RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 ZNF329Q86UD4 541 aa17.08■□□□□ 0.32
CACNA1B-201ENST00000277549 PAX1P15863 534 aa17.08■□□□□ 0.32
CACNA1B-201ENST00000277549 FAM166AQ6J272 317 aa17.08■□□□□ 0.32
CACNA1B-201ENST00000277549 KLHL30-AS1Q8NEE0 82 aa17.08■□□□□ 0.32
CACNA1B-201ENST00000277549 CLPSP04118 112 aa17.08■□□□□ 0.32
CACNA1B-201ENST00000277549 SSBP4Q9BWG4 385 aaPredicted RBP17.08■□□□□ 0.32
CACNA1B-201ENST00000277549 G6PC2Q9NQR9 355 aa17.08■□□□□ 0.32
CACNA1B-201ENST00000277549 SMCHD1A6NHR9 2005 aa17.07■□□□□ 0.32
CACNA1B-201ENST00000277549 SLC25A15Q9Y619 301 aa17.07■□□□□ 0.32
CACNA1B-201ENST00000277549 PLXNB2O15031 1838 aa17.07■□□□□ 0.32
CACNA1B-201ENST00000277549 GZMBP10144 247 aa17.07■□□□□ 0.32
CACNA1B-201ENST00000277549 MYOD1P15172 320 aa17.07■□□□□ 0.32
CACNA1B-201ENST00000277549 FAM19A2Q8N3H0 131 aa17.07■□□□□ 0.32
CACNA1B-201ENST00000277549 PLA2G10O15496 165 aa17.07■□□□□ 0.32
CACNA1B-201ENST00000277549 RND3P61587 244 aa17.07■□□□□ 0.32
CACNA1B-201ENST00000277549 ZNF837Q96EG3 531 aaPredicted RBP17.07■□□□□ 0.32
CACNA1B-201ENST00000277549 C5orf66Q9H5L9 145 aa17.07■□□□□ 0.32
CACNA1B-201ENST00000277549 MIA3Q5JRA6 1907 aa17.07■□□□□ 0.32
CACNA1B-201ENST00000277549 IFI27P40305 119 aaPredicted RBP17.07■□□□□ 0.32
CACNA1B-201ENST00000277549 Q96M66 194 aa17.07■□□□□ 0.32
CACNA1B-201ENST00000277549 SAA2-SAA4A0A096LPE2 208 aa17.06■□□□□ 0.32
CACNA1B-201ENST00000277549 SAA2P0DJI9 122 aaPredicted RBP17.06■□□□□ 0.32
CACNA1B-201ENST00000277549 A0A1B0GWB2 263 aa17.06■□□□□ 0.32
CACNA1B-201ENST00000277549 HOXA3O43365 443 aaPredicted RBP17.06■□□□□ 0.32
CACNA1B-201ENST00000277549 SRSF4Q08170 494 aaKnown RBP17.06■□□□□ 0.32
CACNA1B-201ENST00000277549 PRADC1Q9BSG0 188 aa17.06■□□□□ 0.32
CACNA1B-201ENST00000277549 KBTBD11-OT1A0A1B0GTJ5 212 aa17.06■□□□□ 0.32
CACNA1B-201ENST00000277549 WDYHV1Q96HA8 205 aa17.06■□□□□ 0.32
CACNA1B-201ENST00000277549 SEPSECSQ9HD40 501 aaKnown RBP17.06■□□□□ 0.32
CACNA1B-201ENST00000277549 WNT2P09544 360 aa17.06■□□□□ 0.32
CACNA1B-201ENST00000277549 DEFB130BP0DP73 79 aa17.06■□□□□ 0.32
CACNA1B-201ENST00000277549 DEFB130AP0DP74 79 aa17.06■□□□□ 0.32
CACNA1B-201ENST00000277549 ATP5G3P48201 142 aa17.06■□□□□ 0.32
CACNA1B-201ENST00000277549 ZP1P60852 638 aa17.06■□□□□ 0.32
CACNA1B-201ENST00000277549 TMEM187Q14656 261 aa17.06■□□□□ 0.32
CACNA1B-201ENST00000277549 VAX1Q5SQQ9 334 aa17.06■□□□□ 0.32
CACNA1B-201ENST00000277549 RCHY1Q96PM5 261 aa17.06■□□□□ 0.32
CACNA1B-201ENST00000277549 SCN7AQ01118 1682 aa17.06■□□□□ 0.32
CACNA1B-201ENST00000277549 USP54Q70EL1 1684 aa17.05■□□□□ 0.32
CACNA1B-201ENST00000277549 RPL15P61313 204 aaKnown RBP17.05■□□□□ 0.32
CACNA1B-201ENST00000277549 NPCDR1Q9BY65 106 aa17.05■□□□□ 0.32
CACNA1B-201ENST00000277549 ZNF625Q96I27 306 aaPredicted RBP17.05■□□□□ 0.32
CACNA1B-201ENST00000277549 MT-ND6P03923 174 aa17.05■□□□□ 0.32
CACNA1B-201ENST00000277549 BRWD1Q9NSI6 2320 aa17.05■□□□□ 0.32
CACNA1B-201ENST00000277549 PSG7Q13046 419 aa17.05■□□□□ 0.32
CACNA1B-201ENST00000277549 VKORC1Q9BQB6 163 aa17.05■□□□□ 0.32
CACNA1B-201ENST00000277549 CHCHD2Q9Y6H1 151 aaPredicted RBP17.05■□□□□ 0.32
CACNA1B-201ENST00000277549 HOXB1P14653 301 aaPredicted RBP17.05■□□□□ 0.32
CACNA1B-201ENST00000277549 TIMM23O14925 209 aa17.04■□□□□ 0.32
CACNA1B-201ENST00000277549 JPT2Q9H910 190 aa17.04■□□□□ 0.32
CACNA1B-201ENST00000277549 CFHR1Q03591 330 aa17.04■□□□□ 0.32
CACNA1B-201ENST00000277549 ZNF474Q6S9Z5 364 aaPredicted RBP17.04■□□□□ 0.32
CACNA1B-201ENST00000277549 MBD3L1Q8WWY6 194 aa17.04■□□□□ 0.32
CACNA1B-201ENST00000277549 IGKV1D-43A0A0B4J1Z2 117 aa17.03■□□□□ 0.32
CACNA1B-201ENST00000277549 SIGLEC15Q6ZMC9 328 aa17.03■□□□□ 0.32
CACNA1B-201ENST00000277549 ALS2Q96Q42 1657 aa17.03■□□□□ 0.32
CACNA1B-201ENST00000277549 RPL32P62910 135 aaKnown RBP17.03■□□□□ 0.32
CACNA1B-201ENST00000277549 Q5PR19 223 aa17.03■□□□□ 0.32
CACNA1B-201ENST00000277549 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.03■□□□□ 0.32
CACNA1B-201ENST00000277549 SPRR3Q9UBC9 169 aa17.03■□□□□ 0.32
CACNA1B-201ENST00000277549 DNAJC13O75165 2243 aa17.03■□□□□ 0.32
CACNA1B-201ENST00000277549 CA1P00915 261 aaPredicted RBP17.03■□□□□ 0.32
CACNA1B-201ENST00000277549 IL17RELQ6ZVW7 336 aa17.03■□□□□ 0.32
CACNA1B-201ENST00000277549 IMMP1LQ96LU5 166 aa17.03■□□□□ 0.32
CACNA1B-201ENST00000277549 ASCL2Q99929 193 aa17.03■□□□□ 0.32
CACNA1B-201ENST00000277549 UQCR10Q9UDW1 63 aa17.03■□□□□ 0.32
CACNA1B-201ENST00000277549 KNTC1P50748 2209 aa17.03■□□□□ 0.32
CACNA1B-201ENST00000277549 IGKV2-40A0A087WW87 121 aaPredicted RBP17.03■□□□□ 0.32
CACNA1B-201ENST00000277549 IGKV2D-40P01614 121 aaPredicted RBP17.03■□□□□ 0.32
CACNA1B-201ENST00000277549 FMC1Q96HJ9 113 aa17.03■□□□□ 0.32
CACNA1B-201ENST00000277549 MCM3APO60318 1980 aa17.02■□□□□ 0.32
CACNA1B-201ENST00000277549 FSTP19883 344 aa17.02■□□□□ 0.32
CACNA1B-201ENST00000277549 UNQ6494/PRO21346Q6UXR6 183 aa17.02■□□□□ 0.32
CACNA1B-201ENST00000277549 LY6HO94772 140 aa17.02■□□□□ 0.31
CACNA1B-201ENST00000277549 PAX8Q06710 450 aa17.02■□□□□ 0.31
CACNA1B-201ENST00000277549 GDF15Q99988 308 aa17.02■□□□□ 0.31
CACNA1B-201ENST00000277549 RPP21Q9H633 154 aaKnown RBP17.02■□□□□ 0.31
CACNA1B-201ENST00000277549 RNF223E7ERA6 249 aa17.02■□□□□ 0.31
CACNA1B-201ENST00000277549 ANXA2RQ3ZCQ2 193 aa17.02■□□□□ 0.31
CACNA1B-201ENST00000277549 LAMTOR3Q9UHA4 124 aa17.02■□□□□ 0.31
CACNA1B-201ENST00000277549 TRAV8-2A0A0B4J237 113 aa17.01■□□□□ 0.31
CACNA1B-201ENST00000277549 SRSF6Q13247 344 aaKnown RBP17.01■□□□□ 0.31
CACNA1B-201ENST00000277549 IGFL4Q6B9Z1 124 aa17.01■□□□□ 0.31
CACNA1B-201ENST00000277549 MLNRO43193 412 aa17.01■□□□□ 0.31
CACNA1B-201ENST00000277549 RNASE7Q9H1E1 156 aaKnown RBP17.01■□□□□ 0.31
CACNA1B-201ENST00000277549 KNL1Q8NG31 2342 aa17.01■□□□□ 0.31
CACNA1B-201ENST00000277549 SMIM8Q96KF7 97 aa17.01■□□□□ 0.31
CACNA1B-201ENST00000277549 LIMS1P48059 325 aa17.01■□□□□ 0.31
CACNA1B-201ENST00000277549 CTAG1AP78358 180 aa17.01■□□□□ 0.31
CACNA1B-201ENST00000277549 FOXF2Q12947 444 aa17.01■□□□□ 0.31
CACNA1B-201ENST00000277549 SAXO1Q8IYX7 474 aa17.01■□□□□ 0.31
CACNA1B-201ENST00000277549 MYO5AQ9Y4I1 1855 aaKnown RBP17.01■□□□□ 0.31
CACNA1B-201ENST00000277549 PYYP10082 97 aa17.01■□□□□ 0.31
CACNA1B-201ENST00000277549 GTF3AQ92664 365 aaKnown RBP17■□□□□ 0.31
CACNA1B-201ENST00000277549 HLA-DQB1P01920 261 aa17■□□□□ 0.31
CACNA1B-201ENST00000277549 HIST1H4AP62805 103 aaKnown RBP17■□□□□ 0.31
CACNA1B-201ENST00000277549 ZNF48Q96MX3 618 aaPredicted RBP17■□□□□ 0.31
CACNA1B-201ENST00000277549 ZNF257Q9Y2Q1 563 aa17■□□□□ 0.31
CACNA1B-201ENST00000277549 TM4SF5O14894 197 aa16.99■□□□□ 0.31
CACNA1B-201ENST00000277549 RNF182Q8N6D2 247 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms