RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 COX19Q49B96 90 aa13.57□□□□□ -0.24
GPC1-201ENST00000264039 TCF19Q9Y242 345 aa13.57□□□□□ -0.24
GPC1-201ENST00000264039 CORTO00230 105 aa13.57□□□□□ -0.24
GPC1-201ENST00000264039 TMPRSS2O15393 492 aa13.57□□□□□ -0.24
GPC1-201ENST00000264039 MYOD1P15172 320 aa13.57□□□□□ -0.24
GPC1-201ENST00000264039 SAMD13Q5VXD3 122 aa13.57□□□□□ -0.24
GPC1-201ENST00000264039 MGST2Q99735 147 aa13.57□□□□□ -0.24
GPC1-201ENST00000264039 MRPS16Q9Y3D3 137 aaKnown RBP13.57□□□□□ -0.24
GPC1-201ENST00000264039 AMMECR1Q9Y4X0 333 aaPredicted RBP13.57□□□□□ -0.24
GPC1-201ENST00000264039 MPC1Q9Y5U8 109 aa13.57□□□□□ -0.24
GPC1-201ENST00000264039 TMSB15BA0A087X1C1 80 aa13.57□□□□□ -0.24
GPC1-201ENST00000264039 TRAV3A0A0B4J244 114 aa13.57□□□□□ -0.24
GPC1-201ENST00000264039 IGHV1OR15-9A0A0B4J2B8 117 aa13.57□□□□□ -0.24
GPC1-201ENST00000264039 CX3CL1P78423 397 aa13.57□□□□□ -0.24
GPC1-201ENST00000264039 OR1C1Q15619 314 aa13.57□□□□□ -0.24
GPC1-201ENST00000264039 TBC1D28Q2M2D7 210 aa13.57□□□□□ -0.24
GPC1-201ENST00000264039 ABHD17BQ5VST6 288 aa13.57□□□□□ -0.24
GPC1-201ENST00000264039 MOB3BQ86TA1 216 aa13.57□□□□□ -0.24
GPC1-201ENST00000264039 C18orf32Q8TCD1 76 aa13.57□□□□□ -0.24
GPC1-201ENST00000264039 GCSHP23434 173 aa13.56□□□□□ -0.24
GPC1-201ENST00000264039 TMEM42Q69YG0 159 aa13.56□□□□□ -0.24
GPC1-201ENST00000264039 SF3B5Q9BWJ5 86 aaKnown RBP13.56□□□□□ -0.24
GPC1-201ENST00000264039 GP6Q9HCN6 339 aa13.56□□□□□ -0.24
GPC1-201ENST00000264039 GPR183P32249 361 aa13.56□□□□□ -0.24
GPC1-201ENST00000264039 OR10J3Q5JRS4 329 aa13.56□□□□□ -0.24
GPC1-201ENST00000264039 BHLHA15Q7RTS1 189 aaPredicted RBP13.56□□□□□ -0.24
GPC1-201ENST00000264039 TXNDC17Q9BRA2 123 aa13.56□□□□□ -0.24
GPC1-201ENST00000264039 DEFB127Q9H1M4 99 aa13.56□□□□□ -0.24
GPC1-201ENST00000264039 C15orf62A8K5M9 175 aa13.56□□□□□ -0.24
GPC1-201ENST00000264039 CIDEAO60543 219 aa13.56□□□□□ -0.24
GPC1-201ENST00000264039 LYZL6O75951 148 aa13.56□□□□□ -0.24
GPC1-201ENST00000264039 FXYD7P58549 80 aa13.56□□□□□ -0.24
GPC1-201ENST00000264039 RND1Q92730 232 aa13.56□□□□□ -0.24
GPC1-201ENST00000264039 CCL4P13236 92 aa13.55□□□□□ -0.24
GPC1-201ENST00000264039 ARR3P36575 388 aa13.55□□□□□ -0.24
GPC1-201ENST00000264039 GNG5P63218 68 aa13.55□□□□□ -0.24
GPC1-201ENST00000264039 TMEM136Q6ZRR5 245 aa13.55□□□□□ -0.24
GPC1-201ENST00000264039 TRAV5A0A0B4J249 113 aa13.55□□□□□ -0.24
GPC1-201ENST00000264039 ZNF207O43670 478 aaKnown RBP13.55□□□□□ -0.24
GPC1-201ENST00000264039 MPDU1O75352 247 aa13.55□□□□□ -0.24
GPC1-201ENST00000264039 IGLV3-1P01715 115 aa13.55□□□□□ -0.24
GPC1-201ENST00000264039 OPRK1P41145 380 aa13.55□□□□□ -0.24
GPC1-201ENST00000264039 EBLN2Q6P2I7 272 aa13.55□□□□□ -0.24
GPC1-201ENST00000264039 FAM168AQ92567 244 aa13.55□□□□□ -0.24
GPC1-201ENST00000264039 CSTL1Q9H114 145 aa13.55□□□□□ -0.24
GPC1-201ENST00000264039 LINC00473A8K010 186 aa13.55□□□□□ -0.24
GPC1-201ENST00000264039 P01737 135 aa13.55□□□□□ -0.24
GPC1-201ENST00000264039 HLA-DRB1P01911 266 aa13.55□□□□□ -0.24
GPC1-201ENST00000264039 DCAF12Q5T6F0 453 aa13.55□□□□□ -0.24
GPC1-201ENST00000264039 OR2M7Q8NG81 312 aa13.55□□□□□ -0.24
GPC1-201ENST00000264039 THYN1Q9P016 225 aa13.55□□□□□ -0.24
GPC1-201ENST00000264039 SH3BGRL2Q9UJC5 107 aa13.55□□□□□ -0.24
GPC1-201ENST00000264039 A6NDN8 102 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 OOEPA6NGQ2 149 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 COL8A1P27658 744 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 LINC00310P59036 64 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 ASCL4Q6XD76 172 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 PNKDQ8N490 385 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 AGBL5Q8NDL9 886 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 COMMD5Q9GZQ3 224 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 BOKQ9UMX3 212 aaPredicted RBP13.54□□□□□ -0.24
GPC1-201ENST00000264039 IGHV2-26A0A0B4J1V2 119 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 TEX50A0A1B0GTY4 177 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 PYYP10082 97 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 MLANAQ16655 118 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 KIR3DL3Q8N743 410 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 OR1B1Q8NGR6 318 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 TRIOBPQ9H2D6 2365 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 IGHV3OR15-7A0A075B7D8 119 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 IGLC7A0M8Q6 106 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 PSPNO60542 156 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 LINC00173Q6ZV60 143 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 SLC25A45Q8N413 288 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 SPCS1Q9Y6A9 102 aa13.54□□□□□ -0.24
GPC1-201ENST00000264039 THADAQ6YHU6 1953 aa13.53□□□□□ -0.24
GPC1-201ENST00000264039 FAM231BA6NCW3 169 aa13.53□□□□□ -0.24
GPC1-201ENST00000264039 SRD5A2P31213 254 aa13.53□□□□□ -0.24
GPC1-201ENST00000264039 OR4S2Q8NH73 311 aa13.53□□□□□ -0.24
GPC1-201ENST00000264039 WFDC12Q8WWY7 111 aa13.53□□□□□ -0.24
GPC1-201ENST00000264039 PRDM14Q9GZV8 571 aa13.53□□□□□ -0.24
GPC1-201ENST00000264039 V9GYV3 84 aa13.53□□□□□ -0.24
GPC1-201ENST00000264039 J3QR06 171 aa13.53□□□□□ -0.24
GPC1-201ENST00000264039 SLC25A53Q5H9E4 307 aa13.53□□□□□ -0.24
GPC1-201ENST00000264039 KCNE4Q8WWG9 221 aa13.53□□□□□ -0.24
GPC1-201ENST00000264039 C1QTNF5Q9BXJ0 243 aa13.53□□□□□ -0.24
GPC1-201ENST00000264039 SPTAN1Q13813 2472 aaKnown RBP13.53□□□□□ -0.24
GPC1-201ENST00000264039 ENSAO43768 121 aaKnown RBP13.53□□□□□ -0.24
GPC1-201ENST00000264039 VWC2Q2TAL6 325 aa13.53□□□□□ -0.24
GPC1-201ENST00000264039 LRRC10Q5BKY1 277 aa13.53□□□□□ -0.24
GPC1-201ENST00000264039 PPP1R35Q8TAP8 253 aa13.53□□□□□ -0.24
GPC1-201ENST00000264039 TRAV8-6A0A0B4J262 113 aa13.52□□□□□ -0.24
GPC1-201ENST00000264039 LPAL2Q16609 132 aa13.52□□□□□ -0.24
GPC1-201ENST00000264039 MDP1Q86V88 176 aa13.52□□□□□ -0.24
GPC1-201ENST00000264039 OR13A1Q8NGR1 328 aa13.52□□□□□ -0.24
GPC1-201ENST00000264039 SLC25A40Q8TBP6 338 aa13.52□□□□□ -0.24
GPC1-201ENST00000264039 NBEAQ8NFP9 2946 aa13.52□□□□□ -0.25
GPC1-201ENST00000264039 A0A1W2PRE2 83 aa13.52□□□□□ -0.25
GPC1-201ENST00000264039 IZUMO1RA6ND01 250 aa13.52□□□□□ -0.25
GPC1-201ENST00000264039 SCGB2A2Q13296 93 aa13.52□□□□□ -0.25
GPC1-201ENST00000264039 SSPNQ14714 243 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms