RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 MPV17P39210 176 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 FOXF2Q12947 444 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 ZNF718Q3SXZ3 478 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 C19orf35Q6ZS72 473 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 LYG1Q8N1E2 194 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 FAM169BQ8N8A8 192 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 OR5B3Q8NH48 314 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 CDC42EP3Q9UKI2 254 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 IGHV2OR16-5A0A0B4J2B6 119 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 F2RL2O00254 374 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 ZNF324O75467 553 aaPredicted RBP8.57□□□□□ -1.04
SKA1-201ENST00000285116 OR9G9P0C7N8 305 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 PMCHP20382 165 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 CEBPDP49716 269 aaPredicted RBP8.57□□□□□ -1.04
SKA1-201ENST00000285116 TREML4Q6UXN2 200 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 LINC00696Q6ZRV3 163 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 OR13A1Q8NGR1 328 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 GGTLC1Q9BX51 225 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 NAT8BQ9UHF3 227 aa8.57□□□□□ -1.04
SKA1-201ENST00000285116 ABCA4P78363 2273 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 FAM208BQ5VWN6 2430 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 FLNCQ14315 2725 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 LOC105371242A0A075B767 164 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 IGHV2-70DA0A0C4DH43 119 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 IGLV1-44P01699 117 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 C3orf79P0CE67 100 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 CEACAM8P31997 349 aaPredicted RBP8.56□□□□□ -1.04
SKA1-201ENST00000285116 HINT1P49773 126 aaPredicted RBP8.56□□□□□ -1.04
SKA1-201ENST00000285116 RPL31P62899 125 aaKnown RBP8.56□□□□□ -1.04
SKA1-201ENST00000285116 PMCHL1Q16048 86 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 UNQ5815/PRO19632Q6UWF5 114 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 PNKDQ8N490 385 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.56□□□□□ -1.04
SKA1-201ENST00000285116 ST6GALNAC3Q8NDV1 305 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 MRGPRDQ8TDS7 321 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 OBP2BQ9NPH6 170 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 MED13LQ71F56 2210 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 CFAP46Q8IYW2 2715 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 TRGV10A0A0A0MS01 117 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 TRAV34A0A0B4J273 112 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 RBMXL2O75526 392 aaKnown RBP8.56□□□□□ -1.04
SKA1-201ENST00000285116 GABRA2P47869 451 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 ZNF83P51522 516 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 FOXC1Q12948 553 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 FBLN7Q53RD9 439 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 OR8I2Q8N0Y5 310 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 TMEM178AQ8NBL3 297 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 DDB2Q92466 427 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 EAF1Q96JC9 268 aaPredicted RBP8.56□□□□□ -1.04
SKA1-201ENST00000285116 UHRF2Q96PU4 802 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 MGST2Q99735 147 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 V9GYV3 84 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 PKDREJQ9NTG1 2253 aa8.56□□□□□ -1.04
SKA1-201ENST00000285116 IGHV2-26A0A0B4J1V2 119 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 WNT9BO14905 357 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 GFRA3O60609 400 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 PROP1O75360 226 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 FRMD6-AS1P0C7T7 363 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 CX3CL1P78423 397 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 RELBQ01201 579 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 FAM214BQ7L5A3 538 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 TMPRSS7Q7RTY8 843 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 NIT1Q86X76 327 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 BORCS7Q96B45 105 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 YTHDF2Q9Y5A9 579 aaKnown RBP8.55□□□□□ -1.04
SKA1-201ENST00000285116 PPBPP02775 128 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 OR10J4P0C629 311 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 TNFSF4P23510 183 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 SSTR5P35346 364 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 RNFT1Q5M7Z0 435 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 STUMQ69YW2 141 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 TMEM136Q6ZRR5 245 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 OR4C5Q8NGB2 326 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 RCHY1Q96PM5 261 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 PSG11Q9UQ72 335 aa8.55□□□□□ -1.04
SKA1-201ENST00000285116 IGHV1-69-2A0A0G2JMI3 117 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 TM4SF5O14894 197 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 MT-CO2P00403 227 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 GPR12P47775 334 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 POU2AF1Q16633 256 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 TMEM95Q3KNT9 176 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 Q8TCH9 128 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 WNT10AQ9GZT5 417 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 SLC25A10Q9UBX3 287 aaPredicted RBP8.54□□□□□ -1.04
SKA1-201ENST00000285116 FOXA2Q9Y261 457 aaPredicted RBP8.54□□□□□ -1.04
SKA1-201ENST00000285116 CADP27708 2225 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 DCHS2Q6V1P9 2916 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 RRHO14718 337 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 CA2P00918 260 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 FTH1P19P0C7X4 201 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 GCHFRP30047 84 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 ATP5IP56385 69 aaPredicted RBP8.54□□□□□ -1.04
SKA1-201ENST00000285116 RHOBP62745 196 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 SPINK9Q5DT21 86 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 ALKBH2Q6NS38 261 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 CD177Q8N6Q3 437 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 OR4A16Q8NH70 328 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 C1orf159Q96HA4 380 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 DEFB127Q9H1M4 99 aa8.54□□□□□ -1.04
SKA1-201ENST00000285116 RAB9BQ9NP90 201 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms