RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 ITGB1BP1O14713 200 aa13.35□□□□□ -0.27
TM9SF1-201ENST00000261789 GATA4P43694 442 aa13.35□□□□□ -0.27
TM9SF1-201ENST00000261789 DOLPP1Q86YN1 238 aa13.35□□□□□ -0.27
TM9SF1-201ENST00000261789 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.35□□□□□ -0.27
TM9SF1-201ENST00000261789 TP53TG3Q9ULZ0 132 aa13.35□□□□□ -0.27
TM9SF1-201ENST00000261789 SLC45A2Q9UMX9 530 aa13.35□□□□□ -0.27
TM9SF1-201ENST00000261789 ANKRD11Q6UB99 2663 aaPredicted RBP13.35□□□□□ -0.27
TM9SF1-201ENST00000261789 ZNF292O60281 2723 aa13.35□□□□□ -0.27
TM9SF1-201ENST00000261789 RELNP78509 3460 aa13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 UPK2O00526 184 aa13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 OR7C2O60412 319 aa13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 OR10J1P30954 320 aa13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 ERVFC1-1P60608 527 aa13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 KRTCAP3Q53RY4 240 aa13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 ZNF788Q6ZQV5 615 aa13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 FKBP11Q9NYL4 201 aa13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 IL19Q9UHD0 177 aa13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 CSMD1Q96PZ7 3565 aa13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 NAV3Q8IVL0 2385 aa13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 E7EUB6 86 aa13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 F2Z2F3 143 aa13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 ZZEF1O43149 2961 aa13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 SAA1P0DJI8 122 aaPredicted RBP13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 SLC35B1P78383 322 aa13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 PRCDQ00LT1 54 aa13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 USF2Q15853 346 aaPredicted RBP13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 RNASE7Q9H1E1 156 aaKnown RBP13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 IL36BQ9NZH7 164 aa13.34□□□□□ -0.27
TM9SF1-201ENST00000261789 CEACAM4O75871 244 aa13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 IGHV3-48P01763 117 aa13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 CCL3L1P16619 93 aa13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 CCKARP32238 428 aa13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 IER3P46695 156 aa13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 YPEL3P61236 119 aaPredicted RBP13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 CENPWQ5EE01 88 aa13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 PQLC2Q6ZP29 291 aa13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 SLC25A48Q6ZT89 311 aaKnown RBP13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 UHRF2Q96PU4 802 aa13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 RPUSD1Q9UJJ7 312 aaKnown RBP13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 PRNDQ9UKY0 176 aa13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 SPTBN2O15020 2390 aa13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 MT-CO2P00403 227 aa13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 LINC00310P59036 64 aa13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 SELENOVP59797 346 aa13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 FXYD3Q14802 87 aa13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 MORN5Q5VZ52 161 aa13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 C11orf52Q96A22 123 aa13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 ADTRPQ96IZ2 230 aa13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 MS4A10Q96PG2 267 aa13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 MRPL18Q9H0U6 180 aaKnown RBP13.33□□□□□ -0.28
TM9SF1-201ENST00000261789 HELTA6NFD8 242 aa13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 CD40P25942 277 aa13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 IQCJQ1A5X6 159 aa13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 C1orf185Q5T7R7 199 aa13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 ZGRF1Q86YA3 2104 aa13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 OR8I2Q8N0Y5 310 aa13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 PRSS33Q8NF86 280 aa13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 OR1L6Q8NGR2 347 aa13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 OR2T6Q8NHC8 308 aa13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 NOL4LQ96MY1 436 aaPredicted RBP13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 GGTLC3B5MD39 225 aa13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 CHRNB4P30926 498 aa13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 GNG4P50150 75 aa13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 DIAPH2-AS1Q14236 149 aa13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 POU2AF1Q16633 256 aa13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 RTL8BQ17RB0 113 aa13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 MMD2Q8IY49 270 aa13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 NDUFAF3Q9BU61 184 aa13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 MRPL20Q9BYC9 149 aaKnown RBP13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 V9GYV3 84 aa13.32□□□□□ -0.28
TM9SF1-201ENST00000261789 TRAV5A0A0B4J249 113 aa13.31□□□□□ -0.28
TM9SF1-201ENST00000261789 FCN1O00602 326 aa13.31□□□□□ -0.28
TM9SF1-201ENST00000261789 FCN3O75636 299 aa13.31□□□□□ -0.28
TM9SF1-201ENST00000261789 LGALS4P56470 323 aa13.31□□□□□ -0.28
TM9SF1-201ENST00000261789 SUMO1P63165 101 aaKnown RBP13.31□□□□□ -0.28
TM9SF1-201ENST00000261789 SSBP2P81877 361 aaPredicted RBP13.31□□□□□ -0.28
TM9SF1-201ENST00000261789 CMTM2Q8TAZ6 248 aa13.31□□□□□ -0.28
TM9SF1-201ENST00000261789 NCOR1P1Q9H4R4 102 aa13.31□□□□□ -0.28
TM9SF1-201ENST00000261789 RAB9BQ9NP90 201 aa13.31□□□□□ -0.28
TM9SF1-201ENST00000261789 POLR3KQ9Y2Y1 108 aaPredicted RBP13.31□□□□□ -0.28
TM9SF1-201ENST00000261789 ZFHX2Q9C0A1 2572 aaPredicted RBP13.31□□□□□ -0.28
TM9SF1-201ENST00000261789 AREGP15514 252 aa13.31□□□□□ -0.28
TM9SF1-201ENST00000261789 TCL1AP56279 114 aa13.31□□□□□ -0.28
TM9SF1-201ENST00000261789 RAB4BP61018 213 aa13.31□□□□□ -0.28
TM9SF1-201ENST00000261789 BTF3L4Q96K17 158 aa13.31□□□□□ -0.28
TM9SF1-201ENST00000261789 SNURFLB1AK76 121 aa13.3□□□□□ -0.28
TM9SF1-201ENST00000261789 C9JCJ5 164 aa13.3□□□□□ -0.28
TM9SF1-201ENST00000261789 SERF1AO75920 110 aa13.3□□□□□ -0.28
TM9SF1-201ENST00000261789 RNASE2P10153 161 aaKnown RBP13.3□□□□□ -0.28
TM9SF1-201ENST00000261789 IRF2P14316 349 aa13.3□□□□□ -0.28
TM9SF1-201ENST00000261789 NHLRC2Q8NBF2 726 aa13.3□□□□□ -0.28
TM9SF1-201ENST00000261789 ST6GALNAC3Q8NDV1 305 aa13.3□□□□□ -0.28
TM9SF1-201ENST00000261789 CBLN4Q9NTU7 201 aa13.3□□□□□ -0.28
TM9SF1-201ENST00000261789 ZNF257Q9Y2Q1 563 aa13.3□□□□□ -0.28
TM9SF1-201ENST00000261789 A8MXE2 369 aa13.3□□□□□ -0.28
TM9SF1-201ENST00000261789 EREGO14944 169 aa13.3□□□□□ -0.28
TM9SF1-201ENST00000261789 CRISP2P16562 243 aa13.3□□□□□ -0.28
TM9SF1-201ENST00000261789 RPEL1Q2QD12 228 aa13.3□□□□□ -0.28
TM9SF1-201ENST00000261789 TDRG1Q3Y452 100 aa13.3□□□□□ -0.28
TM9SF1-201ENST00000261789 C10orf55Q5SWW7 151 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms