 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 NPIPB9F8W1W9 429 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 RCC1P18754 421 aaPredicted RBP3.72□□□□□ -1.81
NCOA1-201ENST00000288599 ZNF121P58317 390 aaPredicted RBP3.72□□□□□ -1.81
NCOA1-201ENST00000288599 Q6Q795 121 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 WDFY1Q8IWB7 410 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 OR4D5Q8NGN0 318 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 ST20Q9HBF5 79 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 TMEM160Q9NX00 188 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 KCNE5Q9UJ90 142 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 IGHV3-49A0A0A0MS15 119 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 PLNP26678 52 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 CTRLP40313 264 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 CA13Q8N1Q1 262 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 PP6455Q8WZ26 134 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 NPY6RQ99463 290 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 DDA1Q9BW61 102 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 DPM3Q9P2X0 92 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 KLF2Q9Y5W3 355 aaPredicted RBP3.72□□□□□ -1.81
NCOA1-201ENST00000288599 CACNA1GO43497 2377 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 FAM90A18PA6NE21 464 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 FAM90A16PA6NEW6 464 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 FAM90A9PA6NNJ1 464 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 FAM90A5PA8MXJ8 464 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 EFEMP2O95967 443 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 IGKV1D-16P01601 117 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 IGKV1-16P04430 117 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 FAM90A15PP0C7V4 464 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 FAM90A14PP0C7W9 464 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 FBXW9Q5XUX1 488 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 HCP5Q6MZN7 132 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 LINC00596Q86U02 117 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 SPEGQ15772 3267 aa3.72□□□□□ -1.81
NCOA1-201ENST00000288599 IGF2P01344 180 aa3.71□□□□□ -1.81
NCOA1-201ENST00000288599 RPL34P49207 117 aaKnown RBP3.71□□□□□ -1.81
NCOA1-201ENST00000288599 NPC2P61916 151 aa3.71□□□□□ -1.81
NCOA1-201ENST00000288599 FABP5Q01469 135 aa3.71□□□□□ -1.81
NCOA1-201ENST00000288599 IL13RA2Q14627 380 aa3.71□□□□□ -1.81
NCOA1-201ENST00000288599 BRK1Q8WUW1 75 aa3.71□□□□□ -1.81
NCOA1-201ENST00000288599 LSM10Q969L4 123 aaKnown RBP3.71□□□□□ -1.81
NCOA1-201ENST00000288599 IGHV3OR16-13A0A075B7E8 117 aa3.71□□□□□ -1.82
NCOA1-201ENST00000288599 TRAV14DV4A0A0A6YYC5 116 aa3.71□□□□□ -1.82
NCOA1-201ENST00000288599 IGHV3-74A0A0B4J1X5 117 aa3.71□□□□□ -1.82
NCOA1-201ENST00000288599 NUPR2A6NF83 97 aa3.71□□□□□ -1.82
NCOA1-201ENST00000288599 TAPBPO15533 448 aa3.71□□□□□ -1.82
NCOA1-201ENST00000288599 PTP4A3O75365 173 aa3.71□□□□□ -1.82
NCOA1-201ENST00000288599 IGKV4-1P06312 121 aa3.71□□□□□ -1.82
NCOA1-201ENST00000288599 LYL1P12980 280 aa3.71□□□□□ -1.82
NCOA1-201ENST00000288599 CD68P34810 354 aaPredicted RBP3.71□□□□□ -1.82
NCOA1-201ENST00000288599 ZNF146Q15072 292 aa3.71□□□□□ -1.82
NCOA1-201ENST00000288599 ATXN8Q156A1 80 aa3.71□□□□□ -1.82
NCOA1-201ENST00000288599 C9orf50Q5SZB4 431 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms