RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 ROBO3Q96MS0 1386 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 CIB3Q96Q77 187 aaPredicted RBP2.74□□□□□ -1.97
CCDC54-201ENST00000261058 OR2A7Q96R45 310 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 OR4C12Q96R67 309 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 HSD17B10Q99714 261 aaKnown RBP2.74□□□□□ -1.97
CCDC54-201ENST00000261058 GABARAPL3Q9BY60 117 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 TMEM222Q9H0R3 208 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 BANF2Q9H503 90 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 TMEM100Q9NV29 134 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 LAMTOR3Q9UHA4 124 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 TRMT112Q9UI30 125 aaKnown RBP2.74□□□□□ -1.97
CCDC54-201ENST00000261058 POMPQ9Y244 141 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 PLXND1Q9Y4D7 1925 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 HES2Q9Y543 173 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 HEBP2Q9Y5Z4 205 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 ANKRD50Q9ULJ7 1429 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 KIF20BQ96Q89 1820 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 ZC3H13Q5T200 1668 aaKnown RBP2.73□□□□□ -1.97
CCDC54-201ENST00000261058 CDK13Q14004 1512 aaKnown RBP2.73□□□□□ -1.97
CCDC54-201ENST00000261058 CLASP1Q7Z460 1538 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 DUOX2Q9NRD8 1548 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 MYOM2P54296 1465 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 DISP2A7MBM2 1401 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 SPAARA0A1B0GVQ0 90 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 A0A1B0GW64 132 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 BBIP1A8MTZ0 92 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 ZNF705GA8MUZ8 300 aaPredicted RBP2.73□□□□□ -1.97
CCDC54-201ENST00000261058 H0YJW9 148 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 H7BYZ3 331 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 ARL6IP5O75915 188 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 BGLAPP02818 100 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 ATP5G1P05496 136 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 CD14P08571 375 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 CECR9P0C854 216 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 CD70P32970 193 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 CXCL5P42830 114 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 NDUFA8P51970 172 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 ZNF138P52744 262 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 TPPP2P59282 170 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 C1DQ13901 141 aaKnown RBP2.73□□□□□ -1.97
CCDC54-201ENST00000261058 TMEM183BQ1AE95 376 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 IBA57Q5T440 356 aaKnown RBP2.73□□□□□ -1.97
CCDC54-201ENST00000261058 NXNL2Q5VZ03 156 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 ALKAL2Q6UX46 152 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 LRP11Q86VZ4 500 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 TMEM183AQ8IXX5 376 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 ZCCHC24Q8N2G6 241 aaKnown RBP2.73□□□□□ -1.97
CCDC54-201ENST00000261058 SLC25A45Q8N413 288 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 OR2M3Q8NG83 312 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 CT55Q8WUE5 264 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 MAGOHBQ96A72 148 aaKnown RBP2.73□□□□□ -1.97
CCDC54-201ENST00000261058 SPACA5Q96QH8 159 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 PRSS27Q9BQR3 290 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 GGTLC1Q9BX51 225 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 DPY30Q9C005 99 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 SLC25A31Q9H0C2 315 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 ATG5Q9H1Y0 275 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 KLK12Q9UKR0 248 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 MED31Q9Y3C7 131 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 MRPS16Q9Y3D3 137 aaKnown RBP2.73□□□□□ -1.97
CCDC54-201ENST00000261058 ITGB4P16144 1822 aa2.73□□□□□ -1.97
CCDC54-201ENST00000261058 BCORL1Q5H9F3 1711 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 KIF14Q15058 1648 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 DISP1Q96F81 1524 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 PLA2R1Q13018 1463 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 MIA3Q5JRA6 1907 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 IGHV1-69DA0A0B4J2H0 117 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 IGHV1-69-2A0A0G2JMI3 117 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 LOC102725191A0A1B0GVB3 256 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 DHRS12A0PJE2 317 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 MYBPHLA2RUH7 354 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 OR4C45A6NMZ5 311 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 RIIAD1A6NNX1 92 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 ZNF850A8MQ14 1090 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 B4DEV8 164 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 K7EQS6 105 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 NPFFO15130 113 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 SOD3P08294 240 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 SPINK8P0C7L1 97 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 IGLC1P0CG04 106 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 ZNF728P0DKX0 622 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 LINC00694P0DN24 101 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 CPMP14384 443 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 FABP4P15090 132 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 CXCL2P19875 107 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 CXCL3P19876 107 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 ZNF136P52737 540 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 CCL23P55773 120 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 CRADDP78560 199 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 FABP5Q01469 135 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 PRDX4Q13162 271 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 FAM201AQ5SY85 155 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 DEFB125Q8N687 156 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 TEX29Q8N6K0 151 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 NUP35Q8NFH5 326 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 OR8S1Q8NH09 359 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 FNDC9Q8TBE3 224 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 STARD4Q96DR4 205 aa2.72□□□□□ -1.97
CCDC54-201ENST00000261058 ADAT1Q9BUB4 502 aaKnown RBP2.72□□□□□ -1.97
CCDC54-201ENST00000261058 LINC00597Q9H2U6 94 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms