RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 PHF3Q92576 2039 aaKnown RBP7.07□□□□□ -1.28
LDB3-201ENST00000263066 BOD1L1Q8NFC6 3051 aa7.07□□□□□ -1.28
LDB3-201ENST00000263066 C9orf118A6NHY6 69 aa7.07□□□□□ -1.28
LDB3-201ENST00000263066 SRSF10O75494 262 aaKnown RBP7.07□□□□□ -1.28
LDB3-201ENST00000263066 TUSC2O75896 110 aa7.07□□□□□ -1.28
LDB3-201ENST00000263066 ZFP36L1Q07352 338 aaKnown RBP7.07□□□□□ -1.28
LDB3-201ENST00000263066 FAM162BQ5T6X4 162 aa7.07□□□□□ -1.28
LDB3-201ENST00000263066 ZFAND6Q6FIF0 208 aa7.07□□□□□ -1.28
LDB3-201ENST00000263066 ZNF611Q8N823 705 aa7.07□□□□□ -1.28
LDB3-201ENST00000263066 FAM169BQ8N8A8 192 aa7.07□□□□□ -1.28
LDB3-201ENST00000263066 WDR34Q96EX3 536 aa7.07□□□□□ -1.28
LDB3-201ENST00000263066 TPPP3Q9BW30 176 aa7.07□□□□□ -1.28
LDB3-201ENST00000263066 SSBP3Q9BWW4 388 aaPredicted RBP7.07□□□□□ -1.28
LDB3-201ENST00000263066 OBP2BQ9NPH6 170 aa7.07□□□□□ -1.28
LDB3-201ENST00000263066 MTORP42345 2549 aa7.07□□□□□ -1.28
LDB3-201ENST00000263066 NAV2Q8IVL1 2488 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 DEGS1O15121 323 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 ACTL6BO94805 426 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 PPYP01298 95 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 HBZP02008 142 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 CELA3BP08861 270 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 SMIM17P0DL12 118 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 ZNF137PP52743 207 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 EMC4Q5J8M3 183 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 AAED1Q7RTV5 226 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 TPRX1Q8N7U7 411 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 OCC1Q8TAD7 63 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 ZNF721Q8TF20 911 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 PIGLQ9Y2B2 252 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 LOC102723996A0A087X1L8 192 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 TRAV1-1A0A0B4J248 108 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 C5orf49A4QMS7 147 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 PRR19A6NJB7 356 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 TMEM14DPA8MWL7 114 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 ATP5J2P56134 94 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 RPL8P62917 257 aaKnown RBP7.06□□□□□ -1.28
LDB3-201ENST00000263066 SPATA31B1PQ5VZV4 182 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 FAM166AQ6J272 317 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 SFTA2Q6UW10 78 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 NHLRC2Q8NBF2 726 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 MRPL27Q9P0M9 148 aaKnown RBP7.06□□□□□ -1.28
LDB3-201ENST00000263066 RNF114Q9Y508 228 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 TRBV20-1A0A075B6N2 111 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 PRRG2O14669 202 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 CT45A6P0DMU7 189 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 CT45A5P0DMU8 189 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 CT45A7P0DMV0 189 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 ZNF121P58317 390 aaPredicted RBP7.06□□□□□ -1.28
LDB3-201ENST00000263066 CT45A1Q5HYN5 189 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 RNFT1Q5M7Z0 435 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 LHFPL1Q86WI0 220 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 SYT8Q8NBV8 401 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 CT45A3Q8NHU0 189 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 OR2V2Q96R30 315 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 PIMREGQ9BSJ6 248 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 VCX2Q9H322 139 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 ABCA12Q86UK0 2595 aa7.06□□□□□ -1.28
LDB3-201ENST00000263066 TMSB15BA0A087X1C1 80 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 SCO2A0A1W2PP80 73 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 H0Y980 276 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 IGKV1D-16P01601 117 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 PRDX4Q13162 271 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 RPP25LQ8N5L8 163 aaKnown RBP7.05□□□□□ -1.28
LDB3-201ENST00000263066 ZNF418Q8TF45 676 aaPredicted RBP7.05□□□□□ -1.28
LDB3-201ENST00000263066 MBD3L1Q8WWY6 194 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 ARPC1AQ92747 370 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 CYYR1Q96J86 154 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 SIGLEC12Q96PQ1 595 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 TMEM222Q9H0R3 208 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 NHP2Q9NX24 153 aaKnown RBP7.05□□□□□ -1.28
LDB3-201ENST00000263066 NPIPB5A8MRT5 1133 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 AMY1AP04745 511 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 F2RP25116 425 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 CTRLP40313 264 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 ALKBH6Q3KRA9 238 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 TIMM23BQ5SRD1 257 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 ZDHHC23Q8IYP9 409 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 PLPPR1Q8TBJ4 325 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 UCN2Q96RP3 112 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 CCL28Q9NRJ3 127 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 SLC7A10Q9NS82 523 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 YTHDF2Q9Y5A9 579 aaKnown RBP7.05□□□□□ -1.28
LDB3-201ENST00000263066 A0A0A6YYD4 124 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 TRGV5A0A0B4J1U4 118 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 TRBV9A0A0B4J1U6 114 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 LOC107984156A0A0G2JMH3 177 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 PSMB11A5LHX3 300 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 SH2D7A6NKC9 451 aaPredicted RBP7.05□□□□□ -1.28
LDB3-201ENST00000263066 ASAH2BP0C7U1 165 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 CFHR2P36980 270 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 CSN1S1P47710 185 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 YLPM1P49750 1951 aaKnown RBP7.05□□□□□ -1.28
LDB3-201ENST00000263066 Q0VG73 95 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 ARL17AQ8IVW1 177 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 LRTM2Q8N967 370 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 ZIC4Q8N9L1 334 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 UBALD1Q8TB05 177 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 NGBQ9NPG2 151 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 PSG8Q9UQ74 426 aa7.05□□□□□ -1.28
LDB3-201ENST00000263066 KLF13Q9Y2Y9 288 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms