RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 NAV3Q8IVL0 2385 aa12.67□□□□□ -0.38
VPS26A-201ENST00000263559 OR13C7P0DN81 318 aa12.66□□□□□ -0.38
VPS26A-201ENST00000263559 CD24P25063 80 aa12.66□□□□□ -0.38
VPS26A-201ENST00000263559 HABP2Q14520 560 aaPredicted RBP12.66□□□□□ -0.38
VPS26A-201ENST00000263559 MLANAQ16655 118 aa12.66□□□□□ -0.38
VPS26A-201ENST00000263559 ZNF787Q6DD87 383 aa12.66□□□□□ -0.38
VPS26A-201ENST00000263559 C17orf50Q8WW18 174 aa12.66□□□□□ -0.38
VPS26A-201ENST00000263559 SLC39A9Q9NUM3 307 aa12.66□□□□□ -0.38
VPS26A-201ENST00000263559 IGHV4-61A0A0C4DH41 118 aa12.66□□□□□ -0.38
VPS26A-201ENST00000263559 COX6B1P14854 86 aa12.66□□□□□ -0.38
VPS26A-201ENST00000263559 GGTLC1Q9BX51 225 aa12.66□□□□□ -0.38
VPS26A-201ENST00000263559 FAM208BQ5VWN6 2430 aa12.66□□□□□ -0.38
VPS26A-201ENST00000263559 MAP1LC3B2A6NCE7 125 aa12.65□□□□□ -0.38
VPS26A-201ENST00000263559 VWC2LB2RUY7 222 aa12.65□□□□□ -0.38
VPS26A-201ENST00000263559 ACTL6BO94805 426 aa12.65□□□□□ -0.38
VPS26A-201ENST00000263559 M6PRP20645 277 aa12.65□□□□□ -0.38
VPS26A-201ENST00000263559 TEPPQ6URK8 271 aa12.65□□□□□ -0.38
VPS26A-201ENST00000263559 MAP1LC3BQ9GZQ8 125 aa12.65□□□□□ -0.38
VPS26A-201ENST00000263559 SLC25A22Q9H936 323 aa12.65□□□□□ -0.38
VPS26A-201ENST00000263559 VPS13CQ709C8 3753 aa12.65□□□□□ -0.38
VPS26A-201ENST00000263559 FNDC10F2Z333 226 aa12.65□□□□□ -0.38
VPS26A-201ENST00000263559 NDUFS8O00217 210 aa12.65□□□□□ -0.38
VPS26A-201ENST00000263559 HMGB3O15347 200 aaKnown RBP12.65□□□□□ -0.38
VPS26A-201ENST00000263559 REG1AP05451 166 aa12.65□□□□□ -0.38
VPS26A-201ENST00000263559 DEFA4P12838 97 aa12.65□□□□□ -0.38
VPS26A-201ENST00000263559 OPRK1P41145 380 aa12.65□□□□□ -0.38
VPS26A-201ENST00000263559 RPL27AP46776 148 aaKnown RBP12.65□□□□□ -0.38
VPS26A-201ENST00000263559 LGALS4P56470 323 aa12.65□□□□□ -0.38
VPS26A-201ENST00000263559 GCSAMLQ5JQS6 135 aa12.65□□□□□ -0.38
VPS26A-201ENST00000263559 MIC13Q5XKP0 118 aa12.65□□□□□ -0.38
VPS26A-201ENST00000263559 CLEC2AQ6UVW9 174 aa12.65□□□□□ -0.38
VPS26A-201ENST00000263559 SVBPQ8N300 66 aa12.65□□□□□ -0.38
VPS26A-201ENST00000263559 PERPQ96FX8 193 aa12.65□□□□□ -0.38
VPS26A-201ENST00000263559 FCN1O00602 326 aa12.65□□□□□ -0.39
VPS26A-201ENST00000263559 MAS1LP35410 378 aa12.65□□□□□ -0.39
VPS26A-201ENST00000263559 COMPP49747 757 aaPredicted RBP12.65□□□□□ -0.39
VPS26A-201ENST00000263559 GNB1P62873 340 aa12.65□□□□□ -0.39
VPS26A-201ENST00000263559 BTN1A1Q13410 526 aa12.65□□□□□ -0.39
VPS26A-201ENST00000263559 ACOT6Q3I5F7 207 aaPredicted RBP12.65□□□□□ -0.39
VPS26A-201ENST00000263559 FBLN7Q53RD9 439 aa12.65□□□□□ -0.39
VPS26A-201ENST00000263559 MINOS1Q5TGZ0 78 aa12.65□□□□□ -0.39
VPS26A-201ENST00000263559 FAM122CQ6P4D5 195 aa12.65□□□□□ -0.39
VPS26A-201ENST00000263559 P2RX4Q99571 388 aa12.65□□□□□ -0.39
VPS26A-201ENST00000263559 POLR3KQ9Y2Y1 108 aaPredicted RBP12.65□□□□□ -0.39
VPS26A-201ENST00000263559 MINOS1-NBL1R4GNA1 71 aa12.65□□□□□ -0.39
VPS26A-201ENST00000263559 ABCA2Q9BZC7 2435 aa12.64□□□□□ -0.39
VPS26A-201ENST00000263559 CTXND1A0A1B0GTU2 59 aa12.64□□□□□ -0.39
VPS26A-201ENST00000263559 IGLC7A0M8Q6 106 aa12.64□□□□□ -0.39
VPS26A-201ENST00000263559 YIF1AO95070 293 aa12.64□□□□□ -0.39
VPS26A-201ENST00000263559 CD69Q07108 199 aa12.64□□□□□ -0.39
VPS26A-201ENST00000263559 MMDQ15546 238 aa12.64□□□□□ -0.39
VPS26A-201ENST00000263559 SSMEM1Q8WWF3 244 aa12.64□□□□□ -0.39
VPS26A-201ENST00000263559 EAF1Q96JC9 268 aaPredicted RBP12.64□□□□□ -0.39
VPS26A-201ENST00000263559 GNG13Q9P2W3 67 aa12.64□□□□□ -0.39
VPS26A-201ENST00000263559 PXMP4Q9Y6I8 212 aa12.64□□□□□ -0.39
VPS26A-201ENST00000263559 IGHV4-30-2A0A087WSY4 118 aa12.64□□□□□ -0.39
VPS26A-201ENST00000263559 MOSP00540 346 aa12.64□□□□□ -0.39
VPS26A-201ENST00000263559 UBE2E1P51965 193 aa12.64□□□□□ -0.39
VPS26A-201ENST00000263559 SSBP2P81877 361 aaPredicted RBP12.64□□□□□ -0.39
VPS26A-201ENST00000263559 GAMTQ14353 236 aa12.64□□□□□ -0.39
VPS26A-201ENST00000263559 PLGLAQ15195 96 aa12.64□□□□□ -0.39
VPS26A-201ENST00000263559 ACTR3CQ9C0K3 210 aaPredicted RBP12.64□□□□□ -0.39
VPS26A-201ENST00000263559 SLC35B3Q9H1N7 401 aa12.64□□□□□ -0.39
VPS26A-201ENST00000263559 LRRK2Q5S007 2527 aa12.63□□□□□ -0.39
VPS26A-201ENST00000263559 CYB5BO43169 146 aa12.63□□□□□ -0.39
VPS26A-201ENST00000263559 SNRNP70P08621 437 aaKnown RBP12.63□□□□□ -0.39
VPS26A-201ENST00000263559 APELAP0DMC3 54 aa12.63□□□□□ -0.39
VPS26A-201ENST00000263559 SUB1P53999 127 aaKnown RBP eCLIP12.63□□□□□ -0.398e-6■■■□□ 15.3
VPS26A-201ENST00000263559 ICAM4Q14773 271 aa12.63□□□□□ -0.39
VPS26A-201ENST00000263559 ZNF506Q5JVG8 444 aa12.63□□□□□ -0.39
VPS26A-201ENST00000263559 CCDC144NLQ6NUI1 221 aa12.63□□□□□ -0.39
VPS26A-201ENST00000263559 RAB24Q969Q5 203 aa12.63□□□□□ -0.39
VPS26A-201ENST00000263559 NKX6-2Q9C056 277 aaPredicted RBP12.63□□□□□ -0.39
VPS26A-201ENST00000263559 SMDT1Q9H4I9 107 aa12.63□□□□□ -0.39
VPS26A-201ENST00000263559 OOSP1A8MZH6 123 aa12.63□□□□□ -0.39
VPS26A-201ENST00000263559 HES1Q14469 280 aa12.63□□□□□ -0.39
VPS26A-201ENST00000263559 TMEM144Q7Z5S9 345 aa12.63□□□□□ -0.39
VPS26A-201ENST00000263559 RXFP4Q8TDU9 374 aa12.63□□□□□ -0.39
VPS26A-201ENST00000263559 IGKV1OR2-108A0A075B7D4 117 aa12.62□□□□□ -0.39
VPS26A-201ENST00000263559 ZFP92A6NM28 416 aa12.62□□□□□ -0.39
VPS26A-201ENST00000263559 NBR2O15453 112 aa12.62□□□□□ -0.39
VPS26A-201ENST00000263559 SOX15O60248 233 aa12.62□□□□□ -0.39
VPS26A-201ENST00000263559 AREGP15514 252 aa12.62□□□□□ -0.39
VPS26A-201ENST00000263559 FBP1P09467 338 aa12.62□□□□□ -0.39
VPS26A-201ENST00000263559 RAB31Q13636 194 aa12.62□□□□□ -0.39
VPS26A-201ENST00000263559 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.62□□□□□ -0.39
VPS26A-201ENST00000263559 NPBQ8NG41 125 aa12.62□□□□□ -0.39
VPS26A-201ENST00000263559 OR2T6Q8NHC8 308 aa12.62□□□□□ -0.39
VPS26A-201ENST00000263559 CACNG8Q8WXS5 425 aa12.62□□□□□ -0.39
VPS26A-201ENST00000263559 AJUBAQ96IF1 538 aa12.62□□□□□ -0.39
VPS26A-201ENST00000263559 TMPRSS5Q9H3S3 457 aa12.62□□□□□ -0.39
VPS26A-201ENST00000263559 FNDC4Q9H6D8 234 aaPredicted RBP12.62□□□□□ -0.39
VPS26A-201ENST00000263559 TBL2Q9Y4P3 447 aaKnown RBP12.62□□□□□ -0.39
VPS26A-201ENST00000263559 LOC102723971A0A1B0GUV8 181 aa12.61□□□□□ -0.39
VPS26A-201ENST00000263559 TEX22C9J3V5 150 aa12.61□□□□□ -0.39
VPS26A-201ENST00000263559 SRP19P09132 144 aaKnown RBP12.61□□□□□ -0.39
VPS26A-201ENST00000263559 GPX4P36969 197 aaPredicted RBP12.61□□□□□ -0.39
VPS26A-201ENST00000263559 CDC34P49427 236 aaPredicted RBP12.61□□□□□ -0.39
VPS26A-201ENST00000263559 B2MP61769 119 aa12.61□□□□□ -0.39
VPS26A-201ENST00000263559 KHDC3LQ587J8 217 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms