RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 VMA21Q3ZAQ7 101 aa19.62■□□□□ 0.73
SSBP4-201ENST00000270061 HSD17B11Q8NBQ5 300 aa19.62■□□□□ 0.73
SSBP4-201ENST00000270061 GNPNAT1Q96EK6 184 aaPredicted RBP19.62■□□□□ 0.73
SSBP4-201ENST00000270061 HEYLQ9NQ87 328 aaPredicted RBP19.62■□□□□ 0.73
SSBP4-201ENST00000270061 C15orf62A8K5M9 175 aa19.61■□□□□ 0.73
SSBP4-201ENST00000270061 PRCDQ00LT1 54 aa19.61■□□□□ 0.73
SSBP4-201ENST00000270061 SLC38A11Q08AI6 406 aa19.61■□□□□ 0.73
SSBP4-201ENST00000270061 PINX1Q96BK5 328 aaKnown RBP19.61■□□□□ 0.73
SSBP4-201ENST00000270061 PFDN2Q9UHV9 154 aa19.61■□□□□ 0.73
SSBP4-201ENST00000270061 NBEAL1Q6ZS30 2694 aa19.61■□□□□ 0.73
SSBP4-201ENST00000270061 TEX50A0A1B0GTY4 177 aa19.6■□□□□ 0.73
SSBP4-201ENST00000270061 ATP6V0CP27449 155 aa19.6■□□□□ 0.73
SSBP4-201ENST00000270061 HOXA1P49639 335 aaPredicted RBP19.6■□□□□ 0.73
SSBP4-201ENST00000270061 MINOS1Q5TGZ0 78 aa19.6■□□□□ 0.73
SSBP4-201ENST00000270061 TEX45Q8NA69 505 aa19.6■□□□□ 0.73
SSBP4-201ENST00000270061 OR10P1Q8NGE3 313 aa19.6■□□□□ 0.73
SSBP4-201ENST00000270061 MINOS1-NBL1R4GNA1 71 aa19.6■□□□□ 0.73
SSBP4-201ENST00000270061 IGHV3-72A0A0B4J1Y9 119 aa19.6■□□□□ 0.73
SSBP4-201ENST00000270061 BTBD17A6NE02 478 aa19.6■□□□□ 0.73
SSBP4-201ENST00000270061 OOSP1A8MZH6 123 aa19.6■□□□□ 0.73
SSBP4-201ENST00000270061 OR8U8P0C7N1 319 aa19.6■□□□□ 0.73
SSBP4-201ENST00000270061 RAB5CP51148 216 aa19.6■□□□□ 0.73
SSBP4-201ENST00000270061 RPL15P61313 204 aaKnown RBP19.6■□□□□ 0.73
SSBP4-201ENST00000270061 RPL8P62917 257 aaKnown RBP19.6■□□□□ 0.73
SSBP4-201ENST00000270061 HABP2Q14520 560 aaPredicted RBP19.6■□□□□ 0.73
SSBP4-201ENST00000270061 LILRB2Q8N423 598 aa19.6■□□□□ 0.73
SSBP4-201ENST00000270061 CD1BP29016 333 aa19.59■□□□□ 0.73
SSBP4-201ENST00000270061 OR8G2PQ6IF36 304 aa19.59■□□□□ 0.73
SSBP4-201ENST00000270061 RITA1Q96K30 269 aa19.59■□□□□ 0.73
SSBP4-201ENST00000270061 CITED4Q96RK1 184 aa19.59■□□□□ 0.73
SSBP4-201ENST00000270061 SH3BGRL3Q9H299 93 aa19.59■□□□□ 0.73
SSBP4-201ENST00000270061 ENY2Q9NPA8 101 aa19.59■□□□□ 0.73
SSBP4-201ENST00000270061 ZNF705EA8MWA4 302 aaPredicted RBP19.58■□□□□ 0.73
SSBP4-201ENST00000270061 ZNF747Q9BV97 191 aa19.58■□□□□ 0.73
SSBP4-201ENST00000270061 INS-IGF2F8WCM5 200 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 IFNA10P01566 189 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 CRYGBP07316 175 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 MDKP21741 143 aaPredicted RBP19.57■□□□□ 0.72
SSBP4-201ENST00000270061 BLOC1S1P78537 153 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 LRRC75BQ2VPJ9 315 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 C1RLQ9NZP8 487 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 MYOD1P15172 320 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 ATP5IP56385 69 aaPredicted RBP19.57■□□□□ 0.72
SSBP4-201ENST00000270061 LGALS4P56470 323 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 VWC2Q2TAL6 325 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 THNSL2Q86YJ6 484 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 OR1L8Q8NGR8 309 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 OR4F5Q8NH21 305 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 SCGB1C1Q8TD33 95 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 C17orf50Q8WW18 174 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 CFHR4Q92496 578 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 TMEM147Q9BVK8 224 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 COMMD5Q9GZQ3 224 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 PLEKHA3Q9HB20 300 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 NDUFA4L2Q9NRX3 87 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 VPREB3Q9UKI3 123 aa19.57■□□□□ 0.72
SSBP4-201ENST00000270061 TBL2Q9Y4P3 447 aaKnown RBP19.57■□□□□ 0.72
SSBP4-201ENST00000270061 MFSD2BA6NFX1 497 aa19.56■□□□□ 0.72
SSBP4-201ENST00000270061 TIMM23O14925 209 aa19.56■□□□□ 0.72
SSBP4-201ENST00000270061 CCDC144NLQ6NUI1 221 aa19.56■□□□□ 0.72
SSBP4-201ENST00000270061 LHFPL4Q7Z7J7 247 aa19.56■□□□□ 0.72
SSBP4-201ENST00000270061 EIF4E3Q8N5X7 224 aaKnown RBP19.56■□□□□ 0.72
SSBP4-201ENST00000270061 OR5R1Q8NH85 324 aa19.56■□□□□ 0.72
SSBP4-201ENST00000270061 PARP11Q9NR21 331 aa19.56■□□□□ 0.72
SSBP4-201ENST00000270061 UMAD1C9J7I0 102 aa19.55■□□□□ 0.72
SSBP4-201ENST00000270061 SLC25A17O43808 307 aa19.55■□□□□ 0.72
SSBP4-201ENST00000270061 RAB11AP62491 216 aa19.55■□□□□ 0.72
SSBP4-201ENST00000270061 MRGPRG-AS1Q2M3A8 158 aa19.55■□□□□ 0.72
SSBP4-201ENST00000270061 SLC25A24Q6NUK1 477 aa19.55■□□□□ 0.72
SSBP4-201ENST00000270061 HSD17B13Q7Z5P4 300 aaPredicted RBP19.55■□□□□ 0.72
SSBP4-201ENST00000270061 OR2G3Q8NGZ4 309 aa19.55■□□□□ 0.72
SSBP4-201ENST00000270061 GGACTQ9BVM4 153 aa19.55■□□□□ 0.72
SSBP4-201ENST00000270061 WDR61Q9GZS3 305 aaKnown RBP19.55■□□□□ 0.72
SSBP4-201ENST00000270061 ZNF430Q9H8G1 570 aaPredicted RBP19.55■□□□□ 0.72
SSBP4-201ENST00000270061 A0A1B0GUS0 222 aa19.55■□□□□ 0.72
SSBP4-201ENST00000270061 RRHO14718 337 aa19.55■□□□□ 0.72
SSBP4-201ENST00000270061 NDUFA7O95182 113 aa19.55■□□□□ 0.72
SSBP4-201ENST00000270061 PSG5Q15238 335 aa19.55■□□□□ 0.72
SSBP4-201ENST00000270061 SHISA2Q6UWI4 295 aa19.55■□□□□ 0.72
SSBP4-201ENST00000270061 SLC24A4Q8NFF2 622 aa19.55■□□□□ 0.72
SSBP4-201ENST00000270061 TMEM170AQ8WVE7 144 aa19.55■□□□□ 0.72
SSBP4-201ENST00000270061 AJUBAQ96IF1 538 aa19.55■□□□□ 0.72
SSBP4-201ENST00000270061 HILPDAQ9Y5L2 63 aa19.55■□□□□ 0.72
SSBP4-201ENST00000270061 TRRAPQ9Y4A5 3859 aa19.54■□□□□ 0.72
SSBP4-201ENST00000270061 SSX3Q99909 188 aa19.54■□□□□ 0.72
SSBP4-201ENST00000270061 PSMG3Q9BT73 122 aaPredicted RBP19.54■□□□□ 0.72
SSBP4-201ENST00000270061 MEGF9Q9H1U4 602 aa19.54■□□□□ 0.72
SSBP4-201ENST00000270061 UQCC1Q9NVA1 299 aa19.54■□□□□ 0.72
SSBP4-201ENST00000270061 ANKRD34BA5PLL1 514 aa19.53■□□□□ 0.72
SSBP4-201ENST00000270061 NUDT19A8MXV4 375 aa19.53■□□□□ 0.72
SSBP4-201ENST00000270061 PRSS46E5RG02 174 aa19.53■□□□□ 0.72
SSBP4-201ENST00000270061 NPY1RP25929 384 aa19.53■□□□□ 0.72
SSBP4-201ENST00000270061 MAS1LP35410 378 aa19.53■□□□□ 0.72
SSBP4-201ENST00000270061 RUNX1Q01196 453 aa19.53■□□□□ 0.72
SSBP4-201ENST00000270061 AANATQ16613 207 aa19.53■□□□□ 0.72
SSBP4-201ENST00000270061 ETV3LQ6ZN32 361 aa19.53■□□□□ 0.72
SSBP4-201ENST00000270061 MMD2Q8IY49 270 aa19.53■□□□□ 0.72
SSBP4-201ENST00000270061 HINT2Q9BX68 163 aa19.53■□□□□ 0.72
SSBP4-201ENST00000270061 A0A1W2PN81 502 aa19.52■□□□□ 0.72
SSBP4-201ENST00000270061 H3BUX3 64 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms