RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 GGTLC3B5MD39 225 aa13.09□□□□□ -0.31
LMNB1-201ENST00000261366 CAMPP49913 170 aa13.09□□□□□ -0.31
LMNB1-201ENST00000261366 NABP2Q9BQ15 211 aa13.09□□□□□ -0.31
LMNB1-201ENST00000261366 ASCL3Q9NQ33 180 aa13.09□□□□□ -0.31
LMNB1-201ENST00000261366 LSM4Q9Y4Z0 139 aaKnown RBP13.09□□□□□ -0.31
LMNB1-201ENST00000261366 APCSP02743 223 aa13.08□□□□□ -0.32
LMNB1-201ENST00000261366 IGHV1-2P23083 117 aa13.08□□□□□ -0.32
LMNB1-201ENST00000261366 RAB31Q13636 194 aa13.08□□□□□ -0.32
LMNB1-201ENST00000261366 PMCHL1Q16048 86 aa13.08□□□□□ -0.32
LMNB1-201ENST00000261366 TMEM249Q2WGJ8 235 aa13.08□□□□□ -0.32
LMNB1-201ENST00000261366 MORN2Q502X0 79 aa13.08□□□□□ -0.32
LMNB1-201ENST00000261366 ZNF355PQ9NSJ1 428 aa13.08□□□□□ -0.32
LMNB1-201ENST00000261366 TRAV5A0A0B4J249 113 aa13.08□□□□□ -0.32
LMNB1-201ENST00000261366 A0A1W2PN81 502 aa13.08□□□□□ -0.32
LMNB1-201ENST00000261366 C15orf65H3BRN8 121 aa13.08□□□□□ -0.32
LMNB1-201ENST00000261366 CD24P25063 80 aa13.08□□□□□ -0.32
LMNB1-201ENST00000261366 FAM201AQ5SY85 155 aa13.08□□□□□ -0.32
LMNB1-201ENST00000261366 RNASEKQ6P5S7 137 aaKnown RBP13.08□□□□□ -0.32
LMNB1-201ENST00000261366 IL19Q9UHD0 177 aa13.08□□□□□ -0.32
LMNB1-201ENST00000261366 CEP250Q9BV73 2442 aa13.07□□□□□ -0.32
LMNB1-201ENST00000261366 IQCF6A8MYZ5 107 aa13.07□□□□□ -0.32
LMNB1-201ENST00000261366 C9JCJ5 164 aa13.07□□□□□ -0.32
LMNB1-201ENST00000261366 TNXAQ16473 311 aa13.07□□□□□ -0.32
LMNB1-201ENST00000261366 LHFPL4Q7Z7J7 247 aa13.07□□□□□ -0.32
LMNB1-201ENST00000261366 HES4Q9HCC6 221 aa13.07□□□□□ -0.32
LMNB1-201ENST00000261366 RNF24Q9Y225 148 aa13.07□□□□□ -0.32
LMNB1-201ENST00000261366 TIMM8BQ9Y5J9 83 aaPredicted RBP13.07□□□□□ -0.32
LMNB1-201ENST00000261366 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.07□□□□□ -0.32
LMNB1-201ENST00000261366 HSBP1O75506 76 aa13.07□□□□□ -0.32
LMNB1-201ENST00000261366 PRDX2P32119 198 aa13.07□□□□□ -0.32
LMNB1-201ENST00000261366 MFAP2P55001 183 aa13.07□□□□□ -0.32
LMNB1-201ENST00000261366 RPL8P62917 257 aaKnown RBP13.07□□□□□ -0.32
LMNB1-201ENST00000261366 ATP1A1-AS1Q5TC04 95 aa13.07□□□□□ -0.32
LMNB1-201ENST00000261366 STUMQ69YW2 141 aa13.07□□□□□ -0.32
LMNB1-201ENST00000261366 PCNX2A6NKB5 2137 aa13.07□□□□□ -0.32
LMNB1-201ENST00000261366 M0QZ24 198 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 SP1P08047 785 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 PRRX1P54821 245 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 SMIM21Q3B7S5 101 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 RNFT1Q5M7Z0 435 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 WDR73Q6P4I2 378 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 MRPL52Q86TS9 123 aaKnown RBP13.06□□□□□ -0.32
LMNB1-201ENST00000261366 ZNF439Q8NDP4 499 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 OR2Z1Q8NG97 314 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 ZNF331Q9NQX6 463 aaPredicted RBP13.06□□□□□ -0.32
LMNB1-201ENST00000261366 ZNRD1Q9P1U0 126 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 YLPM1P49750 1951 aaKnown RBP13.06□□□□□ -0.32
LMNB1-201ENST00000261366 IGKV1OR2-108A0A075B7D4 117 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 SH2D7A6NKC9 451 aaPredicted RBP13.06□□□□□ -0.32
LMNB1-201ENST00000261366 CRYABP02511 175 aaKnown RBP13.06□□□□□ -0.32
LMNB1-201ENST00000261366 AMY1AP04745 511 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 TSPOP30536 169 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 OR4A47Q6IF82 309 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 ETFRF1Q6IPR1 90 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 C11orf52Q96A22 123 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 ZNF503Q96F45 646 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 SPRR3Q9UBC9 169 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 WISP2O76076 250 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 MORN5Q5VZ52 161 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 FAM214BQ7L5A3 538 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 KIR3DL3Q8N743 410 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 OR9G1Q8NH87 305 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 CLEC5AQ9NY25 188 aa13.06□□□□□ -0.32
LMNB1-201ENST00000261366 TRAV9-1A0A075B6T8 112 aa13.05□□□□□ -0.32
LMNB1-201ENST00000261366 M0R2Z0 102 aa13.05□□□□□ -0.32
LMNB1-201ENST00000261366 CEACAM8P31997 349 aaPredicted RBP13.05□□□□□ -0.32
LMNB1-201ENST00000261366 TCTEX1D1Q8N7M0 179 aa13.05□□□□□ -0.32
LMNB1-201ENST00000261366 CXXC4Q9H2H0 198 aa13.05□□□□□ -0.32
LMNB1-201ENST00000261366 TECRQ9NZ01 308 aaKnown RBP13.05□□□□□ -0.32
LMNB1-201ENST00000261366 RPH3ALQ9UNE2 315 aa13.05□□□□□ -0.32
LMNB1-201ENST00000261366 TTC28Q96AY4 2481 aa13.05□□□□□ -0.32
LMNB1-201ENST00000261366 H0Y8G0 127 aa13.05□□□□□ -0.32
LMNB1-201ENST00000261366 ADH4P08319 380 aa13.05□□□□□ -0.32
LMNB1-201ENST00000261366 LINC00869P0C866 280 aa13.05□□□□□ -0.32
LMNB1-201ENST00000261366 SP9P0CG40 484 aa13.05□□□□□ -0.32
LMNB1-201ENST00000261366 OR10J3Q5JRS4 329 aa13.05□□□□□ -0.32
LMNB1-201ENST00000261366 TRAT1Q6PIZ9 186 aa13.05□□□□□ -0.32
LMNB1-201ENST00000261366 LYG1Q8N1E2 194 aa13.05□□□□□ -0.32
LMNB1-201ENST00000261366 C18orf32Q8TCD1 76 aa13.05□□□□□ -0.32
LMNB1-201ENST00000261366 ABI3Q9P2A4 366 aa13.05□□□□□ -0.32
LMNB1-201ENST00000261366 TRBV9A0A0B4J1U6 114 aa13.04□□□□□ -0.32
LMNB1-201ENST00000261366 C9orf172C9J069 976 aa13.04□□□□□ -0.32
LMNB1-201ENST00000261366 PLAUP00749 431 aa13.04□□□□□ -0.32
LMNB1-201ENST00000261366 MT-ND6P03923 174 aa13.04□□□□□ -0.32
LMNB1-201ENST00000261366 AREGP15514 252 aa13.04□□□□□ -0.32
LMNB1-201ENST00000261366 RPL19P84098 196 aaKnown RBP13.04□□□□□ -0.32
LMNB1-201ENST00000261366 GABRA6Q16445 453 aa13.04□□□□□ -0.32
LMNB1-201ENST00000261366 LEMD1Q68G75 181 aa13.04□□□□□ -0.32
LMNB1-201ENST00000261366 IFI27L2Q9H2X8 130 aa13.04□□□□□ -0.32
LMNB1-201ENST00000261366 PTPRBP23467 1997 aa13.04□□□□□ -0.32
LMNB1-201ENST00000261366 M0R296 226 aa13.04□□□□□ -0.32
LMNB1-201ENST00000261366 CD46P15529 392 aa13.04□□□□□ -0.32
LMNB1-201ENST00000261366 SPRNQ5BIV9 151 aa13.04□□□□□ -0.32
LMNB1-201ENST00000261366 WDR31Q8NA23 367 aa13.04□□□□□ -0.32
LMNB1-201ENST00000261366 OR52E5Q8NH55 327 aa13.04□□□□□ -0.32
LMNB1-201ENST00000261366 MCRIP2Q9BUT9 160 aaKnown RBP13.04□□□□□ -0.32
LMNB1-201ENST00000261366 A0A1W2PNU3 283 aaPredicted RBP13.03□□□□□ -0.32
LMNB1-201ENST00000261366 C15orf61A6NNL5 157 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 PYYP10082 97 aa13.03□□□□□ -0.32
LMNB1-201ENST00000261366 PRB4P10163 310 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms