RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 PFN1P07737 140 aaKnown RBP13.42□□□□□ -0.26
PDZRN3-201ENST00000263666 MORN2Q502X0 79 aa13.42□□□□□ -0.26
PDZRN3-201ENST00000263666 PRDM13Q9H4Q3 707 aa13.42□□□□□ -0.26
PDZRN3-201ENST00000263666 WDR83OSQ9Y284 106 aa13.42□□□□□ -0.26
PDZRN3-201ENST00000263666 CCL21O00585 134 aa13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 RBP4P02753 201 aa13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 ERASQ7Z444 233 aa13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 TIMM9Q9Y5J7 89 aa13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 SAA2-SAA4A0A096LPE2 208 aa13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 SAA2P0DJI9 122 aaPredicted RBP13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 TFPI2P48307 235 aa13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 TNXAQ16473 311 aa13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 ZNF355PQ9NSJ1 428 aa13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 DCAF16Q9NXF7 216 aa13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 MRPS18CQ9Y3D5 142 aaKnown RBP13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 CPAMD8Q8IZJ3 1885 aa13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 TRAV5A0A0B4J249 113 aa13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 EREGO14944 169 aa13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 GPR6P46095 362 aaPredicted RBP13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 IBA57Q5T440 356 aaKnown RBP13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 Q6ZS49 121 aa13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 GGTLC1Q9BX51 225 aa13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 IL19Q9UHD0 177 aa13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 RAXQ9Y2V3 346 aa13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 NAV3Q8IVL0 2385 aa13.41□□□□□ -0.26
PDZRN3-201ENST00000263666 SLC25A17O43808 307 aa13.4□□□□□ -0.26
PDZRN3-201ENST00000263666 FOXA3P55318 350 aaPredicted RBP13.4□□□□□ -0.26
PDZRN3-201ENST00000263666 RNF151Q2KHN1 245 aa13.4□□□□□ -0.26
PDZRN3-201ENST00000263666 KRTCAP3Q53RY4 240 aa13.4□□□□□ -0.26
PDZRN3-201ENST00000263666 C1orf185Q5T7R7 199 aa13.4□□□□□ -0.26
PDZRN3-201ENST00000263666 PRSS33Q8NF86 280 aa13.4□□□□□ -0.26
PDZRN3-201ENST00000263666 OR2T6Q8NHC8 308 aa13.4□□□□□ -0.26
PDZRN3-201ENST00000263666 ANKHD1Q8IWZ3 2542 aaKnown RBP13.4□□□□□ -0.26
PDZRN3-201ENST00000263666 KIR3DL3Q8N743 410 aa13.4□□□□□ -0.26
PDZRN3-201ENST00000263666 NPIPB3Q92617 1050 aa13.4□□□□□ -0.26
PDZRN3-201ENST00000263666 MGST2Q99735 147 aa13.4□□□□□ -0.26
PDZRN3-201ENST00000263666 SAP30LQ9HAJ7 183 aa13.4□□□□□ -0.26
PDZRN3-201ENST00000263666 hADV38S2A0JD32 116 aa13.4□□□□□ -0.26
PDZRN3-201ENST00000263666 RBFOX2O43251 390 aaKnown RBP eCLIP13.4□□□□□ -0.26
PDZRN3-201ENST00000263666 LYZP61626 148 aa13.4□□□□□ -0.26
PDZRN3-201ENST00000263666 EFNB3Q15768 340 aa13.4□□□□□ -0.26
PDZRN3-201ENST00000263666 ZNF295-AS1Q8N0V1 137 aa13.4□□□□□ -0.26
PDZRN3-201ENST00000263666 RPRMLQ8N4K4 120 aa13.4□□□□□ -0.26
PDZRN3-201ENST00000263666 YTHDF2Q9Y5A9 579 aaKnown RBP13.4□□□□□ -0.26
PDZRN3-201ENST00000263666 C10orf142B7Z368 130 aa13.39□□□□□ -0.27
PDZRN3-201ENST00000263666 CHEK1O14757 476 aa13.39□□□□□ -0.27
PDZRN3-201ENST00000263666 KIR2DL2P43627 348 aaPredicted RBP13.39□□□□□ -0.27
PDZRN3-201ENST00000263666 S4R3C0 116 aa13.39□□□□□ -0.27
PDZRN3-201ENST00000263666 IGHV1-18A0A0C4DH31 117 aa13.39□□□□□ -0.27
PDZRN3-201ENST00000263666 C16orf97H3BN30 126 aa13.39□□□□□ -0.27
PDZRN3-201ENST00000263666 PYYP10082 97 aa13.39□□□□□ -0.27
PDZRN3-201ENST00000263666 DAZAP2Q15038 168 aaPredicted RBP13.39□□□□□ -0.27
PDZRN3-201ENST00000263666 LINC00479Q96M42 142 aa13.39□□□□□ -0.27
PDZRN3-201ENST00000263666 NOL4LQ96MY1 436 aaPredicted RBP13.39□□□□□ -0.27
PDZRN3-201ENST00000263666 TMEM167BQ9NRX6 74 aa13.39□□□□□ -0.27
PDZRN3-201ENST00000263666 WDFY3Q8IZQ1 3526 aa13.39□□□□□ -0.27
PDZRN3-201ENST00000263666 TMSB15BA0A087X1C1 80 aa13.39□□□□□ -0.27
PDZRN3-201ENST00000263666 RND2P52198 227 aa13.39□□□□□ -0.27
PDZRN3-201ENST00000263666 SERTM2A0A1B0GWG4 89 aa13.38□□□□□ -0.27
PDZRN3-201ENST00000263666 NDUFB3O43676 98 aa13.38□□□□□ -0.27
PDZRN3-201ENST00000263666 SPACA3Q8IXA5 215 aa13.38□□□□□ -0.27
PDZRN3-201ENST00000263666 SSBP4Q9BWG4 385 aaPredicted RBP13.38□□□□□ -0.27
PDZRN3-201ENST00000263666 SLC25A10Q9UBX3 287 aaPredicted RBP13.38□□□□□ -0.27
PDZRN3-201ENST00000263666 M0R2Z0 102 aa13.38□□□□□ -0.27
PDZRN3-201ENST00000263666 SUB1P53999 127 aaKnown RBP eCLIP13.38□□□□□ -0.27
PDZRN3-201ENST00000263666 DLX1P56177 255 aa13.38□□□□□ -0.27
PDZRN3-201ENST00000263666 TEX38Q6PEX7 206 aa13.38□□□□□ -0.27
PDZRN3-201ENST00000263666 MBNL3Q9NUK0 354 aaKnown RBP13.38□□□□□ -0.27
PDZRN3-201ENST00000263666 JPT1Q9UK76 154 aa13.38□□□□□ -0.27
PDZRN3-201ENST00000263666 ST6GALNAC6Q969X2 333 aa13.38□□□□□ -0.27
PDZRN3-201ENST00000263666 MPDU1O75352 247 aa13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 HINT1P49773 126 aaPredicted RBP13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 LEMD1Q68G75 181 aa13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 PRNDQ9UKY0 176 aa13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 A0A1W2PNU3 283 aaPredicted RBP13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 HSBP1L1C9JCN9 74 aa13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 VENTXO95231 258 aa13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 TCF15Q12870 199 aa13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 NDUFAF3Q9BU61 184 aa13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 IGKV1D-17A0A075B6S4 117 aa13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 IGLV2-14P01704 120 aa13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 BPIFB3P59826 476 aa13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 Q6ZSR3 168 aa13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 TGIF2LYQ8IUE0 185 aa13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 GCSAMQ8N6F7 178 aa13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 C11orf1Q9H5F2 150 aa13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 APCSP02743 223 aa13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 NPPCP23582 126 aa13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 C10orf113Q5VZT2 155 aa13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 AGMATQ9BSE5 352 aa13.37□□□□□ -0.27
PDZRN3-201ENST00000263666 SPTBN4Q9H254 2564 aa13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 BRS3P32247 399 aa13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 GNG5P63218 68 aa13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 SRSF7Q16629 238 aaKnown RBP eCLIP13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 ACSF3Q4G176 576 aaPredicted RBP13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 SPRNQ5BIV9 151 aa13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 ZCCHC14Q8WYQ9 949 aaKnown RBP13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 PAXXQ9BUH6 204 aa13.36□□□□□ -0.27
PDZRN3-201ENST00000263666 TMEM242Q9NWH2 141 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms