RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 UCP3P55916 312 aa9.97□□□□□ -0.81
SHPRH-201ENST00000275233 TET1Q8NFU7 2136 aa9.97□□□□□ -0.81
SHPRH-201ENST00000275233 TRAV40A0A0B4J280 105 aa9.97□□□□□ -0.81
SHPRH-201ENST00000275233 ATP5G3P48201 142 aa9.97□□□□□ -0.81
SHPRH-201ENST00000275233 TMEM30BQ3MIR4 351 aa9.97□□□□□ -0.81
SHPRH-201ENST00000275233 TMEM136Q6ZRR5 245 aa9.97□□□□□ -0.81
SHPRH-201ENST00000275233 LRRC37AA6NMS7 1700 aa9.97□□□□□ -0.81
SHPRH-201ENST00000275233 SAPCD1Q5SSQ6 148 aa9.97□□□□□ -0.81
SHPRH-201ENST00000275233 RTN4RL2Q86UN3 420 aa9.97□□□□□ -0.81
SHPRH-201ENST00000275233 ST6GALNAC3Q8NDV1 305 aa9.97□□□□□ -0.81
SHPRH-201ENST00000275233 TXNDC17Q9BRA2 123 aa9.97□□□□□ -0.81
SHPRH-201ENST00000275233 SAA1P0DJI8 122 aaPredicted RBP9.97□□□□□ -0.81
SHPRH-201ENST00000275233 REC114Q7Z4M0 266 aa9.97□□□□□ -0.81
SHPRH-201ENST00000275233 OR52E5Q8NH55 327 aa9.97□□□□□ -0.81
SHPRH-201ENST00000275233 OSR1Q8TAX0 266 aaPredicted RBP9.97□□□□□ -0.81
SHPRH-201ENST00000275233 IQCF6A8MYZ5 107 aa9.96□□□□□ -0.81
SHPRH-201ENST00000275233 THBDP07204 575 aa9.96□□□□□ -0.81
SHPRH-201ENST00000275233 CD33P20138 364 aa9.96□□□□□ -0.81
SHPRH-201ENST00000275233 FOXF2Q12947 444 aa9.96□□□□□ -0.81
SHPRH-201ENST00000275233 GFI1BQ5VTD9 330 aa9.96□□□□□ -0.81
SHPRH-201ENST00000275233 FBLIM1Q8WUP2 373 aa9.96□□□□□ -0.81
SHPRH-201ENST00000275233 ST6GALNAC6Q969X2 333 aa9.96□□□□□ -0.81
SHPRH-201ENST00000275233 C19orf24Q9BVV8 132 aa9.96□□□□□ -0.81
SHPRH-201ENST00000275233 PRELID3AQ96N28 172 aa9.96□□□□□ -0.81
SHPRH-201ENST00000275233 C2orf88Q9BSF0 95 aa9.96□□□□□ -0.81
SHPRH-201ENST00000275233 RPRMQ9NS64 109 aa9.96□□□□□ -0.81
SHPRH-201ENST00000275233 PEMTQ9UBM1 199 aa9.96□□□□□ -0.81
SHPRH-201ENST00000275233 CD7P09564 240 aa9.96□□□□□ -0.82
SHPRH-201ENST00000275233 Q9H3A6 140 aa9.96□□□□□ -0.82
SHPRH-201ENST00000275233 DNAL4O96015 105 aa9.96□□□□□ -0.82
SHPRH-201ENST00000275233 MRPL14Q6P1L8 145 aaKnown RBP9.96□□□□□ -0.82
SHPRH-201ENST00000275233 A0A087WV48 116 aa9.96□□□□□ -0.82
SHPRH-201ENST00000275233 ZNF506Q5JVG8 444 aa9.96□□□□□ -0.82
SHPRH-201ENST00000275233 SLC25A34Q6PIV7 304 aa9.96□□□□□ -0.82
SHPRH-201ENST00000275233 DEFB104AQ8WTQ1 72 aa9.96□□□□□ -0.82
SHPRH-201ENST00000275233 SCGB3A1Q96QR1 104 aa9.96□□□□□ -0.82
SHPRH-201ENST00000275233 ALKBH7Q9BT30 221 aaPredicted RBP9.96□□□□□ -0.82
SHPRH-201ENST00000275233 SHISA3A0PJX4 238 aa9.95□□□□□ -0.82
SHPRH-201ENST00000275233 APOHP02749 345 aaPredicted RBP9.95□□□□□ -0.82
SHPRH-201ENST00000275233 IFI6P09912 130 aa9.95□□□□□ -0.82
SHPRH-201ENST00000275233 GATAD1Q8WUU5 269 aa9.95□□□□□ -0.82
SHPRH-201ENST00000275233 SDF2L1Q9HCN8 221 aa9.95□□□□□ -0.82
SHPRH-201ENST00000275233 IGHV1-18A0A0C4DH31 117 aa9.95□□□□□ -0.82
SHPRH-201ENST00000275233 RAMP3O60896 148 aa9.95□□□□□ -0.82
SHPRH-201ENST00000275233 JOSD1Q15040 202 aaPredicted RBP9.95□□□□□ -0.82
SHPRH-201ENST00000275233 PMCHL1Q16048 86 aa9.95□□□□□ -0.82
SHPRH-201ENST00000275233 TMEM219Q86XT9 240 aa9.95□□□□□ -0.82
SHPRH-201ENST00000275233 LINC00312Q9Y6C7 94 aa9.95□□□□□ -0.82
SHPRH-201ENST00000275233 COTL1Q14019 142 aa9.95□□□□□ -0.82
SHPRH-201ENST00000275233 NBR2O15453 112 aa9.95□□□□□ -0.82
SHPRH-201ENST00000275233 MALP21145 153 aa9.95□□□□□ -0.82
SHPRH-201ENST00000275233 RCC1LQ96I51 464 aaKnown RBP9.95□□□□□ -0.82
SHPRH-201ENST00000275233 METRNQ9UJH8 293 aa9.95□□□□□ -0.82
SHPRH-201ENST00000275233 PPIFP30405 207 aaKnown RBP9.95□□□□□ -0.82
SHPRH-201ENST00000275233 SCN10AQ9Y5Y9 1956 aa9.95□□□□□ -0.82
SHPRH-201ENST00000275233 FBLN7Q53RD9 439 aa9.94□□□□□ -0.82
SHPRH-201ENST00000275233 RTBDNQ9BSG5 229 aaPredicted RBP9.94□□□□□ -0.82
SHPRH-201ENST00000275233 TM2D1Q9BX74 207 aa9.94□□□□□ -0.82
SHPRH-201ENST00000275233 CD55P08174 381 aa9.94□□□□□ -0.82
SHPRH-201ENST00000275233 LYZL4Q96KX0 146 aa9.94□□□□□ -0.82
SHPRH-201ENST00000275233 NPFFR1Q9GZQ6 430 aa9.94□□□□□ -0.82
SHPRH-201ENST00000275233 TBR1Q16650 682 aa9.94□□□□□ -0.82
SHPRH-201ENST00000275233 ZNF414Q96IQ9 312 aa9.94□□□□□ -0.82
SHPRH-201ENST00000275233 C11orf68Q9H3H3 251 aaKnown RBP9.94□□□□□ -0.82
SHPRH-201ENST00000275233 CACNA1IQ9P0X4 2223 aa9.94□□□□□ -0.82
SHPRH-201ENST00000275233 GNLYP22749 145 aa9.94□□□□□ -0.82
SHPRH-201ENST00000275233 ZNF585BQ52M93 769 aa9.94□□□□□ -0.82
SHPRH-201ENST00000275233 HIST1H2BAQ96A08 127 aa9.94□□□□□ -0.82
SHPRH-201ENST00000275233 PQLC2LA1A4F0 135 aa9.94□□□□□ -0.82
SHPRH-201ENST00000275233 KLRD1Q13241 179 aa9.94□□□□□ -0.82
SHPRH-201ENST00000275233 FGFBP3Q8TAT2 258 aa9.94□□□□□ -0.82
SHPRH-201ENST00000275233 PRSS22Q9GZN4 317 aa9.94□□□□□ -0.82
SHPRH-201ENST00000275233 PGPEP1Q9NXJ5 209 aa9.94□□□□□ -0.82
SHPRH-201ENST00000275233 H7C1H1 209 aa9.93□□□□□ -0.82
SHPRH-201ENST00000275233 LAIR2Q6ISS4 152 aa9.93□□□□□ -0.82
SHPRH-201ENST00000275233 COPS9Q8WXC6 57 aa9.93□□□□□ -0.82
SHPRH-201ENST00000275233 PLSCR2Q9NRY7 297 aa9.93□□□□□ -0.82
SHPRH-201ENST00000275233 MRPS16Q9Y3D3 137 aaKnown RBP9.93□□□□□ -0.82
SHPRH-201ENST00000275233 J3QW42 95 aa9.93□□□□□ -0.82
SHPRH-201ENST00000275233 SRSF6Q13247 344 aaKnown RBP9.93□□□□□ -0.82
SHPRH-201ENST00000275233 THADAQ6YHU6 1953 aa9.93□□□□□ -0.82
SHPRH-201ENST00000275233 NPIPB13A6NJU9 1138 aa9.93□□□□□ -0.82
SHPRH-201ENST00000275233 UQCR10Q9UDW1 63 aa9.93□□□□□ -0.82
SHPRH-201ENST00000275233 RALGAPA1Q6GYQ0 2036 aa9.93□□□□□ -0.82
SHPRH-201ENST00000275233 TMEM167AQ8TBQ9 72 aa9.93□□□□□ -0.82
SHPRH-201ENST00000275233 GREB1Q4ZG55 1949 aa9.93□□□□□ -0.82
SHPRH-201ENST00000275233 RHOGP84095 191 aa9.93□□□□□ -0.82
SHPRH-201ENST00000275233 ZNF415Q09FC8 603 aa9.93□□□□□ -0.82
SHPRH-201ENST00000275233 JKAMPQ9P055 326 aa9.93□□□□□ -0.82
SHPRH-201ENST00000275233 C12orf54Q6X4T0 127 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.92□□□□□ -0.82
SHPRH-201ENST00000275233 C8orf46Q8TAG6 207 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 SCN5AQ14524 2016 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 ERVH48-1M5A8F1 160 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 CD59P13987 128 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 CDX1P47902 265 aaPredicted RBP9.92□□□□□ -0.82
SHPRH-201ENST00000275233 MEF2CQ06413 473 aaPredicted RBP9.92□□□□□ -0.82
SHPRH-201ENST00000275233 DEFB121Q5J5C9 76 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 CFAP161Q6P656 301 aa9.92□□□□□ -0.82
SHPRH-201ENST00000275233 OR5AN1Q8NGI8 311 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms