RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 PRDM6Q9NQX0 595 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 A0A087WX48 190 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 TMED7-TICAM2A0A0A6YYA0 188 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 C21orf140B9A014 251 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 H3BMG7 143 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 M0QXV9 152 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 KIR2DL2P43627 348 aaPredicted RBP7.63□□□□□ -1.19
PDGFC-201ENST00000274071 MFAP2P55001 183 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 EDDM3BP56851 147 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 MALLQ13021 153 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 LINC01545Q5VT33 79 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 C11orf52Q96A22 123 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 SIGLEC8Q9NYZ4 499 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 TBC1D29Q9UFV1 150 aa7.63□□□□□ -1.19
PDGFC-201ENST00000274071 IGKV1-12A0A0C4DH73 117 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 A1L4Q6 167 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 NPIPB5A8MRT5 1133 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 IGKV1D-12P01611 117 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 WIPI1Q5MNZ9 446 aaPredicted RBP7.62□□□□□ -1.19
PDGFC-201ENST00000274071 TMEM92Q6UXU6 159 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 Q6ZS49 121 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 SMRP1Q8NCR6 262 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 OSR1Q8TAX0 266 aaPredicted RBP7.62□□□□□ -1.19
PDGFC-201ENST00000274071 KCNS2Q9ULS6 477 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 INSIG2Q9Y5U4 225 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 DHHO43323 396 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 OR2J3O76001 311 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 COL8A2P25067 703 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 FHL3Q13643 280 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 IBA57Q5T440 356 aaKnown RBP7.62□□□□□ -1.19
PDGFC-201ENST00000274071 ASPHD1Q5U4P2 390 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 ABHD17BQ5VST6 288 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 OSR2Q8N2R0 312 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 TSACCQ96A04 125 aaPredicted RBP7.62□□□□□ -1.19
PDGFC-201ENST00000274071 C12orf49Q9H741 205 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 KNL1Q8NG31 2342 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 IGKV1-6A0A0C4DH72 117 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 H0YGG7 62 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 CXorf1O96002 111 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 MT-CO3P00414 261 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 MRPS21P82921 87 aaKnown RBP7.62□□□□□ -1.19
PDGFC-201ENST00000274071 KLRD1Q13241 179 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 TIGITQ495A1 244 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 RASL11AQ6T310 242 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 MOB1BQ7L9L4 216 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 BMFQ96LC9 184 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 SSBP3Q9BWW4 388 aaPredicted RBP7.62□□□□□ -1.19
PDGFC-201ENST00000274071 PPDPFQ9H3Y8 114 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 ZNF576Q9H609 170 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 VPREB3Q9UKI3 123 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 COL4A2P08572 1712 aa7.62□□□□□ -1.19
PDGFC-201ENST00000274071 hADV38S2A0JD32 116 aa7.61□□□□□ -1.19
PDGFC-201ENST00000274071 C19orf67A6NJJ6 358 aa7.61□□□□□ -1.19
PDGFC-201ENST00000274071 P04436 131 aa7.61□□□□□ -1.19
PDGFC-201ENST00000274071 GP1BBP13224 206 aa7.61□□□□□ -1.19
PDGFC-201ENST00000274071 GNG3P63215 75 aa7.61□□□□□ -1.19
PDGFC-201ENST00000274071 ZXDAP98168 799 aa7.61□□□□□ -1.19
PDGFC-201ENST00000274071 TFF2Q03403 129 aa7.61□□□□□ -1.19
PDGFC-201ENST00000274071 ZNF146Q15072 292 aa7.61□□□□□ -1.19
PDGFC-201ENST00000274071 TM4SF20Q53R12 229 aa7.61□□□□□ -1.19
PDGFC-201ENST00000274071 ZNF645Q8N7E2 425 aa7.61□□□□□ -1.19
PDGFC-201ENST00000274071 OR1L3Q8NH93 324 aa7.61□□□□□ -1.19
PDGFC-201ENST00000274071 CCL4L1Q8NHW4 92 aa7.61□□□□□ -1.19
PDGFC-201ENST00000274071 CHCHD1Q96BP2 118 aaKnown RBP7.61□□□□□ -1.19
PDGFC-201ENST00000274071 GCM1Q9NP62 436 aa7.61□□□□□ -1.19
PDGFC-201ENST00000274071 STARD5Q9NSY2 213 aa7.61□□□□□ -1.19
PDGFC-201ENST00000274071 TRIOBPQ9H2D6 2365 aa7.61□□□□□ -1.19
PDGFC-201ENST00000274071 ARHGEF17Q96PE2 2063 aaPredicted RBP7.61□□□□□ -1.19
PDGFC-201ENST00000274071 PRTN3P24158 256 aa7.61□□□□□ -1.19
PDGFC-201ENST00000274071 FOXA3P55318 350 aaPredicted RBP7.61□□□□□ -1.19
PDGFC-201ENST00000274071 DAZAP2Q15038 168 aaPredicted RBP7.61□□□□□ -1.19
PDGFC-201ENST00000274071 Q6AWC8 147 aa7.61□□□□□ -1.19
PDGFC-201ENST00000274071 LINC00696Q6ZRV3 163 aa7.61□□□□□ -1.19
PDGFC-201ENST00000274071 CACNA1DQ01668 2161 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 PIGBOS1A0A0B4J2F0 54 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 K7ERJ3 54 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 CAMPP49913 170 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 FOXI1Q12951 378 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 FAM162BQ5T6X4 162 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 OR4X2Q8NGF9 303 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 OR9G4Q8NGQ1 327 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 NUDT22Q9BRQ3 303 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 MYO15AQ9UKN7 3530 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 GAGE12JA6NER3 117 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 PRSS29PA6NIE9 313 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 C2CD4DB7Z1M9 353 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 CCDC179H3BU77 68 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 SMAD7O15105 426 aaKnown RBP7.6□□□□□ -1.19
PDGFC-201ENST00000274071 GAGE7O76087 117 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 OR5AL1P0C617 328 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 GAGE12FP0CL80 117 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 GAGE12GP0CL81 117 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 GAGE12IP0CL82 117 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 CD24P25063 80 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 FASLGP48023 281 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 TCTAP57738 103 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 GAGE4Q13068 117 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 TDHQ8IZJ6 230 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 NUP35Q8NFH5 326 aa7.6□□□□□ -1.19
PDGFC-201ENST00000274071 PHLDA1Q8WV24 401 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms