RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 GCHFRP30047 84 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 VDAC2P45880 294 aaPredicted RBP8.5□□□□□ -1.05
UPF3B-201ENST00000276201 CX3CL1P78423 397 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 HLA-DRB5Q30154 266 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 TDRG1Q3Y452 100 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 LRP11Q86VZ4 500 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 BAGE3Q86Y29 109 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 BAGE2Q86Y30 109 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 KLHDC1Q8N7A1 406 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 OR5B3Q8NH48 314 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 ZDHHC16Q969W1 377 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 EAF1Q96JC9 268 aaPredicted RBP8.5□□□□□ -1.05
UPF3B-201ENST00000276201 MRPS16Q9Y3D3 137 aaKnown RBP8.5□□□□□ -1.05
UPF3B-201ENST00000276201 V9GYV3 84 aa8.5□□□□□ -1.05
UPF3B-201ENST00000276201 TRAV38-1A0A0B4J264 116 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 C12orf77C9JDV5 145 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 DIRC3C9JPN6 131 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 K7EN84 100 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 CCNOP22674 350 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 ZNF816Q0VGE8 651 aaPredicted RBP8.49□□□□□ -1.05
UPF3B-201ENST00000276201 RASL11AQ6T310 242 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 TREML4Q6UXN2 200 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 WDR86Q86TI4 376 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 OR2D3Q8NGH3 330 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 VN1R17PQ8TDU5 208 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 FAM222BQ8WU58 562 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 NANOS1Q8WY41 292 aaKnown RBP8.49□□□□□ -1.05
UPF3B-201ENST00000276201 KCNS1Q96KK3 526 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 MGST2Q99735 147 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 SAMD10Q9BYL1 202 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 MRPL27Q9P0M9 148 aaKnown RBP8.49□□□□□ -1.05
UPF3B-201ENST00000276201 PAM16Q9Y3D7 125 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 C16orf97H3BN30 126 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 K7EP13 123 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 FCN1O00602 326 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 SIAH2O43255 324 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 IGLC2P0DOY2 106 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 IGLC3P0DOY3 106 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 EGR1P18146 543 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 PRRX1P54821 245 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 UBE2G2P60604 165 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 RHOBP62745 196 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 HTD2P86397 168 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 PSG7Q13046 419 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 OR5I1Q13606 314 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 MORN2Q502X0 79 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 USF3Q68DE3 2245 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 CYB5R2Q6BCY4 276 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 MMD2Q8IY49 270 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 APH1AQ96BI3 265 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 GAL3ST2Q9H3Q3 398 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 CDC42EP3Q9UKI2 254 aa8.49□□□□□ -1.05
UPF3B-201ENST00000276201 YTHDF2Q9Y5A9 579 aaKnown RBP8.49□□□□□ -1.05
UPF3B-201ENST00000276201 A0A096LPE4 126 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 A0A1W2PPZ6 126 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 ITGB1BP1O14713 200 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 HAND1O96004 215 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 HLA-DQA1P01909 254 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 CCL2P13500 99 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 CA6P23280 308 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 KLF3P57682 345 aaPredicted RBP8.48□□□□□ -1.05
UPF3B-201ENST00000276201 SUMO1P63165 101 aaKnown RBP8.48□□□□□ -1.05
UPF3B-201ENST00000276201 TMEM136Q6ZRR5 245 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 MYPOPQ86VE0 399 aaPredicted RBP8.48□□□□□ -1.05
UPF3B-201ENST00000276201 CXorf67Q86X51 503 aaPredicted RBP8.48□□□□□ -1.05
UPF3B-201ENST00000276201 C11orf42Q8N5U0 333 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 GNB4Q9HAV0 340 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 NRN1Q9NPD7 142 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 IQCF6A8MYZ5 107 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 HBZP02008 142 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 EDDM3BP56851 147 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 KRTAP10-9P60411 292 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 DMRTA1Q5VZB9 504 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 Q6ZT83 130 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 C22orf34Q6ZV56 151 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 PNKDQ8N490 385 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 WIPF2Q8TF74 440 aaPredicted RBP8.48□□□□□ -1.05
UPF3B-201ENST00000276201 BCL2L2Q92843 193 aaPredicted RBP8.48□□□□□ -1.05
UPF3B-201ENST00000276201 NINJ1Q92982 152 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 DNAJC4Q9NNZ3 241 aa8.48□□□□□ -1.05
UPF3B-201ENST00000276201 POLQO75417 2590 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 PGPEP1LA6NFU8 196 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 SNURFLB1AK76 121 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 ISLRO14498 428 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 RRHO14718 337 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 IGHV3-9P01782 118 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 ADH4P08319 380 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 DUTP33316 252 aaKnown RBP8.47□□□□□ -1.05
UPF3B-201ENST00000276201 KIR2DS2P43631 304 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 RPS20P60866 119 aaKnown RBP8.47□□□□□ -1.05
UPF3B-201ENST00000276201 RPL31P62899 125 aaKnown RBP8.47□□□□□ -1.05
UPF3B-201ENST00000276201 PMCHL1Q16048 86 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 RTL8BQ17RB0 113 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 SPATA45Q537H7 98 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 GCSAMLQ5JQS6 135 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 CORO2AQ92828 525 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 NPVFQ9HCQ7 196 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 TMEM167BQ9NRX6 74 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 LAMTOR2Q9Y2Q5 125 aa8.47□□□□□ -1.05
UPF3B-201ENST00000276201 TACC2O95359 2948 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms