RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 C15orf61A6NNL5 157 aa6.99□□□□□ -1.29
HMGN1-201ENST00000288344 NOL3O60936 208 aaKnown RBP6.99□□□□□ -1.29
HMGN1-201ENST00000288344 ACTL6BO94805 426 aa6.99□□□□□ -1.29
HMGN1-201ENST00000288344 TRAPPC2P0DI81 140 aa6.99□□□□□ -1.29
HMGN1-201ENST00000288344 TRAPPC2BP0DI82 140 aa6.99□□□□□ -1.29
HMGN1-201ENST00000288344 HOXD3P31249 432 aaPredicted RBP6.99□□□□□ -1.29
HMGN1-201ENST00000288344 THOC7Q6I9Y2 204 aaKnown RBP6.99□□□□□ -1.29
HMGN1-201ENST00000288344 SLC25A42Q86VD7 318 aa6.99□□□□□ -1.29
HMGN1-201ENST00000288344 SELENOHQ8IZQ5 122 aaKnown RBP6.99□□□□□ -1.29
HMGN1-201ENST00000288344 Q8N402 240 aa6.99□□□□□ -1.29
HMGN1-201ENST00000288344 DMBX1Q8NFW5 382 aa6.99□□□□□ -1.29
HMGN1-201ENST00000288344 OR1L8Q8NGR8 309 aa6.99□□□□□ -1.29
HMGN1-201ENST00000288344 OR5B3Q8NH48 314 aa6.99□□□□□ -1.29
HMGN1-201ENST00000288344 QTRT1Q9BXR0 403 aaKnown RBP6.99□□□□□ -1.29
HMGN1-201ENST00000288344 TMEM222Q9H0R3 208 aa6.99□□□□□ -1.29
HMGN1-201ENST00000288344 SIGLEC8Q9NYZ4 499 aa6.99□□□□□ -1.29
HMGN1-201ENST00000288344 PEF1Q9UBV8 284 aaKnown RBP6.99□□□□□ -1.29
HMGN1-201ENST00000288344 LSM4Q9Y4Z0 139 aaKnown RBP6.99□□□□□ -1.29
HMGN1-201ENST00000288344 CCDC160A6NGH7 325 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 DISC1C4P0D8 188 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 OVOL1O14753 267 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 B3GALNT1O75752 331 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 OR2J3O76001 311 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 CD40LGP29965 261 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 INSL3P51460 131 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 PPP5CP53041 499 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 HSPE1P61604 102 aaKnown RBP6.98□□□□□ -1.29
HMGN1-201ENST00000288344 TMEM187Q14656 261 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 C15orf32Q32M92 178 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 BSXQ3C1V8 233 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 SCGB2B2Q4G0G5 96 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 LINC00299Q6ZSB3 139 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 ZNF114Q8NC26 417 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 PHB2Q99623 299 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 PRRT1Q99946 306 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 KRTAP4-8Q9BYQ9 185 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 NAA60Q9H7X0 242 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 COA4Q9NYJ1 87 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 PRNDQ9UKY0 176 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 OR51B2Q9Y5P1 312 aa6.98□□□□□ -1.29
HMGN1-201ENST00000288344 C13orf42A0A1B0GVH6 325 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 MFSD2BA6NFX1 497 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 SEC14L6B5MCN3 397 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 K7EIM0 57 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 PLA2G10O15496 165 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 IGLV1-51P01701 117 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 HLA-AP01891 365 aaKnown RBP6.97□□□□□ -1.29
HMGN1-201ENST00000288344 REG1AP05451 166 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 CSN3P07498 182 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 OR5AC1P0C628 307 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 PGAM2P15259 253 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 BTCP35070 178 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 PRCDQ00LT1 54 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 ATP5G2Q06055 141 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 C9orf66Q5T8R8 295 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 HSD17B13Q7Z5P4 300 aaPredicted RBP6.97□□□□□ -1.29
HMGN1-201ENST00000288344 GPHB5Q86YW7 130 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 OR2C3Q8N628 320 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 CLRN3Q8NCR9 226 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 ZNF502Q8TBZ5 544 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 DPF1Q92782 380 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 TSC22D3Q99576 134 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 COMMD5Q9GZQ3 224 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 ZNF355PQ9NSJ1 428 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 FKBP11Q9NYL4 201 aa6.97□□□□□ -1.29
HMGN1-201ENST00000288344 F11RQ9Y624 299 aaKnown RBP6.97□□□□□ -1.29
HMGN1-201ENST00000288344 DNAH7Q8WXX0 4024 aa6.96□□□□□ -1.29
HMGN1-201ENST00000288344 I3L2K1 104 aa6.96□□□□□ -1.3
HMGN1-201ENST00000288344 OR13C7P0DN81 318 aa6.96□□□□□ -1.3
HMGN1-201ENST00000288344 HIST1H1BP16401 226 aaKnown RBP6.96□□□□□ -1.3
HMGN1-201ENST00000288344 ZP3P21754 424 aa6.96□□□□□ -1.3
HMGN1-201ENST00000288344 FCGR2BP31994 310 aaPredicted RBP6.96□□□□□ -1.3
HMGN1-201ENST00000288344 S100A5P33763 92 aa6.96□□□□□ -1.3
HMGN1-201ENST00000288344 ERVK-16P61578 105 aa6.96□□□□□ -1.3
HMGN1-201ENST00000288344 PYDC2Q56P42 97 aa6.96□□□□□ -1.3
HMGN1-201ENST00000288344 NMSQ5H8A3 153 aa6.96□□□□□ -1.3
HMGN1-201ENST00000288344 LRTM2Q8N967 370 aa6.96□□□□□ -1.3
HMGN1-201ENST00000288344 OR1P1Q8NH06 330 aa6.96□□□□□ -1.3
HMGN1-201ENST00000288344 OR52E5Q8NH55 327 aa6.96□□□□□ -1.3
HMGN1-201ENST00000288344 VN1R17PQ8TDU5 208 aa6.96□□□□□ -1.3
HMGN1-201ENST00000288344 TMEM170AQ8WVE7 144 aa6.96□□□□□ -1.3
HMGN1-201ENST00000288344 IL22RA2Q969J5 263 aa6.96□□□□□ -1.3
HMGN1-201ENST00000288344 LSM10Q969L4 123 aaKnown RBP6.96□□□□□ -1.3
HMGN1-201ENST00000288344 GPR146Q96CH1 333 aa6.96□□□□□ -1.3
HMGN1-201ENST00000288344 ATP6V0BQ99437 205 aa6.96□□□□□ -1.3
HMGN1-201ENST00000288344 GPR61Q9BZJ8 451 aa6.96□□□□□ -1.3
HMGN1-201ENST00000288344 COPZ2Q9P299 210 aa6.96□□□□□ -1.3
HMGN1-201ENST00000288344 SCP2D1Q9UJQ7 156 aa6.96□□□□□ -1.3
HMGN1-201ENST00000288344 TENM3Q9P273 2699 aa6.95□□□□□ -1.3
HMGN1-201ENST00000288344 LGALS9O00182 355 aa6.95□□□□□ -1.3
HMGN1-201ENST00000288344 ST8SIA3O43173 380 aa6.95□□□□□ -1.3
HMGN1-201ENST00000288344 PITX3O75364 302 aa6.95□□□□□ -1.3
HMGN1-201ENST00000288344 SNAPC5O75971 98 aa6.95□□□□□ -1.3
HMGN1-201ENST00000288344 CLEC3BP05452 202 aa6.95□□□□□ -1.3
HMGN1-201ENST00000288344 C8orf88P0DMB2 117 aa6.95□□□□□ -1.3
HMGN1-201ENST00000288344 S100GP29377 79 aa6.95□□□□□ -1.3
HMGN1-201ENST00000288344 EXOSC2Q13868 293 aaKnown RBP6.95□□□□□ -1.3
HMGN1-201ENST00000288344 H2BFWTQ7Z2G1 175 aa6.95□□□□□ -1.3
HMGN1-201ENST00000288344 TOMM5Q8N4H5 51 aa6.95□□□□□ -1.3
HMGN1-201ENST00000288344 CCDC71LQ8N9Z2 235 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms